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Reversed phase hplc

Manufactured by Jasco
Sourced in Japan

Reversed-phase HPLC is a type of high-performance liquid chromatography (HPLC) technique used for the separation and analysis of a wide range of chemical compounds. It utilizes a non-polar stationary phase and a polar mobile phase to separate analytes based on their hydrophobicity.

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4 protocols using reversed phase hplc

1

Chemical Synthesis of 7-Deazaguanosine RNA

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The chemical synthesis of 7-deazaguanosine-containing RNA is shown in the Supporting Information. All RNAs were prepared with an automatic DNA/RNA synthesizer (Nihon Techno Service Co., Ltd.). RNA samples were purified by reversed-phase HPLC (Jasco). RNAs were labeled with [γ-32P]ATP (PerkinElmer) and T4 polynucleotide kinase (2021S, TaKaRa Bio Inc.).
We transformed and expressed pET-15b vector (Novagen) containing the RNA-binding domain of hnRNPA1 from human in the Escherichia coli strain C41(DE3).44 (link) On the basis of the manufacturer’s protocol, the protein was purified using Ni–nitrilotriacetic acid (NTA) affinity resin (Nacalai Tesque) and the bound nucleic acids were removed from E. coli by using Bensonase endonuclease digestion (Sigma-Aldrich), then repurified using Ni–NTA affinity resin, and concentrated by using a Vivaspin filter (GE Healthcare).
7OTD and its fluorescent derivative Cy5–7OTD were prepared by introducing an additional oxazole moiety in 6OTD according to the previous report.42 (link),43 (link)
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2

Enzymatic Conversion of Z-PAOx to PAN

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The activity was determined in modified protocol according to literature known methods32 (link). The assay solution contained 437.5 µL potassium phosphate buffer (50 mM, pH 7.0), 12.5 µL of Z-PAOx (200 mM solution in dimethyl sulfoxide, final concentration 5.0 mM), 50.0 µL of purified OxdB(C)6His or its variants (0.15 mg mL−1; 3.75 µM), in a total volume of 500 µL. The reaction was carried out for 1 min at 30 °C with shaking at 900 rpm. Simultaneous addition of 400 µL of acetonitrile (ACN) and 100 µL of hydrochloric acid (0.1 M) stopped the reaction. After centrifugation (21,500×g, 10 min, 4 °C), the supernatant was transferred into HPLC vials and the conversion to PAN was measured by reversed phase-HPLC (Jasco, Nova Scotia, Canada) in comparison to a calibration curve. Measurements were conducted on a Nucleodur C18 HTec column (Macherey–Nagel, Düren, Germany) at 40 °C isocratic with water/ACN (70:30 v/v) as mobile phase and UV detection at 210 nm. Assays were conducted in triplicates for each variant.
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3

Reversed Phase-HPLC Analysis of Synthetic Peptides

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Analyses of synthetic peptides were carried out by Reversed Phase-HPLC (JASCO Corp., Tokyo, Japan) on a XBridge™ BEH C18 column (100 × 4.6 mm, 3.5 µm) (Water Corp., Milford, MA, USA) with a solvent B (acetonitrile with 0.05% TFA) versus solvent A (water with 0.05% TFA) 0%–70% gradient, at a flow rate of 1 mL/min for 8 min. Chromatograms were obtained using ChromPass Chromatography Data System software (Version 1.7.403.1, JASCO Corp., Tokyo, Japan), measured at 214 nm. Additional runs with the peptides using 10%–50% (NBC 155, 759) and 20%–45% (NBC 112, 1951) gradients were performed to improve the resolution in order to collect individual peaks for MS identification.
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4

HPLC Detection of PAHs in Tattoo Inks

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Reversed‐phase HPLC (Jasco, Tokyo, Japan) was performed with an aSymmetry C18 column (100 Å, 5 μm, 3.9 × 150 mm; Waters, Milford, Massachusetts) containing dimethyloctadecylsilyl‐bonded amorphous silica to detect the presence of PAHs in the black inks. A PAH identification mixture and a benzo[a]pyrene standard were obtained from Sigma Chemical. To prepare the benzo[a]pyrene standard, the chemical was dissolved in methanol to a concentration of 10 μg/mL. Each black ink (1 mL) was extracted overnight with 5 mL of dinitrochloromethane (Biosolve, Valkenswaard, The Netherlands), and dried in a vacuum concentrator (RVC‐2‐25 Co plus; M. Christ, Osterode, Germany). Subsequently, ink samples were dissolved in methanol. Samples were filtered over a polytetrafluoroethylene 0.2‐μm membrane filter, and elution was performed with a linear gradient from 40% to 85% acetonitrile (Actu‐ALL chemicals, Oss, The Netherlands) containing 0.1% trifluoroacetic acid (Biosolve) for 45 minutes at a flow rate of 1 mL/min. The PAH identification mixture was used for comparison with peaks obtained from the tattoo inks. For identification of benzo[a]pyrene, 20 μL of 10 μg/mL benzo[a]pyrene standard was analysed separately, and 90 μL of 100 μg/mL benzo[a]pyrene standard was then spiked with 10 μL of the extracted Intenze Sculpting Black tattoo ink fraction.
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