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2 protocols using rabbit anti vacht

1

Isolation and Characterization of Spinal Cord Synaptosomes

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Synaptosomes were isolated from ventral and dorsal horn of fresh spinal cords using the Syn-PER Reagent (Thermo Scientifics). Synaptosomes were kept at 0-4 °C throughout the procedure and used for all assays. Antibodies used for characterization of synaptosomes were mouse anti-Lamin A/C, 1:1500 (Santa Cruz), rabbit anti-Synaptophysin, 1:5000 (Dako), rabbit anti-VAChT, 1:2000 (Sigma), goat anti-Na + /K + ATPase-α3 (sc-16052), 1:500 (Santa Cruz), mouse anti-GFAP, 1:1000 (Santa Cruz) and rabbit anti-SOD1, 1:2000 (Sigma), rabbit anti-VAChT, 1:2000 (Sigma), goat anti-Na + /K + ATPase-α3 (sc-16052), 1:500 (Santa Cruz). Synaptosomes were incubated with 1 % Triton X-100 for 20 min on ice and centrifuged at 14,000g for 15 min to obtain the supernatant. 60 µl of paramagnetic beads coated with G protein (Dynabeads; Invitrogen) were added to 200 μg of sample, and the mixture was precleared at 4 °C for 2 h. The mixture was centrifuged at 15,300g for 30 s and the supernatant was mixed with appropriate antibody and incubated at 4 °C overnight. 60 μl of anti-mouse or anti-rabbit IgG beads was added and incubated for 2 h, centrifuged at 15,300g for 30 s. The beads were recovered by centrifugation, washed thrice in PBS-1 % Triton X-100 buffer, resuspended in 2× Laemmli buffer, separated on 12 % SDS-PAGE gels and analyzed by IB.
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2

Immunostaining Protocol for iMNs

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iMNs were fixed in 4% paraformaldehyde (PFA) for 1h at 4 ºC, permeabilized with 0.5% PBS-T overnight at 4 ºC, blocked with 10% FBS in 0.1% PBS-T at room temperature for 2 h, and incubated with primary antibodies at 4 ºC overnight. Cells were then washed with 0.1% PBS-T and incubated with Alexa Fluor® secondary antibodies (Life Technologies) in blocking buffer for 2 h at room temperature. To visualize nuclei, cells were stained with DAPI (Life Technologies) then mounted on slides with Vectashield® (Vector Labs). Images were acquired on an LSM 780 confocal microcope (Zeiss). The following primary antibodies were used: mouse anti-HB9 (Developmental Studies Hybridoma Bank); mouse anti-TUJ1 (EMD Millipore); rabbit anti-VACHT (Sigma); rabbit anti-C9ORF72 (Sigma-Aldrich); mouse anti-EEA1 (BD Biosciences); mouse anti-RAB5 (BD Biosciences); mouse anti-RAB7 (GeneTex); mouse anti-LAMP1 (Abcam); mouse anti-LAMP3 (DSHB, cat. no. H5C6); rabbit anti-LAMP3 (Proteintech, cat. no. 12632); mouse anti-LAMP2 (DSHB, cat. no. H4B4); mouse anti-M6PR (Abcam, cat. no. Ab2733); rabbit anti-GluR1 (EMD Millipore, cat. no. pc246); mouse anti-GluR1 (Santa Cruz); rabbit anti-NR1 (EMD Millipore); mouse anti-NR1 (EMD Millipore, cat. no. MAB363); chicken anti-GFP (GeneTex).
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