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4 protocols using anti rabbit igg hrp antibody

1

Western Blot Analysis of Phospho-ERK1/2

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Tissue and cells were homogenized in 1× RIPA with 1% protease/phosphatase inhibitor, followed by sonication. Samples were prepared with 2× SDS Page buffer (125 mM Tris pH7, 4% SDS, 0.2% bromophenol blue, 20% glycerol, 5% β-mercaptoethanol) and boiled at 98 °C for 5 min prior to loading. Proteins were separated in 4–20% Mini-PROTEAN TGX Stain-Free Protein Gels (Bio-rad (Hercules, CA, USA), #456-8093) and transferred to Trans-Blot Turbo Mini Nitrocellulose Transfer Packs (Bio-rad, #170-4158). Membranes were blocked in 5% nonfat milk (Biorad, #170-6404) diluted in 1× Tris Buffered Saline, 0.1% Tween 20 (TBST) for 1 h and incubated in primary antibodies at 4 °C overnight with rotation. Membranes were rinsed 5 times with TBST and incubated at room temperature for 1 h in secondary antibody. The membranes were then rinsed 5 times in TBST for 10 min each and imaged on a Bio-Rad ChemiDoc MP system with SuperSignal West Femto Maximum Sensitivity Substrate (ThermoFisher (Waltham, MA, USA), #34096). Primary antibodies were used at 1:1000 and included p-p44/p42 MAPK (t202/y204) (phospho-ERK1/2) (Cell Signaling (Danvers, MA, USA); No. 4270S) and p44/42 MAPK (ERK1/2) (Cell Signaling; No. 4695S. Secondary anti-rabbit IgG HRP antibody (Sigma (Burlington, MA, USA); No: A9169) was used at 1:7500. Ponceau S (Millipore Sigma; No: P7170) was performed as need for protein normalization.
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2

Western Blot Analysis of Signaling Pathways

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Protein was harvested using 1X RIPA, prepared with 2X SDS Laemmli buffer (125mM Tris pH7, 10% glycerol, 2% SDS, 5% β-mercaptoethanol, and 0.05% bromophenol blue) and separated via Bio-Rad mini blot gel electrophoresis chamber with 4–20% Mini-PROTEAN TGX Stain-Free Protein Gels (Bio-Rad, #456–8093). Protein was transferred to Trans-Blot Turbo Mini Nitrocellulose Transfer Packs (Bio-Rad, #170–4158) with Bio-Rad Trans-Blot Turbo semi-dry transfer system and blocked with 5% dry fat milk diluted in 1X TBS- 1% Tween (TBS-T). Membranes were incubated in primary antibodies diluted in 5% block (1:1000) overnight at 4 °C and included: p-AKT (#4060S), p-ERK1/2 (#4370S), AKT (#2920S) and ERK1/2 (#4695S) (Cell Signaling). Following washes in 1X TBS-T, blots were probed with anti-rabbit IgG HRP antibody (Sigma, #A9169, 1:7500) in 5% block for 1 h at room temperature, washed with 1X TBS-T, and exposed to West Femto maximum sensitivity substrate (ThermoFisher, Waltham, MA, USA, #34096) or Pierce ECL Western blotting substrate (ThermoFisher, #32209) prior to imaging on a Bio-Rad ChemiDoc MP Imaging System. Relative Densities of bands were measured in Fiji, normalized, and compared in GraphPad Prism.
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3

Monitoring EphB4 Expression in Mouse ES Cells

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Expression of Ephb4 was monitored by Western blot analysis. To induce EphB4 expression, doxycycline of various concentrations (0, 500, and 1,000 ng/ml) was added to the mouse ES cell growth medium for 2 days, and then the cells were lysed in RIPA buffer (1% Triton X-100, 0.1% SDS, 1% sodium deoxycholate, 1 mM EDTA, 1 mM sodium orthovanadate, 1 mM sodium fluoride, 10 μM leupeptin, 150 mM NaCl, 50 mM Tris, pH 7.4) supplemented with 1% protease inhibitor cocktail (Sigma–Aldrich) [Bai et al., 2012 (link)]. Western blot analyses were performed with anti-EphB4 antibodies (BD Biosciences) as primary antibodies and anti-rabbit IgG-HRP antibodies (Sigma–Aldrich) as secondary antibodies. The protein expression levels were quantified using Photoshop software based on band area and gray scale.
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4

Monitoring EphB4 Expression in Mouse ES Cells

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Expression of Ephb4 was monitored by Western blot analysis. To induce EphB4 expression, doxycycline of various concentrations (0, 500, and 1,000 ng/ml) was added to the mouse ES cell growth medium for 2 days, and then the cells were lysed in RIPA buffer (1% Triton X‐100, 0.1% SDS, 1% sodium deoxycholate, 1 mM EDTA, 1 mM sodium orthovanadate, 1 mM sodium fluoride, 10 µM leupeptin, 150 mM NaCl, 50 mM Tris, pH 7.4) supplemented with 1% protease inhibitor cocktail (Sigma–Aldrich) [Bai et al., 2012]. Western blot analyses were performed with anti‐EphB4 antibodies (BD Biosciences) as primary antibodies and anti‐rabbit IgG‐HRP antibodies (Sigma–Aldrich) as secondary antibodies. The protein expression levels were quantified using Photoshop software based on band area and gray scale.
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