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55 protocols using vcam 1

1

Leukocyte Adhesion Dynamics Under Flow

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To investigate leukocyte adhesion, we used a human flow chamber system. In brief, glass capillaries were coated with P-selectin (20 µg/ml; R&D Systems) and VCAM-1 (20 µg/ml; R&D Systems) or P-selectin (20 µg/ml; R&D Systems), VCAM-1 (20 µg/ml; R&D Systems) and SDF1 (20 µg/ml; R&D Systems) for 2 h. Chambers were blocked with 1% casein (Thermo Fisher Scientific) for 1 h and afterward perfused with isolated CD4 cells at a constant shear stress of 1 dyne/cm2. To investigate the capturing of CD4 cells, flow chambers were coated with P-selectin (20 µg/ml) alone and were perfused with isolated CD4 cells at a constant shear stress of 1 dyne/cm2 for 2 min and, subsequently, the number of rolling cells per field of view was determined. Videos were obtained with an inverted TS100 transmission light microscope (Nikon) equipped with a 10×/0.25 NA objective and a digital camera (Pixelfly; Cooke Corporation).
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2

Synthesis and Characterization of Integrin Activator 7HP349

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The complete chemical synthesis of integrin activator 7HP349 is included in the patent50 . For all in vitro assays, compounds were dissolved in DMSO to make a series of stock solutions such that a 1:100 dilution in assay buffer or media would yield the desired final working concentrations in 1% DMSO (vehicle). For in vivo studies, 7HP349 was formulated in a vehicle made from individual components on a weight/weight basis. The vehicle is a PBS solution, pH 7.4, containing 17% Tween 80, 16% glycerol. 7HP349 was prepared at 0.02, 0.2, and 2 mg/g (Ovalbumin study) or 0.5 mg/g (Chagas study). Vehicle and 7HP349 solutions were filtered through a 0.22 µm filter and pipetted into sterile septum vials. The final compound concentration (mg/mL) was verified by HPLC compared to a standard curve. Human VCAM-1 and ICAM-1 were purchased from R&D Systems (Minneapolis, MN). Antibodies were purchased from ABD Serotec (Raleigh, NC) (HP2/1 [anti-α4] and 38 [anti-αL]). The mAb 33B6 [anti-β1] was a gift from B. McIntyre (MD Anderson Cancer Center, Houston, TX). The cell lines Jurkat, HSB, and 70Z/3 were obtained from American Type Culture Collection (Manassas, VA) and were maintained in recommended culture media.
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3

Glycocalyx and Endothelial Dysfunction Markers

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Using enzyme-linked immunosorbent assays, we measured serum hyaluronan (R&D Systems, Minneapolis, MN) and syndecan-1 (Diaclone, Besancon, France) as markers of the glycocalyx, and serum von Willebrand Factor (vWF), (Assaypro, Cambridge, MA) and vascular cell adhesion molecule (VCAM-1), ( R&D Systems, Minneapolis, MN) as markers of endothelial dysfunction. All measures were performed in duplicate.
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4

Quantifying Cell Adhesion Molecules

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We used enzyme‐linked immunosorbent assay kits to evaluate the serum levels of VCAM1 (R&D), PECAM1 (R&D), NCAM1 (RayBio), ICAM1 (R&D), and ICAM2 (MyBioSource). Each assay was measured in duplicate for each sample at the same time.
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5

CLL Cell Adhesion Assay with VCAM-1

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Falcon culture slides were coated with 7.5 µg/ml VCAM-1 (R&D Systems) overnight, washed, and blocked with 2% human serum albumin (Merck Millipore). Purified CLL cells were incubated for 1 h with or without 1 µM ibrutinib, added to the slides, and allowed to adhere for 30 min at 37°C in the presence or not of 5 µg/ml F(ab)2 anti-IgM before fixation with 4% paraformaldehyde. Slides were stained with primary anti-CD49d antibody (clone AHP1225; Bio-Rad) and Cy3-conjugated secondary anti–rabbit antibody. Images were taken with an Olympus IX81 microscope. For quantification, high-resolution images for cluster analysis were acquired on a Leica TCS SP5 II laser scanning microscope using a 63×/1.4-NA oil-immersion objective (Leica), and the number of clusters was analyzed using ImageJ software.
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6

Microfluidic Adhesion Assay for CLL Cells

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Six-channel μ-slides (Ibidi) were coated with VCAM-1 (R&D Systems) at 4°C overnight, washed, and blocked with 2% human serum albumin. Purified CLL cells were incubated with or without 1 µM ibrutinib and 5 µg/ml F(ab)2 anti-IgM. The cells were perfused at 0.5 dyn/cm2 for 1 min at 37°C over the coated substrate. The perfusion period was recorded and digitalized. Analysis of the video-recorded segments was done using customized image analysis software (Wimasis). Arresting cells were defined as cells remaining stationary for at least 3 s on the substrate as previously described (Hartmann et al., 2009 (link); Ganghammer et al., 2015 (link)).
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7

Molecular Markers of Angiogenesis and Inflammation

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HEGU [7 (link)] and licoricidin [10 (link)] were prepared as previously described. Antibodies against VEGF-A, platelet endothelial cell adhesion molecule (PECAM-1, CD31), MMP-9, TIMP-1, ICAM-1, and VCAM-1 were obtained from Santa Cruz Biotechnology (Santa Cruz, CA, USA). Antibodies against Ki67 and HIF-1α were obtained from Abcam (Cambridge, UK). An antibody against mouse CD45 and enzyme-linked immunosorbent assay (ELISA) kits for mouse/rat MMP-9, TIMP-1, ICAM-1, and VCAM-1 were purchased from R&D Systems (Minneapolis, MN, USA). Antibodies to iNOS and COX-2 were obtained from BD Transduction Laboratories (Lexington, KY, USA). If not otherwise specified, all other materials were purchased from Sigma (St. Louis, MO, USA).
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8

Biomarker Panel for Chronic Disease

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Serum samples of creatinine, albumin (bromocresol purple), calcium, phosphate, intact parathyroid hormone (iPTH), ferritin, cholesterol, triglyceride (TG), hemoglobin, high-sensitivity CRP (hsCRP; by nephelometry assay; CV, 5%) were measured by routine methods at the Department of Laboratory Medicine, Karolinska University Hospital at Huddinge. Commercial ELISA kits were used to determine serum vascular cell adhesion protein-1 (VCAM-1) (R&D Systems, Minneapolis, MN). Plasma concentrations of IL-6 (CV, 4%), TNF, (CV, 2%–5 %) and insulin-like growth factor-1 (IGF-1, CV, 4.3%) were measured on an Immulite TM Automatic Analyzer (Siemens Healthcare; Diagnostics Products Ltd.) according to the manufacturer’s instructions.
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9

Vascular Biomarkers in Metabolic Profiling

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TC, HDL-C, TG, and Fasting plasma glucose concentration (FPG) were measured by the autoanalyser (HITACHI, Tokyo, Japan) with commercially available kits (Randox Laboratories, Crumlin, UK). Serum sPLA2-IIa protein was determined using a sandwich-type enzyme-linked immunosorbent assay (ELISA) kit (Cayman Chemicals, Ann Arbor, MI, USA). Serum sPLA2 activity was measured by a selective fluorometric assay (Cayman Chemicals) by using diheptanoyl thio-phosphocholine as fluorescent substrate. We used a solution of 0.1U bee venom PLA2 as a positive control to hydrolyze fluorescent substrate completely. The hydrolysis of substrate in the absence of serum sample was used as negative control. The intra-assay coefficient of variation was 4.2%. ELISAs were used to determine VCAM-1, ICAM-1, E-selectin, and P-selectin levels (R & D Systems, Minneapolis, MNUSA). All measurements were performed according to the manufacturers’ instructions. Each sample was tested in duplicate, and the means of the duplicates were used for the statistical analysis.
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10

Evaluating Immune Cell Activation and Apoptosis

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The reagents were as follows: fibronectin (FN) (Sigma; Rehovot, Israel) VCAM-1(R&D Biosystems, Minneapolis, MN, USA); BSA (Sigma); XTT cell proliferation kit (Biological Industries, Bet Haemek, Israel); FAM FLICA Caspase-3,7 and caspase-1 detection kit (Immunochemistry Technologies LLC, MN, USA); anti Cd49d, anti cd49e (Serotec, NC, USA); Staphylococcus aureus Cowan I (SAC) (Calbiochem-Behring Corp., La Jolla, CA, USA). LPS (Sigma); mouse anti-rat CD68 (ED1) (Serotec); rabbit anti-rat FN (Cedarlane, Burlington, ON, Canada); anti-mouse IL-18 (R&D Biosystems); anti-mouse IL-1β (Santa Cruz, Santa Cruz, CA, USA); anti αTubulin (Santa Cruz); anti-rat Thy-1.1(Cederlane); sheep anti-rat GBM (Probetex, San Antonio, TX, USA); rat IL-1β, IL-18, and TNFα ELISA kits (BiosourceThermo Fisher, Waltham, MA, USA); rat connective tissue growth factor (CTGF) and monocyte chemoattractant protein-1 (MCP-1) ELISA kits (MyBiosource, San Diego CA, USA). Creatinine and albumin assay kits (Abcam, San Francisco, CA, USA); AS101 (supplied by M. Albeck, Bar-Ilan University, Ramat Gan, Israel).
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