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Shscr

Manufactured by GenePharma
Sourced in China

The ShSCR is a specialized lab equipment designed for gene silencing experiments. It utilizes short hairpin RNA (shRNA) technology to effectively knock down target gene expression. The core function of the ShSCR is to facilitate the delivery and expression of shRNA constructs in cell lines or tissue samples, allowing researchers to study the effects of gene silencing.

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6 protocols using shscr

1

Lentiviral Knockdown and Overexpression

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Recombinant lentiviruses expressing shSET7/9, shTRIM21, shSCR, FLAG-SET7/9, FLAG-TRIM21, FLAG-RUNX2, or FLAG-Vector were obtained from Shanghai GenePharma and used according to the manufacturer’s instructions. The concentrated lentiviruses were used to infect cells with 8 μg/ml polybrene in a 60-mm dish (5 × 105 cells per well). The cells were selected with 2 μg/ml puromycin (Merck) and subjected to sorting.
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2

METTL3 Knockdown and Overexpression Protocol

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Small interfering RNA targeting METTL3 (si-METTL3), and negative control (NC) were purchased from RiboBo (Guangzhou, China). The METTL3 interfering sequence was 5′-GCTGCACTTCAGACGAATT-3′. Human METTL3, MYC over-expression plasmids (OE-METTL3, OE-MYC), and negative control vector (Ctrl) were purchased from GenePharma (Shanghai, China). The plasmid vectors expressing shRNA that targets human METTL3 (sh-METTL3) and the scrambled shRNA (sh-Scr) were purchased from GenePharma (Shanghai, China). The shRNA sequences were as follows: sh-METTL3: 5′-GCACTTGGATCTACGGAATCC-3′, sh-Scr: 5′-GCTTCGCGCCGTAGTCTTA-3′. Plasmids for expression of wild-type METTL3 (METTL3-WT) and methyltransferase catalytic mutant METTL3 (METTL3-Mut) were kindly provided by Dr. Jun-Ju He (Central South University, China). Transfections were performed using Lipofectamine 2000 (Invitrogen, USA) for small interfering RNA and Lipofectamine 3000 (Invitrogen, USA) for plasmid according to the manufacturer's protocols.
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3

Transfection of TTN-AS1 knockdown

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Transfection was performed using cells in the logarithmic growth phase. The cells are seeded into six-well plates at a density of 5 × 105 cells/well. After the cells grow to 60% of the area of each well, transfection is performed. The specific procedure was carried out with Lipofectamine 3,000 according to the manufacturer’s instructions (Invitrogen, Thermo Scientific, MA, United States). The shRNA targeting TTN-AS1 (shTTN-AS1) and the shRNA targeting scramble (shSCR) were obtained from Shanghai GenePharma Co., Ltd (Shanghai, China).
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4

PTEN Amplification and miRNA Regulation

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PCR production of PTEN ampliation was cloned into pmirGLO vector (Promega). MiR-20a mimic, inhibitor and miR-NC were synthesized by GenePharma Co.Ltd. (Suzhou, China). LncRNA PTENP1 pcDNA3.1 vector (PTENP1, Invitrogen, CA, USA), LV-NC, LV-PTENP1, siPTENP1, shPTENP1, siAkt, siSCR and shSCR were obtained from GenePharma Co.Ltd. (Suzhou, China). The transfection assay was conducted with Lipofectamine 2000 (Invitrogen, Carlsbad, CA, USA) for incubation. The transfected efficiency was measured by qRT-PCR.
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5

Cloning and Evaluation of Linc01296

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PCR production of GALNT3 ampliation was cloned into pmirGLO vector (Promega). MiR-26a mimic, inhibitor and miR-NC were synthesized by GenePharma Co.Ltd. (Suzhou, China). Linc01296 pcDNA3.1 vector (linc01296), LV-NC, LV-linc01296, silinc01296, shlinc01296, siSCR and shSCR were obtained from GenePharma Co.Ltd. (Suzhou, China). The transfection assay was conducted with Lipofectamine 3000 (Invitrogen, Carlsbad, CA, USA). The transfected efficiency was measured by qRT-PCR.
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6

Lentiviral Transduction for Gene Silencing

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Recombinant lentiviruses expressing control shRNA (shSCR), shCARM1, shHIF1A, and shCDK4 were constructed by Shanghai GenePharma. The shRNA sequences used are listed in Table S1. The lentiviruses expressing empty vector and GFP-tagged CARM1 were constructed by Shanghai GenePharma Co., Ltd. (Shanghai, China). Concentrated viruses were used to infect 5 × 10 5 cells in a 60 mm dish with 8 μg/mL polybrene. Stably expressing MDA-MB-231 or Hs 578T cells were screened with 2 μg/ mL puromycin for 48 h. The infected cells were then subjected to sorting target expression.
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