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4 protocols using d2141

1

HNSCC Stemness Assessment via Tumorspheres

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HNSCC sphere assays, designated tumorspheres, were used to assess stemness, a property thought to contribute to metastatic potential. HNSCC tumorspheres (UM-SCC-14A) were prepared as previously reported.31 (link) In other experiments, cells were treated with either glutamine (10–30 μg/mL) (49419, Sigma-Aldrich, St. Louis, MO) or 6-diazo-5-oxo-L-norleucine (DON; 1 mM) (D2141, Sigma-Aldrich, St. Louis, MO) and cultured under adherent or suspension conditions for 72 h.
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2

Cell Culture Conditions and Treatments

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HEK 293T cells, HeLa cells and mouse BNL CL2 cells were cultured in Dulbecco's modified Eagle's medium (DMEM) with high glucose (11965, Gibco) supplemented with 10% fetal bovine serum (04-001, Biological Industries) and 1% penicillin-streptomycin (15140, Gibco). Cells were kept in a 37°C incubator with 5% CO2. DON (D2141, Sigma-Aldrich) and cytidine were dissolved in water. Mycophenolic acid (M3536, Sigma-Aldrich), guanosine, 3′-deazauridine (sc-394445, Santa Cruz Biotechnology), LY294002 (9901S, Cell Signaling) and rapamycin (R0395, Sigma-Aldrich) were dissolved in DMSO (D2650, Sigma-Aldrich). Chemicals were added in culture medium as described.
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Cell Culture and Treatment Protocol

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PLC/PRF/5, SK-Hep1 were obtained from the American Type Culture Collection (Manassas, VA), MHCC-97H was from the Cell Bank of the Chinese Academy of Sciences (Shanghai, China). All cell lines were confirmed free of mycoplasma (MycoAlert PLUS kit; Lonza, Basel, Switzerland) and cell authentication was performed by short tandem repeat profiling (Beijing Microread Gene Technology Co., Beijing, China). Cells were cultured in Dulbecco’s modified Eagle’s medium (DMEM; Gibco, Grand Island, NY, USA) supplemented with 10% FBS (Corning, NY, USA), 100 mg/mL streptomycin, and 100 IU penicillin at 37 °C containing 5% CO2.
Cells were cultured in medium supplemented with 6-diazo-5-oxo-l-norleucine (DON, 20 μM; D2141; Sigma-Aldrich, St Louis, MO, USA), ST045849 (ST, 50 μM; MFCD03308174; Tim Tec, Newark, USA), Thiamet G (TG, 25 μM; S7213; Selleckchem, Houston, USA) or Cycloheximide (CHX, 100 μM; HY-12320; MedChemExpress, New Jersey, USA) and then collected for analysis.
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4

Evaluating Gemcitabine Metabolism in Pancreatic Cancer Cells

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The K8484 cell line was maintained in DMEM (D6429, Sigma Aldrich Co Ltd.) containing 5% FBS (10270-098, Life Technologies Ltd., Paisley, UK). MIA PaCa-2 cells were obtained from the European Collection of Cell Cultures (Public Health England, Salisbury, UK, authenticated by STR genotyping) and maintained in DMEM containing 10% FBS. Gemcitabine (3259, Tocris Bioscience) was dissolved in DMSO; linoleate (L8134, Sigma Aldrich Co Ltd.) and 6-diazo-5-oxo-L-norleucine (DON, D2141 Sigma Aldrich Co Ltd.) were dissolved in sterile water. Experiments assessing the effect of DON on dFdC metabolism were carried out in media lacking glutamine (D5671, Sigma Aldrich Co Ltd.). Growth-inhibition assays were carried out using the sulphorhodamine assay, and subsequent synergy calculations were done as previously described (Lin et al, 2012 (link)).
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