The largest database of trusted experimental protocols

6 protocols using tgfβr1

1

Generation and Characterization of Genetically Engineered Mouse Models

Check if the same lab product or an alternative is used in the 5 most similar protocols
The generation of p18−/−, p18+/−, and p18−/−:Brca1+/− mice in Balb/c background, and p18−/−and p18−/−;Brca1f/f; MMTV-Cre (p18−/−; Brca1MGKO) mice in Balb/c-B6 mixed background has been previously described [18 (link), 19 (link), 54 (link)]. The Institutional Animal Care and Use Committee at the University of Miami and Shenzhen University approved all animal procedures. Animals were housed in a specific pathogen-free environment with a 12/12 light cycle. Animals were euthanized by exposure to isoflurane followed by cervical dislocation. At least four female mice were analyzed for each genotype, or were transplanted with each type of tumor cells. Histopathology and immunohistochemistry (IHC) were performed as previously described [18 (link), 19 (link), 54 (link)]. The primary antibodies used were: TGFβR1, TGFβR2 (Santa Cruz), p-Smad2, p-FRA1 (Cell signaling), CK5 (Covance), and Vim (Abcam). Immunocomplexes were detected using the Vectastain ABC DAB kit according to the manufacturer’s instructions (Vector Laboratories). The positive results of IHC were quantified by H-score, as previously described [55 (link)].
+ Open protocol
+ Expand
2

Protein Extraction and Western Blot Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
The proteins suspension of liver tissues were obtained using a total protein extraction kit (APPLYGEN, Beijing, China) and protein concentrations were determined by the BCA protein assay kit while using BSA as a standard. Subsequently, standard western blot procedures were followed, as described elsewhere [41 (link)]. β-actin was used as an endogenous control and blots were quantified by using Image J Software (NIH, Bethesda, MD, USA). The primary and secondary antibodies used for western blot (AMPK, AMPK-p, p-ACC, ACC, CD68, and β-actin) were purchased from Abcam (Cambridge, UK) and other antibodies (CaMKKβ, NF-κβ, TGF-βR1, PPARα, SMAD2/3-P, and SMAD2/3) were obtained from Santa Cruz Biotechnology (Santa Cruz, CA, USA).
+ Open protocol
+ Expand
3

Western Blot Analysis of Signaling Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were lysed in RIPA buffer (Millipore Sigma, St. Louis, MI, USA, R0278) in the presence of protease inhibitors (Roche, 11836170001). Protein lysates were quantified using BCA protein assay (Thermo Scientific, 23225), denatured in 2 × Laemmli sample buffer (Biorad, Hercules, CA, USA, 161-0737) at 95 °C for 10 min, and placed on ice for 2 min. Proteins were separated by 10% SDS-polyacrylamide gel electrophoresis (PAGE) and transferred to PVDF membranes (Millipore, IPVH00010). Membranes were blocked in 5% skim milk in TBS buffer with 0.05% tween-20 (TBS-T), incubated with primary antibody against PD-L1 (Cell Signaling, #13684), p65 (Cell Signaling, #8242), phospho-p65 (Cell Signaling, #3033), phospho-STAT1(Cell Signaling, #9167), STAT1(Cell Signaling, #14994), phospho-STAT3(Cell Signaling, #9145), STAT3(Cell Signaling, #12640), Smad2/3 (Cell Signaling, #3102), phospho-Smad2/3(Cell Signaling, #8828), TGFβR1 (Santa Cruz, sc-518018), or GAPDH (Santa Cruz, Dallas, TX, USA, sc-32233) at 4 °C overnight, washed in TBS-T buffer, and incubated with HRP-conjugated secondary antibody (G.E. Healthcare, Chicago, IL, USA, NA9340) at room temperature for 1 h. Protein bands were visualized using enhanced chemiluminescence (ECL) reaction. The density of protein bands was quantified using Image J software. The density of actin bands was used to normalize the data for protein loading.
+ Open protocol
+ Expand
4

Protein Expression Analysis in Liver Tissue

Check if the same lab product or an alternative is used in the 5 most similar protocols
The liver tissue was lysed in 0.5 mL of CelLytic M lysis reagent (Sigma-Aldrich, St. Louis, MO, USA) with 1% phosphatase inhibitor cocktail and protease inhibitor cocktail and centrifuged at 13,000× g for 30 min at 4 °C. The concentration of protein lysate was determined using the Bradford assay. In addition, the nuclear fraction was harvested using a nuclear extraction kit (Abcam, Cambridge, MA, USA) in accordance with the manufacturer’s instructions. The cell lysates were separated using sodium dodecyl sulfate (SDS)-polyacrylamide gel electrophoresis and transferred onto polyvinylidene fluoride (PVDF) membranes, following incubation with primary antibodies against NF-κB, α-SMA, TGFβ-R1, and TGFβ-R2 (all from Santa Cruz Biotechnology, Dallas, TX, USA). Finally, horseradish peroxidase-conjugated secondary antibodies were added, and the reaction was detected by electrochemiluminescence. The data were calibrated using H1 and β-actin as internal controls.
+ Open protocol
+ Expand
5

Regulation of Endometrial Cancer Markers

Check if the same lab product or an alternative is used in the 5 most similar protocols
Endometrial cancer cells AN3CA, Nestin knockdown AN3CA, KLE, Nestin knockdown KLE, Ishikawa, and Nestin overexpressing Ishikawa cells extracts were analyzed using antibodies against Nestin, cyclin D1, cyclin D3, p27, p21 (Cell Signaling Technology), TGFβ1, TGFβ2, TGFβ3, TGFβR1, TGFβR2, TGFβR3, pSMAD2/3, SMAD2/3, SMAD4 (Santa Cruz Biotechnology), pFAK (phospho Y397), E-cadherin, N-cadherin, SNAIL, SLUG, Twist, vimentin (Cell Signaling Technology, Inc.), progesterone receptor (PgR 1294; Dako Corporation), and β-actin (Sigma-Aldrich). Equal amounts of protein were subjected to SDS-PAGE. The enhanced chemiluminescence system was used to visualize the protein bands as recommended by the manufacturer (Pierce). Protein bands were quantified using densitometry software (Bio-Rad) and normalized by using actin as a loading control. To calculate the relative intensity of each band individual bands were divided by the corresponding loading control intensity.
+ Open protocol
+ Expand
6

Immunohistochemistry and Western Blot Protocols

Check if the same lab product or an alternative is used in the 5 most similar protocols
Antibodies used for immunohistochemistry were shown as follows, TGFβR1 (1:100, rabbit, sc-398, Santa Cruz Biotechnology, Dallas, TX, USA), TGFβR2 (1:25, mouse, sc-17799, Santa Cruz Biotechnology, Dallas, TX, USA) and pSMAD2/3 (1:50, goat, sc-11769, Santa Cruz Biotechnology, Dallas, TX, USA) followed by AlexaFluor 488 donkey-anti-rabbit (1:200, A21206, Invitrogen, Waltham, MA, USA), AlexaFluor 647 donkey-anti-mouse (1:200, A31571, Invitrogen, Waltham, MA, USA) or AlexaFluor 488 donkey-anti-goat (1:200, A11055, Invitrogen, Waltham, MA, USA), respectively; pre-conjugated anti-actin α-smooth-muscle-actin–Cy3 (α-SMA, C6198, Sigma, St. Louis, MO, USA). Antibodies for Western blot analysis were shown as follows: rabbit anti-vinculin (1:500, sc-5573, Santa Cruz Biotechnology, Dallas, TX, USA); rabbit anti-phospho-SMAD 2/3 (1:1000, #8828, Cell Signaling, Danvers, MA, USA); rabbit anti-SMAD2/3 (1:1000, sc-398, Cell Signaling, Danvers, MA, USA); rabbit anti-TGFβR1 (1:500, sc398, Santa Cruz Biotechnology, Dallas, TX, USA); mouse anti-TGFβR2 (1:500, sc-17799, Santa Cruz Biotechnology, Dallas, TX, USA); anti-mouse IgG HRP-conjugated antibodies (1:4000, P0447, Dako, Jena, Germany); and anti-rabbit IgG HRP-conjugated antibodies (1:4000, P0448, Dako, Jena, Germany).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!