Fm1 43
FM1-43 is a fluorescent styryl dye used for the labeling and visualization of cell membranes and synaptic vesicle recycling in live cells. It is a lipophilic dye that inserts into the outer leaflet of the plasma membrane.
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145 protocols using fm1 43
Evaluating Neurotransmitter Vesicle Dynamics
Quantification of FM1-43 Fluorescence
Quantifying Prey Ingestion in Naegleria
Naegleria sp. (1500 cells/mm2) was co-cultured with FM1–43-stained prey (9.0 × 104 cells/mm2) in 1 mL of BG-11−16 in a well of 24-well culture plates at 25 °C for 4 h in the dark for Naegleria sp. cells to ingest the prey. Then, the liquid medium and free bacterial prey were removed from the well as much as possible by gentle rinsing with BG-11−16, and Naegleria sp. adhering to the bottom of the plate was resuspended in 300 μL of BG-11−16. Then, the samples were put on MAS-coated slide glass (#S9115, Matsunami) and incubated at 25 °C in the dark for 30 min to immobilize the Naegleria sp. cells on the glass and inhibit them from continuing to ingest bacterial prey. Then (hour 0), the glass on which Naegleria sp. cells were immobilized was incubated in a Petri dish with moist filter paper at 25 °C under dark or light (200 µE m−2 s−1) conditions. Micrographs by fluorescence microscopy were taken every hour from hour 0 to 4. The fluorescence intensity of prey that in Naegleria sp. cells (per area of the cells) and outside the cells (as a control) (per area) was determined with ImageJ software65 .
Rhamnolipid Quantification in P. aeruginosa
Quantifying Cytotoxic T-Cell Dynamics
Real-time Exocytosis Imaging with FM1-43 Dye
FM1–43 Labeling of Mouse Cochlear Sensory Epithelia
Optogenetic Control of Lateral Line Hair Cells
To create a fish line that expresses the Channelrhodopsin-2 (ChR2) optogenetic protein solely in the hair cells of the lateral line, approximately 2 kb of DNA upstream of the start codon of the lhfpl5b gene was cloned into the p5E plasmid of the recombination-based multisite Gateway cloning system (ThermoFisher). A Tol2 transposon backbone was then used to create the injectable expression plasmid lhfpl5b2028:ChR2-EYFP-PA. This plasmid was then co-injected with transposase mRNA into single-cell embryos (Kwan et al., 2007 (link)) to create the Tg(lhfpl5b2028:ChR2-EYFP-PA) zebrafish line.
Imaging Hair Cell Fluorescence
FM1-43 Dye Labeling of Auditory Hair Cells
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