The largest database of trusted experimental protocols

124 protocols using b cell isolation kit

1

Isolation and Stimulation of Mouse B Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Primary mouse B cells isolated from the peritoneal cavity or spleen of C57BL/6J mice were isolated by use of kits purchased from Miltenyi Biotec including B cell Isolation kit (130–090–862), CD19 MicroBeads (130–052–201) and B-1a Cell Isolation Kit (130–097–413). Sorted CD19+ or B-1a cells were stimulated with LPS (5µg per ml, Sigma), anti-CD40 Abs (10µg per ml; BioXcell) and anti-IgM Abs (5µg per ml; Jackson ImmonoResearch) for 72 hours as described (15 (link)).
+ Open protocol
+ Expand
2

Isolation and Cultivation of Various Immune Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Ramos cells, the human Burkitt’s lymphoma cell line, was purchased from the American Type Culture Collection (Manassas, VA, USA). Primary human B cells were purified from healthy donors using either a RosetteSep Human B Cell Enrichment Cocktail (Stem Cell Technologies, Vancouver, BC, Canada) or a B cell isolation kit (Miltenyi Biotec, Bergisch Gladbach, Germany).
Blood was obtained from healthy donors after obtaining informed consent according to the Declaration of Helsinki. This was approved by the Institutional Review Board at Seoul National University Hospital. Human monocytes and plasmacytoid dendritic cells (PDCs) were isolated using human monocyte isolation kit II (Miltenyi Biotec) or human plasmacytoid dendritic isolation kit (Miltenyi Biotec). Murine bone marrow-derived macrophages (BMMs) were generated by culturing murine bone marrow cells in the presence of 10 ng/mL M-CSF (Sigma-Aldrich, St Louis, MO, USA) for 7 days.
+ Open protocol
+ Expand
3

Cell Purification and Transfection Protocols

Check if the same lab product or an alternative is used in the 5 most similar protocols
Mouse embryonic fibroblasts (MEF) prepared from 13.5 dpc embryos and 293T cells were cultured in DMEM supplemented with 10% fetal bovine serum (FBS). CD4+, CD8+, CD19+ and CD11c+ cells were purified from the spleen with MACS columns (Miltenyi Biotech). Resting B cells were purified from spleen with B cell isolation kit (Miltenyi Biotech). Bone marrow derived dendritic cells were obtained by culture of bone marrow cells in RPMI1640 supplemented with 10% FCS for 7 days with human Flt3L (50 ng/ml). For transfections, cells were transiently transfected with Effectene (QIAGEN). To generate stable NIH3T3 cell transformants, cells were transfected with pCAG-PDLIM1 or empty vector and selected with G418 (500 mg/ml) for 14 days. For the reporter assay, 293T cells were transfected with the ELΑΜ−1 luciferase construct and expression plasmids encoding p65 and PDLIM1, or with the pGL4-NF-κB luciferase construct and expression plasmids encoding TRAF6, MyD88 or IKKβ and PDLIM1. Total amounts of transfected DNA were kept constant by supplementing with control plasmids. Luciferase activity was measured according to the manufacturer’s protocol in the Dual Luciferase Reporter System (Promega). Alternatively, MEF were transfected with the pGL4-NF-κB luciferase construct together with or without the PDLIM1 vector, then stimulated with LPS or poly (I:C) for 5 hr and luciferase activity was measured.
+ Open protocol
+ Expand
4

In vitro Germinal Center B Cell Generation

Check if the same lab product or an alternative is used in the 5 most similar protocols
Co-cultures using the Nojima feeder cells were conducted as previously
described (Nojima et al., 2011 (link)). Spleens
were collected from C57BL/6 wild type mice and naïve B cells were
magnetically purified using a B cell isolation kit (#130–090-862,
Miltenyi Biotec) according to manufacture’s instructions. The purified B
cells were labelled with Cell Trace Violet (CTV) (#C34571, Thermo Fisher)
according to manufacturer’s instructions, and then co-cultured for 72h
with Nojima feeder cells in complete media supplemented with recombinant murine
IL-4 (10ng/μL, #214–14, PeproTech). These in
vitro
derived GC (iGC) B cells were flow cytometry-purified to
assess binding of Bcl6 to the γ1-GLT promoter by
chromatin immunoprecipitation (ChIP).
+ Open protocol
+ Expand
5

NK cell and leukemic blast phenotyping

Check if the same lab product or an alternative is used in the 5 most similar protocols
PBMCs were immunostained with CD56 and CD3 monoclonal antibodies (mAb) to identify the NK population (CD56+CD3-), and CD10/CD19 mAbs (BD Biosciences) to exclude ALL blasts. NK cells were analyzed for expression of NCRs (NKp30, NKp44, NKp46), activating/inhibitory C-type lectins (NKG2D/NKG2A), and KIRs (KIR2DL1/S1, KIR2DL2/L3, KIR3DL1) (Biolegend). Blasts were analyzed for expression of relevant NK ligands: HLA-A/B/C (ligands for inhibitory KIRs), MHC class I chain-related genes A/B (MICA/B, ligands for NKG2D), HLA-E (ligand for NKG2A), and HLA-DR4/5 (Biolegend). Controls for blast phenotyping included negatively-selected healthy B cells using the B Cell Isolation Kit (Miltenyi Biotec, Germany). Cells were acquired using an LSRII Cytometer (BD Biosciences) and analyzed using FlowJo software version 7.6 (Tree Star, San Carlos, CA).
+ Open protocol
+ Expand
6

Isolation and Analysis of B Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
B cells from inguinal, brachial and axillary lymph nodes, or from spleen, were isolated by negative selection using the B Cell Isolation Kit from Miltenyi Biotec. B cells were cultured in RPMI 1640 Medium (Dutch Modification) (Life Technologies) supplemented with 5% FCS, antibiotics, 2 mM L-glutamine, 5 μM β-mercaptoethanol and 1 mM sodium pyruvate. In some experiments LPS (10 μg/ml, E. coli O127:B8 Sigma Aldrich) was used for cell stimulation.
Total cell extracts were prepared by incubating cells in RIPA buffer (50 mM Tris-HCl, pH 7.4, 150 mM NaCl, 1% NP-40, 0.1% SDS and 0.5% sodium deoxycholate) supplemented with protease inhibitors (Protease inhibitor cocktail 3, Cat. No. p8340, Sigma). After 15 minutes at 4°C, cell extracts were centrifuged and protein concentration in the supernatant was measured using a BCA protein assay (Pierce). 10% polyacrylamide-SDS gels were loaded with the indicated amount of protein extracts (10–20 μg per lane). Proteins were transferred to nitrocellulose membranes, and AUF-1 and tubulin proteins were detected with specific primary antibodies (see S2 Table). Blots were subsequently incubated with specific HRP-conjugated secondary antibodies and detected by enhanced chemiluminescence (Amersham Pharmacia Biotech).
+ Open protocol
+ Expand
7

Quantifying MHC Class II Expression

Check if the same lab product or an alternative is used in the 5 most similar protocols
B cells were purified from spleens of MHCIIb/b, MHCIIb/null, and MHCIInull/null mice using magnetic separation with a B cell isolation kit according to the manufacturer’s instructions (130-090-862, Miltenyi Biotec). RNA was purified using TRI Reagent and the Direct-zol RNA Microprep kit (R2061, Zymo Research), and cDNA was generated using iScript cDNA synthesis kit (1708890, Bio-Rad). Digital droplet PCR was performed on a QX200 (Bio-Rad), multiplexing a FAM GAPDH assay (dMmuCPE5195282, Bio-Rad) and H2-Aa primer and HEX probe set (forward: CAATTGGCAAGCTTTGACCCC, reverse: TTGGGGAACACAGTCGCTTG, probe: [HEX]CCACCCCAGCTACCAATGAGGC[MGBEQ]).
+ Open protocol
+ Expand
8

Purification of DCs, CD4+ T cells, and B cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
For the purification of DCs, single‐cell suspensions of BL6 mouse splenocytes were prepared as previously described.8 CD11c+ DCs were enriched by positive selection with anti‐CD11c magnetic beads (#130‐52‐001; Miltenyi Biotec, Bergisch Gladbach, Germany). Untouched CD4+ T cells were isolated from single‐cell suspensions of splenocytes and lymph node cells from naive (non‐immunized) BL6 and OT2 mice with the CD4+ T Cell Isolation Kit (#130‐104‐454; Miltenyi Biotec). Untouched B cells were isolated from single‐cell suspension of splenocytes and lymph node cells from naive BL6, SW‐HEL and b12 mice with the B‐Cell Isolation Kit (#130‐90‐862; Miltenyi Biotec). All isolations were performed according to the manufacturer's instructions. The resulting cells were routinely >98% pure.
+ Open protocol
+ Expand
9

Naive B Cell Activation Assay

Check if the same lab product or an alternative is used in the 5 most similar protocols
Splenocytes of Ifit2tm1.1Ebsb and Prdm11tm1.1ahl mutant and wild type littermates (males, n = 5, 7–12 weeks of age) were isolated and enriched for naȉve B cells by MACS using the B cell isolation kit (Miltenyi). Purity of B cells was controlled by FACS analysis (B220 staining, and CD4 and CD8 T cell control staining). Both total cells and purified B cells were cultivated in 200 μl/well RPMI complete plates (100,000 cells/well). For T cell stimulation total cells were incubated 4 days with 20 U/ml IL-2 and anti-CD3 in varying concentrations (0.05, 0.5 and 5.0 μg/ml). Purified B cells were stimulated 8 days by incubation with 1 μg/ml anti-CD40 and 1 ng/ml IL-4 or 5 μg/ml anti-CD40 and 10 ng/ml IL-4. The number of viable cells was determined by CellTiter-Glo Assay (Promega) and IgE concentration in the supernatant was measured by ELISA.
+ Open protocol
+ Expand
10

Isolation and Characterization of NK Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
NK cells were isolated from bulk splenocytes of B6SLy1-and B6wt littermates using either DX5 positive selection (for experiments described in Fig. 3E) or through the use of the NK isolation kit (no-touch NK cell Isolation Kit II) with purity of >85 % confirmed by flow cytometry on multiple occasions (Fig. S1D). Bone marrow-derived CD122+ NK progenitors were obtained by flow cytometric sorting. T lymphocytes were obtained by CD90.2+ selection and B cells by B cell isolation kit (Miltenyi Biotech). For some experiments, Lymphokine Activated Killer (LAK) cells were generated from the spleen by IL-2 activation in vitro. All antibodies for flow cytometry were primarily fluorochrome conjugated and purchased from either BD or eBioscience.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!