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14 protocols using acetic acid d4

1

NMR Analysis of Chitosan-PNIPAAm Copolymers

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1H NMR spectra of the samples were recorded with a 400 MHz Bruker®Avance III High Resolution spectrometer (Bruker BioSpin GmbH, Rheinstetten, Germany) using D2O with acetic acid-d4 (Sigma-Aldrich) as a solvent. The solutions (1% w/v) of CS, PNIPAAm and synthesized copolymer were prepared. Chemical shifts were reported in ppm using the signal of D2O (4.79 ppm) as internal standard. To estimate the molar percentages of CS and NIPAAm in the copolymers, the ratio of the integration of the signal at 1.96 ppm corresponding to CS to that of the signal at 1.01 ppm corresponding to PNIPAAm side chains was used. The molar percentages of NIPAAm and CS were calculated as follows: NIPAAm%=( Hn·100) ( Hn)+( A3:0.24)
CS%=100%NIPAAm%
where H is the peak area of the isopropyl group of NIPAAm in the grafted chain, n is the number of isopropyl group protons in NIPAAm, A is the peak area of the acetyl group signal, 3 is the number of acetyl group protons, and 0.24 is the degree of acetylation of CS.
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2

Peptide Synthesis Reagents Procurement

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Amino acids, N,N′-diisopropylethylamine (DIEA), N,N′-Disuccinimidyl carbonate (DSC), Fmoc chloride, (1-cyano-2-ethoxy-2-oxoethylidenaminooxy)dimethylamino-morpholino-carbenium hexafluorophosphate (COMU), chloro-N,N,N′,N′-tetramethylformamidinium hexafluorophospate (TCFH) and triphosgene (BTC) were purchased from Chem Impex Int’l, Inc. Reagents such as piperidine, lithium chloride, sodium cyanoborohydride (NaBH3CN), triisopropylsilane (TIPS), sodium acetate-d3, acetic acid-d4, and D2O were purchased from Sigma Aldrich. Reagents such as hydrazine monohydrate and 2,4,6-collidine were purchased from Alfa Aesar. Trifluoroacetic acid, glacial acetic acid, sodium bicarbonate, and solvents were purchased from Fisher. Reagents including HBTU and PyBOP were purchased from Oakwood Chemical. 1-Methylimidazole (NMI) and 1-chloro-N,N,2-trimethylpropenylamine (Ghosez’s Reagent) were purchased from Acros Organics.
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3

Extraction and Quantification of Short-Chain Fatty Acids

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The reference standards, including acetic acid (purity ≥ 99%), propionic acid (purity ≥ 99.5%), butyric acid (purity ≥ 99.5%), valeric acid (purity ≥ 99.8%), and acetic acid-d4 (purity ≥ 99.5%) were obtained from Sigma-Aldrich (South Korea), and the butyric acid-d7 (purity ≥ 98%) was obtained from Cayman Chemical (Ann Arbor, MI, USA).
The reagents, including 37% HCl, MTBE (purity ≥ 99.5%), DE (purity ≥ 99.9%), chloroform (Chl, purity ≥ 99.5%), n-hexane (HA, purity ≥ 95%), bovine serum albumin (BSA), phosphate buffer saline (1.0 M), and dextran-coated charcoal were obtained from Sigma-Aldrich (Darmstadt, Germany), and distilled water was obtained from J. T. Baker (Phillipsburg, NJ, USA).
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4

Dynamic Covalent Hydrogels from Hyaluronic Acid and Chitosan

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Hyaluronic acid (Contipro, high molecular weight) and chitosan from crab shells (Sigma Aldrich, highly viscous, St. Louis, MO, USA,) were used for the development of the dynamic covalent hydrogels. The deacetylation degree of chitosan was measured by 1H-NMR (85%). Gel permeation chromatography (GPC) was employed for the determination of the average molecular weights of HA and CHI polymers, being 2.1 × 106 ± 1.01 × 105 g/mol and 8.7 × 105 ± 4.0 × 104 g/mol, respectively. The acetic acid (for analysis, 99.8%), methanol (pure, pharma grade), ethanol absolute (for analysis), succinic anhydride (≥99%), sodium (meta)periodate (≥99%), ethylene glycol (≥99%), sodium phosphate monobasic (≥99%), sodium hydroxide (pure, pharma grade), ninhydrin reagent (2% solution), deuterium oxide (99.9% atom D), and acetic acid-d4 (≥99.5% atom D) were purchased from Sigma Aldrich.
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5

Antioxidant Enzymes Assay Protocol

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DSS (MW: 36–50 kDa) was purchased from MP Biomedical, LLC (Illkirch-Graffenstaden, France). Hydrogen peroxide (H2O2) (30%) was purchased from Junsei Chemical Co. Ltd. CAT, Gpx, SOD, o-dianisidine, and hexadecyltrimethylammonium bromide (HTAB) were purchased from Sigma Aldrich (St. Louis, MO, USA). FITC-dextran was purchased from Sigma-Aldrich (St. Louis, MO, USA). MTBSTFA was purchased from Sigma-Aldrich (St. Louis, MO, USA). The standards of acetic, butyric, and propionic acids were purchased from Sigma Aldrich (St. Louis, MO, USA). acetic acid-d4 was purchased from Sigma-Aldrich (St. Louis, MO, USA).
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6

Dutasteride-Loaded Chitosan Oligomer Nanoparticles

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Lauric acid and stearic acid were purchased from Tokyo Chemical Industry (UK). Chitosan oligomer (CSO; MW < 3000 Da) and dutasteride (purity >98.0%) were obtained from Carbosynth (Newbury, UK). Ethanol (96% v/v analytical grade), acetic acid-d4 (99.9 atom %D), 1-ethyl-3-(3-dimethylaminopropyl), carbodiimide hydrochloride (EDC.HCl), and Sephadex G-50 were obtained from Sigma-Aldrich (Dorset, UK). Acetic acid glacial (analytical reagent), water (HPLC grade), and acetone were purchased from Fisher Scientific (Loughborough, UK). Deuterium oxide (99.9 atom %D) was purchased from Cambridge Isotope Lab. Inc. (Tewksbury, MA, USA). Phosal® 53 MCT and Lutrol® micro 68 were gifted by Lipoid GmbH (Ludwigshafen, Germany) and the BASF Group (Ludwigshafen, Germany), respectively. Deionised water was produced in-house (PURELAB, ELGA, High Wycombe, UK).
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7

DPPH Radical Scavenging Assay

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2,2-Diphenyl-1-picryl hydrazyl radical (DPPH), spectrophotometric grade methanol (≥99.9%), and the nonionic detergent Triton X-100 were purchased from Fisher Scientific (Pittsburgh, PA). Citric acid monohydrate (>99% purity) and sodium phosphate monobasic (>98% purity) were purchased from EMD Millipore (San Diego, CA). Acetic acid-d4 (99.5 atom % D), deuterium oxide (99.9 atom % D), and formic acid (~98%) were purchased from Sigma-Aldrich (St. Louis, MO). Doubly distilled water was used throughout the experiments.
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8

Detailed Synthesis and Characterization Protocol

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CS (low-MW CS, DDA: >75 %), deuterium oxide, deuterium chloride, and acetic acid-d4 for nuclear magnetic resonance (NMR) measurements, and rhodamine B (MW: 479.01; λex: 553 nm; λem: 627 nm; octanol–water partition coefficient (log KOW): 1.95) were purchased from Sigma Aldrich (Seoul, Korea). The following chemicals were reagent grade and were used as purchased from Sigma Aldrich: acetic acid, sodium hydroxide, sodium chloride, hydrochloric acid, and sodium acetate. TFA was obtained from Junsei Chemical Co., Ltd. (Tokyo, Japan). The cellulose membrane (MWCO 3500) for dialysis was purchased from Membrane Filtration Products, Inc. (Seguin, TX, USA). Qualitative filter paper (Ø = 70 mm; pore size = 0.45 μm) was purchased from Whatman (Maidstone, UK). A liquid prepolymer (Sylgard 184A) and a curing agent (Sylgard 184B) for the polydimethylsiloxane (PDMS) molding were purchased from Dow Corning (Midland, MI, USA). Agar powder for the in vitro test was purchased from Samchun Chemical (Pohang, Korea).
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9

Metabolite Identification via LC-MS

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LC–MS-grade water and acetonitrile (ACN) were purchased from Fisher Scientific (Houston, TX); triphenylphosphine (TPP) and 2- hydrazinoquinoline (HQ) from Alfa Aesar (Ward Hill, MA); 2,2′-dipyridyl disulfide (DPDS) from MP Biomedicals (Santa Ana, CA); tylosin tartrate from Ark Pharm (Arlington Heights, IL); acetic acid-d4 from Sigma-Aldrich (St. Louis, MO); glycocholic acid-13C1 from C/D/N Isotopes (Quebec, Canada). The metabolite standards used for structural confirmation were from Sigma-Aldrich, Fisher Scientific, AlfaAesar, Ark Pharm (Libertyville, IL), respectively.
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10

Photocrosslinkable Hydrogels from Hyaluronic Acid and Chitosan

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Hyaluronic acid (Contipro, high molecular weight, 2.1 × 10 6 ± 1.01 × 10 5 g/mol (PDI = 1.003)) and chitosan from crab shells (Sigma Aldrich, highly viscous, 8.7 × 10 5 ± 4.0 × 10 4 g/mol (PDI = 1.037), deacetylation degree of 85 % ##determined by 1 H NMR) were used for the formation of photocrosslinkable hydrogels. The average molecular weights were measured by gel permeation chromatography using a PolySep-GFC-P Phenomenex column (Linear 300 × 7.8 mm) and as eluent 0.05 M (for Hyaluronic acid) and acetic acid 0.15 M (for chitosan) (1 mL/min flow). The photoinitiator lithium phenyl-2,4,6trimethylbenzoylphosphinate (LAP), acetic acid (for analysis, ≥ 99.8 %), sodium phosphate monobasic (≥ 99.0 %), sodium hydroxide (pure, pharma grade), methacrylic anhydride, deuterium oxide (99.9 % atom D), acetic acid-d 4 (≥99.5 % atom D), lysozyme (from chicken egg white, ~70,000 U/mg) and hyaluronidase (from sheep testes, type II, lyophilized powder, ≥300 units/mg solid) enzymes were purchased from Sigma Aldrich.
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