The largest database of trusted experimental protocols

7 protocols using gata4

1

Crosslinking Protein Immunoprecipitation Workflow

Check if the same lab product or an alternative is used in the 5 most similar protocols
Total proteins were used for immunoprecipitation using Pierce™ Crosslink Magnetic IP/Co‐IP Kits (#88805, Thermo Scientific Pierce™ Crosslink Magnetic IP/Co‐IP Kit, Thermo Fisher Scientific, IL, USA) as recommended by the supplier. Primary antibodies against Bmi‐1 (#5856, Cell Signaling Technology, USA), RING1B (#5694, Cell Signaling Technology, USA), GATA4 (#19530, Proteintech, USA), p62 (#39749, Cell Signaling Technology, USA), anti‐ubiquitin (#91112, Cell Signaling Technology, USA), HSC70 (10654‐1‐AP, Proteintech, USA), DYKDDDDK Tag (Anti‐FLAG M2 antibody, #14793, Cell Signaling Technology, USA), His‐Tag (#12698, Cell Signaling Technology, USA), HA‐Tag (#3724, Cell Signaling Technology, USA) and Myc‐Tag (M1405‐5, Hangzhou HuaAn Biotechnology, China) were used.
+ Open protocol
+ Expand
2

Protein Expression Analysis by Western Blot

Check if the same lab product or an alternative is used in the 5 most similar protocols
Protein extracts (40 μg) were separated using 12% (wt./vol.) SDS-PAGE, transferred onto a polyvinylidene fluoride (PVDF) membrane, and probed with antibodies for atrial natriuretic peptide (ANP) and β-myosin heavy chain (β-MHC; Abcam), GATA4 (Proteintech, Chicago, IL, USA), p-NF-кB p65, NF-кB p65 (Cell Signaling Technology, Beverly, MA, USA) overnight at 4°C. Membranes were then washed extensively with TBS/T and incubated with a horseradish peroxidase-conjugated secondary antibody (Santa Cruz) for 1 h at room temperature. Protein was visualized using the ECL Plus detection system (GE Healthcare, WI, USA).
+ Open protocol
+ Expand
3

Comprehensive Cardiac Biomarker Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Primary antibodies were against ANP (#AB5490, Millipore, USA; sc‐515701, Santa Cruz Biotechnology Inc., USA), BNP (#DF6902, Affinity Biosciences, USA; ab19645, Abcam, USA), GATA4 (#19530, Proteintech, USA), 8‐OHdG (ab62623, Abcam, USA), γH2A.X (#9718, Cell Signaling Technology, USA), NF‐κB‐p65 (#8242, Cell Signaling Technology, USA), IL‐1β (sc‐52012, Santa Cruz Biotechnology Inc., USA), IL‐6 (sc‐1265, Santa Cruz Biotechnology Inc., USA) or TNF‐α (NBP1‐19532, Novus Biologicals, USA).
+ Open protocol
+ Expand
4

Comprehensive Protein Analysis in Cardiac Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Primary antibodies were against p19 (NB200‐106, Novus Biologicals, CO, USA), p21 (#2947, Cell Signaling Technology, Beverly, MA, USA), p53 (#2424, Cell Signaling Technology, USA), p16 (ab211542, Abcam, Cambridge, MA, USA), renin (#5250, Cell Signaling Technology, USA), Ang II (NBP1‐31127, Novus Biologicals, USA), ANP (#AB5490, Millipore, MA, USA; sc‐515701, Santa Cruz Biotechnology Inc., Dallas, TX, USA, USA), BNP (#DF6902, Affinity Biosciences, OH, USA; ab19645, Abcam, USA), GATA4 (#19530, Proteintech, IL, USA; sc‐25310, Santa Cruz Biotechnology Inc., USA), LC3B (#NB600‐1384, Novus Biologicals, USA), p62 (#39749, Cell Signaling Technology, USA), Bmi‐1 (#5856, Cell Signaling Technology, USA; 66161‐1‐Ig, Proteintech, USA), RING1B (#5694, Cell Signaling Technology), NF‐κB‐p65 (sc‐8008, Santa Cruz Biotechnology Inc., USA; #8242, Cell Signaling Technology, USA), p‐p65 (Ser536) (ab76302, Abcam, USA), IκB‐α (AF1282, Beyotime Biotechnology, Shanghai, China), p‐IκB‐α (Ser32) (sc‐8404, Santa Cruz Biotechnology Inc., USA), p‐Chk2 (Thr68) (PA5‐104715, Invitrogen Inc. CA, USA), SOD‐2 (NB100‐1992, Novus Biologicals, USA), HSC70 (10654‐1‐AP, Proteintech, USA), p‐ULK1 (Ser757) (#14202, Cell Signaling Technology, USA) and ULK1 (sc‐390904, Santa Cruz Biotechnology, USA). β‐actin (AP0060, Bioworld Technology Inc., MN, USA) was loading control for total protein.
+ Open protocol
+ Expand
5

Immunodetection of Key Cellular Markers

Check if the same lab product or an alternative is used in the 5 most similar protocols
Primary antibodies were against GATA4 (#19530, Proteintech, USA), GATA4 (sc‐25310, Santa Cruz Biotechnology Inc., USA), LC3B (#NB600‐1384, Novus Biologicals, USA), p62 (#39749, Cell Signaling Technology, USA) or LAMP2 (sc‐20004, Santa Cruz Biotechnology Inc., USA).
+ Open protocol
+ Expand
6

Pathways and Markers in Stem Cell Differentiation

Check if the same lab product or an alternative is used in the 5 most similar protocols
The Wnt pathway inhibitors MSAB and Wnt agonist 1, the TGF-β agonist SRI-011381, and the TGF-β1 inhibitor pirfenidone (PFD) were obtained from Selleck (Shanghai, China). Antibodies against collagen I, CD9, and CD63 were obtained from Beyotime (Shanghai, China). Antibodies against glyceraldehyde 3-phosphate dehydrogenase (GAPDH), collagen II, GATA4, aggrecan (Acan), tumor susceptibility gene 101 (TSG101), and TGF-β1 were purchased from Proteintech (Wuhan, China). Collagenase II was purchased from Sangon Biotech (Shanghai, China). Antibodies against a disintegrin and metalloproteinase with thrombospondin motifs 5 (ADAMTS5), sirtuin 9 (SOX9), transcription factor 4, and β-catenin were purchased from Bioss (Beijing, China). Antibodies against HIF-1α were obtained from Santa Cruz Biotechnology (Dallas, TX, United States). PKH26 was obtained from Sigma (St. Louis, MO, United States). MSC osteogenic differentiation medium, chondrogenic differentiation medium, and adipogenic differentiation medium were provided by Cyagen (Guangzhou, China).
+ Open protocol
+ Expand
7

Quantifying Cardiac Stem Cells in Myocardium

Check if the same lab product or an alternative is used in the 5 most similar protocols
Paraffin sections (~4 μm thickness) of the myocardial tissue including anatomical areas were immunostained against c-kit (Cell Signaling Technology, Danvers, MA), CD-133 (Life Technologies, Grand Island, NY), Nkx2.5 (Abcam, Boston, MA), cardiac troponin I (Abcam, Boston, MA) and GATA4 (Proteintech, Chicago, IL) and examined using Leica SP2 inverted confocal microscopy system (Leica Microsystems, Wetzlar, Germany) and LSM 710 confocal microscopy system (Carl Zeiss, Oberkochen, Germany). Images were measured by Image J (provided by NIH, http://imagej.nih.gov/ij/). The color threshold was adjusted manually and positive signal intensity was analyzed. The number of LV cardiomyocytes and CSCs per unit volume of myocardium was determined using Velocity 3D image analysis software (PerkinElmer, Waltham, MA).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!