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25 protocols using dmem ham s f 12

1

Culturing Breast Cancer Cell Lines

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MCF10A and MCF10DCIS.com [37 ] cells were cultured in Ham's F12/DMEM (Cellgro) supplemented with 5% equine serum (Cellgro), 500ng/ml hydrocortisone (Sigma-Aldrich), 100ng/ml cholera toxin (List Biological Laboratories), 20ng/ml EGF (R&D Systems) and 10ug/ml insulin. SKBR3 cells were maintained in 10% FBS/McCoy's (Cellgro). MCF7, and MDA-MB-468, MDA-MB-453, MDA-MB-231 cells were maintained in Dulbecco's modified Eagle medium (DMEM; Cellgro) supplemented with 10% Fetal Bovine Serum (FBS; Cyclone). T47D and BT549 cells were cultured in 10% FBS/DMEM, supplemented with 1mg/ml insulin (Sigma-Aldrich). SUM159-PT cells were grown in Ham's F12 medium (Cellgro) supplemented with 5% FBS, 1ug/ml hydrocortisone (Sigma-Aldrich) and 5ug/ml insulin (Sigma-Aldrich). ZR75-1 and HCC1806 were maintained in RPMI 1640 supplemented with 10% FBS (Cellgro). MCF10A-Src inducible cell lines were cultured as previously described [17 (link)]. For all western blotting, cells were lysed in RIPA buffer with protease and phosphatase inhibitors.
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2

Isolation of Primary Mammary Cells

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Tumor tissue was removed aseptically, minced and digested with hyaluronidase (300 U/ML) (EMD Chemicals, Gibbstown, NJ) and collagenase (2 mg/ml) (Worthington Biochemical Corporation, Lakewood, NJ) added to growth medium: Ham’s F12:DMEM (Corning Cellgro, Manassas, VA) supplemented with 5% FCS (Atlanta Biologicals, Lawrenceville, GA), insulin (10 μg/ml), EGF (10 ng/ml), transferrin (10 ug/ml) (Lonza, Walkersville, Maryland) and hydrocortisone (10 S (Atlanta Biologicals, Lawrenceville, GA), ins and incubated for 2 hours at 37°C. Normal primary mammary cells were isolated from inguinal glands 4 and 9 and digested as above for 30 min at 37°C. Primary epithelial cells or carcinoma cells were then isolated by centrifugation and plated in growth medium30 (link),54 (link). Growth medium was supplemented with Penicillin/Streptomicin/Gentamicin (Thermo Scientific, Logan, UT).
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3

Isolation of Primary Mammary Cells

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Tumor tissue was removed aseptically, minced and digested with hyaluronidase (300 U/ML) (EMD Chemicals, Gibbstown, NJ) and collagenase (2 mg/ml) (Worthington Biochemical Corporation, Lakewood, NJ) added to growth medium: Ham’s F12:DMEM (Corning Cellgro, Manassas, VA) supplemented with 5% FCS (Atlanta Biologicals, Lawrenceville, GA), insulin (10 μg/ml), EGF (10 ng/ml), transferrin (10 ug/ml) (Lonza, Walkersville, Maryland) and hydrocortisone (10 S (Atlanta Biologicals, Lawrenceville, GA), ins and incubated for 2 hours at 37°C. Normal primary mammary cells were isolated from inguinal glands 4 and 9 and digested as above for 30 min at 37°C. Primary epithelial cells or carcinoma cells were then isolated by centrifugation and plated in growth medium30 (link),54 (link). Growth medium was supplemented with Penicillin/Streptomicin/Gentamicin (Thermo Scientific, Logan, UT).
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4

Culturing Breast Cancer Mammospheres

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Human breast cancer cells (MCF7 cells) (ATCC, Manassas, VA, USA) were cultured in Dulbecco's modified Eagle's medium (DMEM) (Welgen, Daegu, Korea) supplemented with 10% fetal bovine serum (FBS; JR Scientific, Inc., Woodland, CA, USA) and 1% penicillin/streptomycin at 37°C in a 5% CO2 incubator. For collecting mammospheres, cells were trypsinized and cultured at 37°C in serum-free DMEM/Ham's F12 (Cellgro; Corning Incorporated, Corning, NY, USA) with epidermal growth factor (EGF) and basic fibroblast growth factor (bFGF) (R&D Systems, Inc.) (10 ng/ml each). Mammospheres were collected following three passages of culture.
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5

Isolation of Primary Chondrocytes

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Primary ACs were isolated from pooled femoral head articular cartilage samples using collagenase D (1.5 mg/ml, Roche Diagnostics, Indianapolis, USA) in DMEM/Ham’s F-12 (Cellgro, Manassas, USA) supplemented with 10% heat-inactivated fetal bovine serum and 1% penicillin/streptomycin in a humidified incubator with 5% CO2 at 37°C. Due to the uneven growth rate and cell density of primary chondrocytes (designated as P0), chondrocytes passaged once (P1) were used for various treatments. Cells were seeded in 12-well tissue culture plates at 1 × 105 cells/well for specific experiments.
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Culturing and Characterizing Breast Cancer Cells

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MCF10A, MDA-MB-231, T47D, and ZR-75-1 cells were obtained from the American Type Culture Collection (ATCC) and authenticated using short tandem repeat (STR) profiling. No cell lines used in this study were found in the database of commonly misidentified cell lines that is maintained by ICLAC and NCBI Biosample. MCF10A cells were maintained in DMEM/Ham’s F12 (CellGro) supplemented with 5% equine serum (CellGro), 10 mg/mL insulin (Life Technologies), 500 ng/mL hydrocortisone (Sigma-Aldrich), 20 ng/mL EGF (R&D Systems), and 100 ng/mL cholera toxin (Sigma-Aldrich). MDA-MB-231 cells were maintained in DMEM (CellGro) supplemented with 10% fetal bovine serum (FBS) (Gemini). T47D cells were maintained in RPMI 1640 (CellGro) supplemented with 10% FBS (Gemini) and 10 mg/mL insulin (Life Technologies). ZR-75-1 cells were maintained in RPMI 1640 (CellGro) supplemented with 10% FBS (Gemini). DMEM lacking glucose, glutamine, and pyruvate was obtained from CellGro. Cells were passaged for no more than 6 months and routinely assayed for mycoplasma contamination.
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7

Three-Dimensional MCF10A Breast Cell Culture

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MCF10A cells were grown in three-dimensional Matrigel cultures as previously described (16 (link)). Briefly, chambers slides were coated with growth factor-reduced Matrigel (BD Biosciences) and allowed to solidify for 30 minutes. 3×103 cells suspended in assay media containing 2% Matrigel were overlayed on coated chamber slides. Assay medium contained DMEM/Ham’s F12 (Cellgro) supplemented with 2% equine serum (Cellgro), 10ug/ml insulin (Sigma-Aldrich), 500ng/ml hydrocortisone (Sigma-Aldrich), 5ng/ml EGF (R&D Systems) and 100ng/ml cholera toxin (List Biological Labs). For aspirin studies, acini were allowed to grow for 4 days followed by treatment with aspirin every 2 days. Cells were then fixed and stained with Ki67 and laminin V on day 12 as previously described (16 (link)). Phase contrast images were acquired using the Nikon Eclipse Ti microscope. Fluorescent images were acquired using Zeiss LSM 510 Meta confocal microscope.
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8

Breast Cancer Cell Line Maintenance

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MCF10A and MDA-MB-231cells were obtained from the American Type Culture Collection (ATCC) and authenticated using short tandem repeat (STR) profiling. Primary human mammary epithelial cells (HMECs) were obtained as described (42 (link)). MCF10A cells and HMECs were maintained in DMEM/Ham’s F12 (CellGro) supplemented with 5% equine serum (CellGro), 10 mg/mL insulin (Life Technologies), 500 ng/mL hydrocortisone (Sigma-Aldrich), 20 ng/mL EGF (R&D Systems), and 100 ng/mL cholera toxin (Sigma-Aldrich). MDA-MB-231 cells were maintained in DMEM (CellGro) supplemented with 10% fetal bovine serum (FBS) (Gemini). Cells were passaged for no more than 2 months and routinely assayed for mycoplasma contamination (MycoAlert, Lonza).
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9

Culturing and Characterizing Breast Cancer Cells

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MCF10A, MDA-MB-231, T47D, and ZR-75-1 cells were obtained from the American Type Culture Collection (ATCC) and authenticated using short tandem repeat (STR) profiling. No cell lines used in this study were found in the database of commonly misidentified cell lines that is maintained by ICLAC and NCBI Biosample. MCF10A cells were maintained in DMEM/Ham’s F12 (CellGro) supplemented with 5% equine serum (CellGro), 10 mg/mL insulin (Life Technologies), 500 ng/mL hydrocortisone (Sigma-Aldrich), 20 ng/mL EGF (R&D Systems), and 100 ng/mL cholera toxin (Sigma-Aldrich). MDA-MB-231 cells were maintained in DMEM (CellGro) supplemented with 10% fetal bovine serum (FBS) (Gemini). T47D cells were maintained in RPMI 1640 (CellGro) supplemented with 10% FBS (Gemini) and 10 mg/mL insulin (Life Technologies). ZR-75-1 cells were maintained in RPMI 1640 (CellGro) supplemented with 10% FBS (Gemini). DMEM lacking glucose, glutamine, and pyruvate was obtained from CellGro. Cells were passaged for no more than 6 months and routinely assayed for mycoplasma contamination.
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10

Maintenance of Induced Pluripotent Stem Cells

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niPSCs were grown on feeders (γMEF, Life Technologies, cat #A34181) in DMEM/Ham’s F-12 (Corning) supplemented with 20% KO-SR, 1x non-essential amino acids, 1x Penicillin-Streptomycin, 1x glutamine, 1x β-Mercaptoethanol (all Life Technologies) and 10 ng/ml FGF2 (R&D Systems). Cells were fed daily and split 1:6 when they reached 80% confluency using EDTA. Established iPSCs were maintained in feeder-free condition using Matrigel (Corning) coated plates and mTeSR1 or mTeSR Plus medium (Stem Cell Technologies). All cells were kept in an incubator at 37 °C, 5% CO2, 20% O2.
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