The largest database of trusted experimental protocols

60 protocols using fluo 3

1

Megakaryocyte Cell Culture and Uptake

Check if the same lab product or an alternative is used in the 5 most similar protocols
Human MEG-01 cell culture, transfection, siRNA treatment, and mouse bone marrow MK isolation were performed as described (Leven, 2004 (link); Ambrosio et al., 2012 (link)). Oligonucleotides (Sigma-Aldrich) used for siRNA were as follows: negative control (SIC001-10 NMOL), TPC2 siRNA1 (SASI_Hs01_00129376), and TPC2 siRNA2 (SASI_Hs01_00129381). For dextran or Fluo3 uptake experiments, cells were incubated for 16 h at 37°C in medium containing 250 μg/ml dextran-Alexa Fluor 488 or 3 μM Fluo3 (Molecular Probes, Eugene, OR), followed by a 4-h chase period. We previously determined that soluble tracers such as dextran taken up by endocytosis accumulate in PDGs (Ambrosio et al., 2012 (link)). Mepacrine was added to the medium (10 μM), followed by a 5-min incubation at 37°C.
+ Open protocol
+ Expand
2

Isolation and Labeling of Rat Macrophages

Check if the same lab product or an alternative is used in the 5 most similar protocols
Rat femur bones were removed immediately after euthanization under sterile conditions, washed in sterile PBS, and bone marrow were flushed out with fetal bovine serum (FBS) solution through the cut ends of the bones using 1ml syringe. Bone marrow suspension was filtered through a 40 m cell strainer and filtrate was centrifuged at 1800 rpm for 5 minutes at 4°C. Cell pellets were suspended in 1 ml of medium A [500ml DMEM F12, 50ml FBS, 500 l MCSF (macrophage colony–stimulating factor), 5ml fungizone, and 5ml penicillin/streptomycin]. An aliquot of the cell suspension was dissociated by repeated trituration (10 times) to get the viable cell counts with Trypan Blue using Hemacytometer prior to culturing the cells in T-75 cm2 flasks (2×106/flask) in medium A. Fresh media A was replaced every 48 hours. Fully differentiated macrophages were scrapped off on day 8, centrifuged at 1, 800 rpm for 5 min at 4°C, suspended in 1 ml FBS solution, labeled with 5 M Fluo-3 (Invitrogen), centrifugation washed off the unbound Fluo-3, and estimated the total number of cells. Finally, 100 l of Fluo-3 labeled macrophage (2×106 cells) suspension in FBS was infused into the CCA via the implanted catheters using 30.5 G needle. Infiltrated Fluo-3 labeled macrophages around the perivascular or deep brain tissues were analyzed by confocal microscopy.
+ Open protocol
+ Expand
3

Measuring Ca2+ dynamics in myoblasts

Check if the same lab product or an alternative is used in the 5 most similar protocols
Primary myoblasts isolated from E18.5 embryonic muscle were differentiated and then loaded with the fluorescent Ca2+ indicator Fluo-3 (Life Technologies, Grand Island, NY) injected by whole-cell configuration at a final concentration of 200 μM. Following loading, Fluo-3 dye was allowed to diffuse within the cell interior for 5 min. The total change in fluorescence (ΔF/F) was determined from the change in peak fluorescence from initial baseline during stimulation, where F was the fluorescence immediately before the test pulse minus the measured average background (non–Fluo-3) fluorescence before dye injection. The average values of fluorescence change (ΔF) for each test potential (V) were fitted according to: (ΔF)=(ΔF)max/{1 +exp [(VFV)/kF]}, where (ΔF)max =1093 au, VF = −1.4 mV and kF =5.5 mV. Fluorescence emission was measured by fluorometer (Biomedical Instrumentation Group, University of Pennsylvania, Philadelphia, PA). Kurt Beam and Roger Bannister provided Ryr1-YFP cDNA and performed these experiments.
+ Open protocol
+ Expand
4

Intracellular Ca2+ Dynamics Measurement

Check if the same lab product or an alternative is used in the 5 most similar protocols
Changes in intracellular Ca2+ were recorded with Fluo-3 (Molecular Probes) in the whole-cell patch-clamp configuration (see above). The salt form of the dye was added to the standard internal solution for a final concentration of 200 nM. After entry into the whole-cell configuration, a waiting period of >5 min was used to allow the dye to diffuse into the cell interior. A Zeiss LSM 710 was used to excite the dye (488 nm) and measure fluorescence emission (519–585 nm) in the voltage-clamped myotube during 200-ms test pulses. Fluorescence data are expressed as ΔF/F, where ΔF represents the peak change in fluorescence from baseline during the test pulse and F is the fluorescence immediately before the test pulse minus the mean background (non–Fluo-3) fluorescence. The fluorescence change (ΔF/F) for each test potential (V) was fitted according to (ΔF/F)=(ΔF/F)max/{1+exp[(VF-V)/kF]}, where (ΔF/F)max is the maximal fluorescence change, VF is the potential causing half the maximal change in fluorescence, and kF is a slope parameter.
+ Open protocol
+ Expand
5

Neutrophil Calcium Flux Assay

Check if the same lab product or an alternative is used in the 5 most similar protocols
Calcium flux assays were performed as described previously (36 (link)). Isolated neutrophils were suspended at 5 × 106 cells/ml in RPMI/5% FCS/5 mM Hepes (pH7.4) then incubated with 5 μM fluo-3 (Molecular Probes, Eugene, OR) in the presence of F-127 detergent (0.02% -- Molecular Probes) in the dark at 37°C for 30 min with intermittent mixing every 5 min. The cells were washed twice with Ca2+- and Mg2+-free HBSS supplemented with 20 mM Hepes (pH 7.4) then diluted to 5×106 cells/ml and kept at 4°C in the dark until used. Prior to analysis, the cells were aliquoted into FACS tubes, warmed to RT, then analyzed by flow cytometry (FACScan, Becton Dickenson, San Jose, CA) for 40 seconds to establish a baseline reading. Chemokines were then added and the samples analyzed continuously for 3 min. The data were analyzed by averaging fluorescence per 20 second intervals. Peak Ca2+ flux values were calculated by subtracting baseline readings.
+ Open protocol
+ Expand
6

Intracellular Calcium Imaging in Cell Pairs

Check if the same lab product or an alternative is used in the 5 most similar protocols
[Ca2+]i was measured in cell pairs that were AM-loaded with Fluo3 (10 μM; Molecular Probes), excited at 488 nm, and with emitted fluorescence collected at >505 nm. After subtracting background fluorescence, Fluo3 time course signal was normalized to baseline (F/F0).
+ Open protocol
+ Expand
7

Th2 Lymphocyte Calcium Mobilization Assay

Check if the same lab product or an alternative is used in the 5 most similar protocols
Chronically activated human Th2 lymphocytes were prepared as previously described (30 (link)) and were labelled with the dye Fluo-3 (Molecular Probes, Eugene, OR) at a final concentration of 4 μM. Following washing, cells were plated at 300,000 cells per well and stimulated with chemokine at varying concentrations. Ca2+ mobilization was then measured on a 96-well FLIPR System (Molecular Devices, Sunnyvale, CA) as previously described (31 (link)).
+ Open protocol
+ Expand
8

Intracellular Ca2+ Cycling in Aged Rabbit Ventricular Myocytes

Check if the same lab product or an alternative is used in the 5 most similar protocols
Intracellular Ca2+ cycling activity in isolated rabbit ventricular myocytes was monitored using a Leica SP5 confocal laser scanning system with a 60 × 1.4 NA oil-immersion objective in XT mode using Ca2+-sensitive indicators Fluo-3 (Molecular Probes, Carlsbad, CA, United States), respectively. Cells were loaded with Fluo-3 for 10 min, and after 20 min de-esterification, the dye was excited at 488 nm with an argon laser. Emission was collected at 500–600 nm. CMs were studied in Tyrode solution (see above). Myocytes were paced via field stimulation at 1 Hz using extracellular platinum electrodes. To assess the SR Ca2+ load and decay kinetics, 10 mM caffeine was applied at the end of the experiments.
For triggered activity, myocytes were paced at 1 Hz for 30 s, and the latency between the last stimulus in the pacing train and the first SCW was calculated. To assess the effect of mitochondria-derived ROS on CMs from aged rabbits, myocytes were pretreated with the mitochondria-specific ROS scavenger (2-(2,2,6,6-tetramethylpiperidin-1-oxyl-4-ylamino)-2-oxoethyl) triphenylphosphonium chloride (mito-TEMPO, 25 μM, Enzo Life Sciences, Farmingdale, NY, United States) for 10 min. The intracellular Ca2+ cycling measurements were performed under β-adrenergic stimulation with 100 nM ISO for HL-1 CMs and 30 nM ISO for aged rabbit CMs.
+ Open protocol
+ Expand
9

Oxidative Stress and Cell Viability Assays

Check if the same lab product or an alternative is used in the 5 most similar protocols
Glucose-high Dulbecco’s modified Eagle’s medium/F12 (DMEM/F12), glucose-free DMEM and fetal bovine serum (FBS) were purchased from Gibco (Grand Island, NY, USA); poly-L-lysine and H2O2 were from Sigma-Aldrich (Milan, Italy); 5,5′,6,6′-tetrachloro-1,1′,3,3′-tetraethylbenzimidazol-carbocyanine iodide (JC-1), Fluo-3, AM and Annexin V-FITC/propidium iodide (PI) were obtained from Molecular Probes, Invitrogen (Milan, Italy), and MTS was from Promega Corp. (Madison, WI, USA); Hank’s solution and trypsin were obtained from HyClone (Logan, UT, USA), and Hoechst 33342, phosphate-buffered saline (PBS) and penicillin/streptomycin (Pen/Strep) were from Beyotime (Shanghai, China). The lactate dehydrogenase (LDH) assay kit was purchased from Roche Molecular Biochemicals (Indianapolis, IN, USA).
+ Open protocol
+ Expand
10

Measuring Calcium Influx by Live-Cell Imaging

Check if the same lab product or an alternative is used in the 5 most similar protocols
Living-cell microscopy to detect depolarization-dependent calcium influx was performed as previously described29 (link). A confocal laser system (Zeiss LSM 880) and the fluorescent calcium indicator Fluo-3 (Molecular Probes) were used to measure the intracellular free calcium concentration. Cells were loaded with the Ca2+-sensitive fluorescence indicator Fluo-3/AM (3 μM; Biotium) at 37 °C for 60 min in a Ringer buffer containing (in mM) 120 NaCl, 2.5 KCl, 20.0 Hepes (pH 7.4), and 11.0 glucose, and depolarized with high-KCl (100 mM) in Ringer solution as previously described. Fluorescence was measured every 0.25 s for a total of 12 s.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!