The largest database of trusted experimental protocols

8 protocols using acc 017

1

Immunoblot Analysis and Cell Surface Biotinylation of Podocyte Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
Methods used for immunoblot analysis from podocyte lysates have been described in detail previously [36 (link),48 (link)]. Filters were probed using primary antibodies, washed, incubated with horseradish peroxidase-conjugated secondary antibodies, and visualized using chemiluminescence. Methods for cell surface biotinylation assays to measure steady-state surface abundance of TRPC6 channels were also described previously [37 (link),39 (link),47 (link)–49 (link)]. Rabbit antibodies against TRPC6 (ACC-017) and TRPC5 (ACC-020) were obtained from Alomone Labs (Jerusalem, Israel), antibodies against podocin (sc-21009) and β3-integrin (sc-14009) were obtained from Santa Cruz (Santa Cruz, CA).
+ Open protocol
+ Expand
2

Immunohistochemical Analysis of TRPC6 in Lung Tissue

Check if the same lab product or an alternative is used in the 5 most similar protocols
IHC was performed on paraffin-embedded lung tissue sections following standard methods. Lung sections (5 μm) were deparaffinized, rehydrated, treated for endogenous peroxidase inhibition and antigen retrieval and then incubated overnight at 4 °C with primary anti-TRPC6 antibody (dilution 1:100) (ACC-017; Alomone Labs, Israel), followed by 30-min incubation with Horseradish peroxidase-conjugated secondary antibody (dilution 1:500). Binding was visualized with DAB and counterstained with hematoxylin. Staining images were taken by a confocal laser scanning microscopy (BX51; Olympus, JPN).
+ Open protocol
+ Expand
3

Western Blot Analysis of TRP Channels

Check if the same lab product or an alternative is used in the 5 most similar protocols
Conditions for SDS–PAGE and western blotting were as previously described [8 (link)]. Polyvinylidene fluoride membranes were properly blocked in 5% bovin sieric albumin (BSA) in TNT buffer (0.1 M Tris-Cl pH 7.5, 150 mM NaCl, 0.1% Tween-20) for 30 s and then incubated over night with anti-TRPA1 (#ACC-037, Alomone, 1:200), anti-TRPC3 (#ACC-016, Alomone, 1:500), anti-TRPC6 (#ACC-017, Alomone, 1:200), or anti-TRPV2 (SAB1101376, Sigma, 1:500), anti-β-actin (A5316, Sigma, 1:1000) primary antibodies, following manufacturer’s instructions. The membrane was then washed using TNT containing 0.1% Tween 20 and incubated with the appropriate HRP-conjugated secondary antibodies (SantaCruz, Dallas, TX, USA). Membranes were treated with either Femto or Dura enhanced chemiluminescence (ECL) reagents (ThermoFisher, Thermo Fisher Scientific, Waltham, MA, USA) for 1 or 5 min respectively, and exposed by Amersham Imager 600 (GE Healthcare, Little Chalfont, UK). To quantify the differences in protein expression, the ratio between TRP channels and actin expression was evaluated using Fiji, ImageJ software (https://imagej.net/Fiji). Whole scans of the immunoblots were shown in Figures S6 and S7.
+ Open protocol
+ Expand
4

Immunoblotting of TRPC Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
These methods were described previously [13 (link)]. Renal cortex was homogenized in M-PER™ mammalian protein extraction buffer (Thermo Fisher Scientific) and sonicated on ice. The homogenates were subjected to centrifugation at 13,000 rpm for 30 min. Protein concentrations of the supernatants were determined with Bradford reagent (Bio-Rad). Rabbit antibodies against TRPC6 (ACC-017) and TRPC3 (ACC-016) were from Alomone Labs. The TRPC6 antibody targets motifs encoded by exon 1 located in the amino-terminal and upstream of the deletion in the Trpc6del allele. We also used a polyclonal TRPC6 antibody from Booster Biological Technology that targets residues 248–264 in the rat channel, downstream of the deletion. A mouse monoclonal antibody against TRPC5 was from NeuroMAB. We also used a rabbit polyclonal antibody against TRPC5 from Alomone (ACC-020). All TRPC antibodies were used at a dilution of 1:1000. A mouse monoclonal antibody (clone 1A4) against α-smooth muscle actin (SMA) was from Sigma-Aldrich.
+ Open protocol
+ Expand
5

Immunohistochemistry analysis of kidney tissue

Check if the same lab product or an alternative is used in the 5 most similar protocols
After 4 µm sections were collected, the paraffin on the sections was removed by xylene, and then hydrated in graded ethanol. The sections were incubated for 10 min in 10 mmol/L sodium citrate buffer in microwave oven for the purpose of retrieve antigenicity. After that, the sections were incubated with antibody against Col-IV (ab6586 Abcam, Cambridge, MA), TGF-β1 (ab92486 Abcam, Cambridge, MA), and TRPC6 (ACC-017, Alomone Labs, Belmont, CA) overnight at 4 °C. The sections were washed fully by phosphate-buffered saline (PBS) solution and incubated with second antibody (Shanghai Changdao, Co., Inc., Shanghai, China) for 30 min. PBS solution was used to replace specific antibody for the purpose of obtaining negative controls. Brownish yellow granular in the glomerulus were considered as positive areas. Semi-quantitative evaluation was performed by Image-Pro Plus6.0 (NIH Image J system, Bethesda, MD).
+ Open protocol
+ Expand
6

Immunohistochemical Analysis of TRP Channels

Check if the same lab product or an alternative is used in the 5 most similar protocols
Slides were deparaffinized, rehydrated, and heated in citrate buffer pH 6 for antigenic retrieval. After blocking for endogenous peroxidase with 3% hydrogen peroxide, the following antibodies were incubated: TRPA1 (#ACC-037 1:500, 1 h, Alomone Labs, Jerusalem, Israel), TRPV2 (SAB1101376 Sigma, 1:1000, 1 h), TRPC3 (#ACC-016 Alomone, 1:500, 1 h), TRPC6 (#ACC-017 Alomone, 1:300, 1 h). Immunohistochemistry was performed using the streptavidin-biotin-peroxidase method with diaminobenzidine as the chromogen (Kit LSAB, Dakocytomotion, Glostrup, Denmark). Slides were finally counterstained with haematoxylin. Negative controls were obtained after omission of the primary antibody or incubation with an irrelevant antibody. For cryo-sections, retinas were fixed overnight with 4% PFA, rinsed in PBS and then incubated with 30% sucrose before OCT embedding. Retina sections were blocked and permeabilized in PBS 0.25% triton, 5% FBS, 1% BSA for 2 h and incubated overnight at 4 °C with the rabbit anti-TRPA1 antibody (#ACC-037 Alomone, 1:100) and the rat anti-CD31 (Becton Dickinson, 1/100). After washes, sections were incubated with secondary antibody donkey anti-rabbit A488 and donkey anti-Rat A594 for 2 h at room temperature. Sections were then washed and stained with DAPI before mounting in Mowiol. Sections were imaged with a Carl Zeiss AxioImager Z1-Apotome.
+ Open protocol
+ Expand
7

Immunofluorescence Staining of TRPC6

Check if the same lab product or an alternative is used in the 5 most similar protocols
The cells cultured on confocal dishes were fixed with 4% formaldehyde in 0.1 M PBS for 15 min and washed three times with 0.1 M PBS. Further details were performed as previously described 366. The cells were incubated with primary specific antibodies against TRPC6 (ACC-017; Alomone Labs, ISR) at 4 °C overnight and rewarmed for 30 min subsequently. Following 3 washes with PBS, the cells were incubated with fluorescein isothiocyanate (FITC)-conjugated secondary antibody (Life Technology, USA) for another 1 h. The nuclei were stained by the fluorescent DNA-binding dye 136 4′, 6-diamidino-2-phenylindole dihydrochloride (DAPI) (Roche, CHN) for 15 min. Fluorescence pictures were taken under a confocal laser scanning microscopy (SP8; Leica TCS, GER).
+ Open protocol
+ Expand
8

Antibody Detection of TRPC Ion Channels

Check if the same lab product or an alternative is used in the 5 most similar protocols
These methods were previously described in detail [18 (link)]. Rabbit antibodies against TRPC6 (ACC-017) and TRPC3 (ACC-016) were obtained from Alomone Labs (Jerusalem, Israel). A mouse monoclonal antibody against TRPC5 was obtained from NeuroMAB (Davis, CA, USA). All TRPC antibodies were used at a dilution of 1:1000. The antibody against vimentin (cloneV9) was from DAKO (Agilent, Santa Clara, CA, USA) and used at a dilution of 1:1000. The antibody against NOD-, LRR-, and pyrin domain-containing protein 3 (NLRP3) was obtained from LSBio (Seattle, WA, USA), and was used at a dilution of 1:1000.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!