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2 protocols using sw620

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Colorectal Cancer Cell Line Manipulation

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Normal colon FHC cells and four CRC cell lines (SW480, HCT116, SW620, LoVo) were purchased from COBIOER (Nanjing, China) and cultured in Dulbecco’s modified eagle medium (DMEM; Invitrogen, Carlsbad, CA, USA) supplemented with 10% fetal bovine serum (FBS, Gibco, Carlsbad, CA, USA), 100 U/mL penicillin and 100 μg/mL streptomycin at 37°C under a humidified atmosphere containing 5% CO2.
Short hairpin RNA (shRNA) targeting circ_0000512 (sh-circ#1, sh-circ#2 and sh-circ#3) and corresponding negative control (sh-NC), RUNX1 overexpression vector (RUNX1) and empty vector (vector) were purchased from Genechem (Shanghai, China). MiR-296-5p mimic or inhibitor (miR-296-5p or anti-miR-296-5p) and their negative controls (miR-NC or anti-NC) were synthesized by GenePharma (Shanghai, China). HCT116 and SW620 cells were transfected with these oligonucleotides (50 nM) or vectors (2 μg) by Lipofectamine 3000 reagent (Invitrogen).
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2

Knockdown of lncRNA DLEU1 in CRC cells

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CRC cell lines (LoVo, SW620, HCT116 and SW480) and normal cells HIEC were obtained from Cobioer (Nanjing, China) and followed their instructions to culture at 37°C. Sh-LncRNA DLEU1(sequence: CAACGGAAUGUAUCAAUGATT), sh-PRPS1(sequence: GCAGCTCCCACCAGGACTTAT), sh-NC(sequence: TTCTCCGAACGTGTCACGT), miR-320b mimics(sequence: AAAAGCUGGGUUGAGAGGGCAA), NC mimics(sequence: UUCUCCGAACGUGUCACGUTT), miR-320b inhibitors(sequence: UUGCCCUCUCAACCCAGCUUUU) and NC inhibitors(sequence: CAGUACUUUUGUGUAGUACAA) were obtained from RIBOBIO (Guangzhou, China). Cell transfection was conducted following the instruction of Lipofectamine 2000 (Invitrogen, CA, USA). Stably DLEU1-knockdown cell lines were screened out as previously reported (20 (link)). In brief, oligonucleotide for small hairpin RNA (shRNA) targeting DLEU1 was synthesized and inserted into the shRNA vector pGPH1/Neo (GenePharma, Shanghai, China). The DLEU1 shRNA vector was transfected into LoVo and SW480 cells with Lipofectamine 3000 (Invitrogen, CA, USA) and selected for 4 weeks with neomycin (1000 μg/ml). Scrambled shRNA (sh-NC) was applied as control. After culturing for 48 h, cells were utilized for follow-up study.
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