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477 protocols using c57bl 6j mice

1

Mast Cell Depletion in Mice

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We used WT C57BL/6J mice28 and heterozygous Mcpt5Cre mice,23 which express Cre recombinase under control of the Mcpt5 promoter, that were crossed with Dicerfl/fl C57BL/6J mice.29 As we and others have previously shown, Mcpt5Cre/Dicerfl/fl mice are characterized by selective constitutive ablation of connective tissue‐type MCs in various tissues including the back skin.25, 27C57BL/6J mice were purchased from Janvier Labs (Le Genest‐Saint‐Isle, France). A total of 100 mice (43 females, 57 male) were used, all of which were aged between 6 and 13 weeks when used for experiments.
Mice were housed and bred at 22°C and 55% humidity, with a light‐dark cycle of 12 h, in specific pathogen‐free conditions and with ad libitum supply of food and water at the animal facility of the University of Luebeck, Luebeck, Germany. The experiments were performed in accordance with institutional and state guidelines on animal welfare, approved by the respective governmental administration and carried out by certified personnel.
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2

Mouse Models for Spinal Cord Injury Research

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In vitro experiments were done using female 8–12-week old wild type (WT) BALB/c (Envigo) or C57BL/6J mice (Janvier Labs). CX3CR1+/GFP mice were kindly provided by prof. Brône (Uhasselt). In vivo experiments were performed with either female 10–14-week old WT C57BL/6J mice (Janvier Labs) or IL-4Rα control and knockout (KO) BALB/cJ mice (#000651, #003514, The Jackson Laboratory) [17 (link)]. As male mice have a substantially higher dropout rate after SCI due to wounding and higher risk of bladder or other infections, only female mice were used in this study. Mice were housed at the conventional animal facility of Hasselt University under stable conditions (temperature-controlled room, 12 h light/dark cycle, food, and water ad libitum). Experiments and sample size calculations were approved by the local ethical committee and were performed according to the guidelines of Directive 2010/63/EU on the protection of animals used for scientific purposes.
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Aging and Hoxa9 Deficiency Murine Models

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We purchased female young adult C57/BL6j mice (3–4 months) and aged C57/BL6j mice (22–28 months) from Janvier (Wildtype mice). Female and male Hoxa9−/− mice have been described28 (link) and were obtained together with age- and gender-matched littermate controls from Kay L. Medina (Mayo Clinic, Rochester, USA). Mice were housed in a pathogen-free environment and fed with a standard diet ad libitum. Animal experiments are approved by the Landesamt für Verbraucherschutz Abteilung Gesundheitlicher und technischer Verbraucherschutz (Germany) under Reg.-Nr. 03-006/13, 03-012/13 and 03-007/15.
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4

Aging and Hoxa9 Deficiency Murine Models

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We purchased female young adult C57/BL6j mice (3–4 months) and aged C57/BL6j mice (22–28 months) from Janvier (Wildtype mice). Female and male Hoxa9−/− mice have been described28 (link) and were obtained together with age- and gender-matched littermate controls from Kay L. Medina (Mayo Clinic, Rochester, USA). Mice were housed in a pathogen-free environment and fed with a standard diet ad libitum. Animal experiments are approved by the Landesamt für Verbraucherschutz Abteilung Gesundheitlicher und technischer Verbraucherschutz (Germany) under Reg.-Nr. 03-006/13, 03-012/13 and 03-007/15.
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5

Age-dependent murine C57BL/6J study

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Young (2–3 months) male and female C57BL/6J mice were purchased from Janvier (Le Genest-Saint-Isle, France). Furthermore, middle-aged (16 months) and old (23–24 months) male and female C57BL/6J mice (initially obtained from Janvier) were obtained from our in-house breeding colonies (SFB 1506 “Aging at interfaces”; project Z02) at the Tierforschungszentrum of Ulm University. Mice were routinely housed in our animal facility under standardized pathogen-free (SPF) conditions. Aging mice were routinely checked for overall appearance, and only healthy aged mice were used in the described experiments.
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Awake Electrophysiology in C57BL/6J Mice

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All experimental procedures were carried out in accordance to Basel University animal care and use guidelines, and were approved by the Veterinary office of the Canton Basel-Stadt, Switzerland. 35 C57BL/6J mice were used in this study, procured from Janvier LABS, France. Mice were a mixture of males and females and aged between 7 and 12 weeks of age at the time of behavioural training or electrophysiological recording.
Awake electrophysiology recordings and behaviour experiments were performed on adult (7-12 weeks) male and female C57BL/6J mice (Janvier, France). For surgeries mice were anesthetized with isoflurane (4% for induction, 1.5 to 2.5% for maintenance) and subcutaneous injection of bupivacain/lidocain (0.01 mg/animal and 0.04 mg/animal, respectively) was used for analgesia. A custom-made metal headpost was fixed with super glue (Henkel, Loctite) on the bone on top of the left hemisphere, and used to headfix the animals. Their body temperature was kept at 37°C with a heating pad (FHC, ME, USA) and lubricant ophthalmic ointment was applied on both eyes. Craniotomy (~2×2 mm 2 ) was performed with a scalpel just above the right auditory cortex and covered with silicone oil and silicone casting compound (Kwik cast, World Precision Instruments, Inc. FL, USA) during the 2 h recovery period from the anesthesia.
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7

Behavioral and Electrophysiological Assessments in C57BL/6J Mice

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Behavior and biochemistry: Male C57BL/6J mice (postnatal day, PD, 56) were purchased from Janvier (Barcelona, Spain) and maintained in the animal facility (UBIOMEX, PRBB) in a 12 h light–dark cycle. Mice were housed at a stable temperature (22 °C ± 2) and humidity (55% ± 10%), with food and water ad libitum. They were allowed to acclimatize to the new environmental conditions for at least five days prior to experimentation. Animal care and experimental protocols were approved by the Barcelona Biomedical Research Park – Universitat Pompeu Fabra Ethical Committee for Animal Research (CEEA-PRBB-UPF).
Electrophysiology: Male C57BL/6J mice (PD60) were purchased from Janvier (Le Genest-Saint-Isle, France) and maintained in the animal facility in a 12 h light–dark cycle. Mice were housed at stable temperature (20 ± 1 °C) and humidity (60%), with food and water ad libitum. They were allowed to acclimatize to the new environmental conditions for at least one week prior to experimentation. All experiments were performed on male C57BL/6J mice between PD70 and PD110. The French Ethical committee authorized this project (APAFIS#3279-2015121715284829 v5).
In all the studies, animals were treated in compliance with the European Communities Council Directive (86/609/EEC) and the ARRIVE guidelines for the care and use of laboratory animals.
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Murine Cell Lineage Tracing

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Female Balb/c mice were obtained from Janvier Laboratories (Le Genest Saint Isle, France) and maintained under acidified water upon arrival. Donor cells were from specific pathogen free (SPF) C57BL/6J mice (from Janvier laboratories), congenic CD45.1+ C57BL/6J, Actin-GFP knock-in (KI) C57BL/6J, IFN-γ deficient C57BL/6J mice, all raised in our accredited animal facility at Institut Necker Enfants Malades under pathogen-free conditions. All mice were backcrossed for at least ten generations.
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9

Muscle Transduction and Aging in Mice

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24 months old male C57BL/6J mice (Janvier) were bilaterally injected in the gastrocnemius muscles with 5*1011 viral particles containing the gPum2 #1 (left leg) or the p×601 vector as control (right leg) (n = 7). Mice were housed single-caged. After 5 weeks, animals were randomized, sacrificed and processed to perform electron microscopy imaging (n = 2 per condition) and for all biochemical and functional analyses described below (n = 5 per condition). For the latter analyses, gastrocnemius muscles were rapidly removed and snap-frozen in liquid nitrogen. 2 months and 24 months old male C57BL/6J mice (Janvier) (n = 3) were sacrificed and whole brain and tibilialis anterioris tissues were OCT-embedded for immunohistochemical analysis, while quadriceps and forelimb muscles were rapidly snap-frozen. No blinding was used during the experiment procedures. All experiments were performed in compliance with all relevant ethical regulations. The mice experiments were authorized by the local animal experimentation committee of the Canton de Vaud, under license 2890. The committee that approved the license is the Commission cantonale pour l’expérimentation animale.
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10

OT-1 Transgenic Mouse Husbandry

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Animal work was carried out under UK Home Office guidelines and the approval of the Regional Animal Ethics Committee of Northern Stockholm, Sweden. Mice were housed in a specific pathogen-free animal facility, provided with food and water ad libitum, and maintained on a 12-hour light-dark cycle at 21°C. Genotyping was performed with DNA from ear biopsies using commercial Transnetyx qPCR assays. C57Bl/6J mice were purchased from Janvier Labs. Donor TCR transgenic OT-1 mice (JAX 003831, The Jackson Laboratory) were crossed with mice bearing the CD45.1 congenic marker (JAX 002014, The Jackson Laboratory). All mice were backcrossed over ten generations to the C57BL/6J background. Male and female animals >6 weeks of age were used in experiments. Groups were assigned randomly for mouse experiments and the investigator was blinded to group assignment. No statistical methods were used to pre-determine sample size.
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