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Anti phospho perk

Manufactured by Santa Cruz Biotechnology
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Anti-phospho-PERK is a laboratory reagent used to detect the phosphorylated form of the protein kinase R (PKR)-like endoplasmic reticulum kinase (PERK). PERK is a key sensor of the unfolded protein response (UPR) pathway, which is activated in response to endoplasmic reticulum (ER) stress. The phosphorylation of PERK is a critical step in the UPR signaling cascade.

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11 protocols using anti phospho perk

1

Ceramide Regulation of Cellular Stress

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Agents were purchased/obtained as follows: (1) bortezomib (Biovision, Palo Alto, CA); (2) fumonisin B1, palmitate, 4-PBA (4-phenylbutyric acid), TUDCA (tauroursodeoxycholic acid), and anti-α-tubulin, anti-HA and anti-CerS2 antibodies (Sigma-Aldrich, St Louis, MO); (3) ceramides (fatty acyl lengths C16, C18, C20, C22, and C24) and C17 ceramide (d17:1/C18:0) (Avanti Polar Lipid, Alabaster, AL); (4) anti-GRP78, anti-CHOP, anti-FAS, anti-phospho-eiF2α, anti-eiF2α, anti-PERK, and anti-SCD-1 antibodies (Cell Signaling Technology, Beverly, MA); (5) anti-SREBP-1, anti-phospho-PERK and anti-CerS6 antibodies (Santa Cruz Biotechnology, Santa Cruz, CA); (6) anti-GAPDH (glyceraldehyde 3-phosphate dehydrogenase) antibody (Millipore, Temecula, CA); (7) anti-INSIG-1 antibody (Abcam, Cambridge, MA); (8) anti-mouse-HRP (horseradish peroxidase) and anti-rabbit-HRP antibodies (Jackson Laboratory, Bar Harbor, ME).
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2

Diabetic Oxidative Stress Modulation

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UDCA was kindly provided by Daewoong Pharmaceutical Co. Ltd. (Seoul, Korea). D-glucose, mannitol, streptozotocin (STZ), pyrrolidine dithiocarbamate (PDTC), and an NF-κB inhibitor were purchased from Sigma-Aldrich (St Louis, MO). SP600125, a selective JNK inhibitor, was from Promega (Madison, WI). Antibodies against phospho-IκB, NF-κB p65, phospho-ERK1/2, ERK1/2, phospho-JNK, and JNK were from Cell Signaling Technology (Beverly, MA). Antibodies against RAGE, S100A12, and XBP1 were from Abcam (Cambridge, MA). Anti-phospho-PERK, anti-CHOP, anti-Nrf2, anti-phospho-p38, anti-p38, anti-β-actin, anti-CD68, anti-CD11b/c, anti-GRP78, anti-mouse IgG-R, and anti-rabbit IgG-R antibodies were from Santa Cruz Biotechnology (Santa Cruz, CA). Anti-ATF6 antibody was from IMGENEX (San Diego, CA). Anti-VCAM-1 antibody was from Novus Biologicals. Anti-ICAM-1 antibody was from SouthernBiotech (Birmingham, AL). Anti-rat IgG-R antibody was from Jackson ImmunoResearch (West Grove, PA).
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3

Insulin Signaling Pathway Analysis

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The animals were intraperitoneally injected with insulin (1 U/kg) or saline, and, after 5 min, liver, gastrocnemius muscle, and epididymal adipose tissue were extracted and homogenized in buffer as described in Saad et al. [35] (link). Samples of all tissue extracts were subjected to electrophoresis and western blotting [35] (link), [36] (link), [37] (link). Bands were detected using the chemiluminescence method (West Pico Chemiluminescent Substrate Kit, Thermo Scientific, USA). The antibodies used were anti-phospho-JNK, anti-phospho-IKKα/β, anti-phospho-PERK, anti-phospho-IRE1α, and anti-ATF6α (all obtained from Santa Cruz Technology, Santa Cruz CA, USA) and anti-phospho-Akt and anti-phospho-IRS-1 (Cell Signaling, Boston, MA, USA).
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4

Atrial Myocardium Protein Extraction

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Proteins were isolated from atrial myocardium samples of patients and mice by M‐PER Mammalian Protein Extraction Reagent (Thermo Fisher Scientific Inc) that contained protease inhibitors and phosphatase inhibitors. Primary anti‐GRP78 (sc‐376768, Santa Cruz), anti‐CHOP (#2895, Cell Signaling Technology), anti‐GAPDH (Bioworld, AP0063), anti‐phospho‐PERK (sc‐32577, Santa Cruz), anti‐PERK (sc‐13073, Santa Cruz), anti‐TGF‐β(Abcam, ab92486), anti‐α‐SMA(Abcam, ab32575), anti‐Collagen I (Abcam, ab34710) and anti‐Collagen III(Abcam, ab7778) were used for Western blotting experiments. Gel Imaging System (Tanon) and Image J software were used to image and analyse Western blotting bands.
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5

Protein Expression Analysis by Western Blotting

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Whole cell lysates were prepared and analyzed by Western blotting as described previously [32 (link)]. Proteins in cell lysates were separated by precast 8-20% SDS-polyacrylamide gel electrophoresis, and then electrophoretically transferred from the gel onto polyvinylidene difluoride membranes. After blocking, blots were incubated with anti-GRP78, anti-GRP94, anti-phospho-PERK, anti-caspase-12, anti-caspase-7, anti-CHOP, anti-PARP, and anti-β-actin antibodies (Santa Cruz Biotechnology) and anti-eIF2α (Cell Signaling Technology, Danvers, MA, USA) in PBS within 0.1% Tween 20 for 1 h followed by two 15 min washes in PBS with 0.1% Tween 20. The membranes were then incubated with horseradish peroxidase-conjugated secondary antibodies for 60 min. Detection was performed with Western blotting reagent ECL (Amersham-GE Healthcare Life Sciences, Pittsburgh, PA, USA), and chemiluminescence was exposed by the Kodak X-Omat films.
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6

Dissecting Apoptosis and ER Stress Pathways

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Anti-HDAC6 (sc11420, Santa Cruz), anti- acetyl-histone H3 (9649, Cell Signaling Technology), anti-BAX (ab32503, Abcam), anti-Bcl-2 (ab3214, Abcam), anti-cleaved caspase-3 (9664, Cell Signaling Technology), anti-phospho-JNK (4668, Cell Signaling Technology), anti-JNK (ab208035, Abcam), anti-phospho-eIF2α (3398, Cell Signaling Technology), anti-eIF2α (5324, Cell Signaling Technology),anti-phospho-PERK (sc32577, Santa Cruz) anti- GRP78 (ab108613, Abcam), anti- IRE1α (ab48187, Abcam), anti-CHOP (2895, Cell Signaling Technology), anti-ATF4 (11815, Cell Signaling Technology), anti- XBP1 (ab37152, Abcam), anti-caspase-12 (ab62484, Abcam).
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7

Western Blot Analysis of ER Stress Markers

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The heart samples in the sham and TAC group with or without 4-PBA were excised and homogenized. The following antibodies were used for western blotting: anti-GRP78 (sc-376768, Santa Cruz), anti-CHOP (#2895, Cell Signaling Technology), anti-β-actin (sc-47778, Santa Cruz), anti-phospho-PERK (sc-32577, Santa Cruz), anti-PERK (sc-13073, Santa Cruz), anti-Acetyl-Histone 3 (#9649, Cell Signaling Technology) and anti-Histone 3 (#4499, Cell Signaling Technology). Samples containing equal amounts of protein were separated by SDS-PAGE and transferred onto PVDF membranes. The membranes were blocked with 5% skim milk at room temperature for 2 h and then incubated overnight at 4°C with the primary antibody. After being incubated with anti-mouse secondary antibody (#7076S, Cell Signaling Technology) or anti-rabbit secondary antibody (#7074S, Cell Signaling Technology) for 1 h at room temperature, the blots were detected in the dark room using autoradiography film (Denville Scientific, Inc) and quantified by densitometry using the Image J Analysis software (National Institutes of Health).
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8

Investigating ER Stress Signaling Mechanisms

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HaCaT cell lysates were prepared, and total protein was extracted and separated by SDS-PAGE. The separated proteins were transferred to a nitrocellulose membrane and the membrane was incubated with the following primary antibodies: Anti-CHOP, anti-IRE1, anti-caspase-12, anti-poly (ADP-ribose) polymerase (PARP), anti-Mcl-1, anti-caspase-3, anti-caspase-9 (Cell Signaling Technology, Danvers, MA, USA), anti-phospho-IRE1 (Abcam, Cambridge, MA, USA), anti-phospho-PERK, anti-PERK, anti-phospho-eIF2, anti-glucose-regulated protein, 78 kDa (GRP78), anti-XBP-1, anti-ATF6, anti-Bcl-2, anti-Bax (Santa Cruz Biotechnology), and anti-actin (Sigma Aldrich). Subsequently, goat anti-rabbit or mouse IgG secondary antibodies conjugated with horseradish peroxidase (Invitrogen) were added and incubated. Protein expression was detected using Amersham enhanced chemiluminescence western blotting detection reagent (GE Healthcare, Buckinghamshire, UK).
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9

Evaluating ER Stress Markers in Cells

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Antibodies to detect human pancreatic ER kinase (PERK), eukaryotic translation initiation factor 2a (eIF2a), activating transcription factor (ATF)-3, ATF-4, C/EBP homologous protein (CHOP), cation transport regulator homolog 1 (CHAC1), and caspase 12 were purchased from Cusabio (Hubei, China). Anti-phospho-PERK, p-eIF2a, glutathione peroxidase 8 (GPX8), and glyceraldehyde 3-phosphate dehydrogenase (GAPDH) were purchased from Santa Cruz Biotechnology, Inc. (Dallas, TX, USA). MS-275, suberanilohydroxamic acid (SAHA), tertiary-butyl-hydroperoxide (tBHP), tunicamycin, and thapsigargin were purchased from Tocris Bioscience (Bristol, UK). Cell-Counting Kit 8 (CCK8) was purchased from Dojindo Molecular Technologies (Rockvill, MD, USA). The apoptosis detection kit was purchased from BD Biosciences (Franklin Lakes, NJ, USA). GPX8 rescue PLAK1 was a gift from Prof. Yoav Shaul (Addgene plasmid #161517).
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10

Immunoblot Analysis of ER Stress Markers

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Immunoblot analysis was performed according to a previously described method48 (link). The following primary antibodies were used: anti-phospho-IRE, anti-IRE1 (1:1000; Cell Signaling Technology, Danvers, MA, USA), anti-phospho-PERK, anti-PERK (1:1000; Santa Cruz Biotechnology, Santa Cruz, CA, USA), anti-GRP 78 antibody (1:200; Abcam, Cambridge, MA, USA), anti-CHOP antibody (1:1000; Abcam, Cambridge, MA, USA), anti-cleaved caspase-12 (1:200; Abcam, Cambridge, MA, USA), anti-AdipoR1 antibody (1:1000; BD Bioscience, Franklin Lakes, NJ, USA), anti-AdipoR2 antibody (1:1000; BD Bioscience, Franklin Lakes, NJ, USA), anti-β-actin antibody (1:10000; Santa Cruz Biotechnology, Santa Cruz, CA, USA), and anti-β-tubulin antibody (1:10000; Santa Cruz Biotechnology, Santa Cruz, CA, USA). The membranes were then washed and incubated with suitable secondary antibodies for 1 h at room temperature. Antigens were detected using the chemiluminescence technique (Amersham Pharmacia Biotech Piscataway, NJ, USA). Image analysis was completed using the Bio-Rad Laboratories (Hercules) analysis software.
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