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Andor ixon x3 du 897 em ccd camera

Manufactured by Oxford Instruments

The Andor iXon X3 DU 897 EM-CCD camera is a high-performance scientific imaging device. It features a back-illuminated, electron-multiplying CCD sensor with 512 x 512 pixels and a pixel size of 16 x 16 μm. The camera is designed for low-light imaging applications and provides high quantum efficiency and low noise performance.

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2 protocols using andor ixon x3 du 897 em ccd camera

1

Single-Molecule Fluorescence Imaging Techniques

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Cells were spotted on a 2% agarose pad made with 0.22 µm-filtered M2G. Imaging was performed at room temperature. All images were acquired on either an N-STORM microscope (Nikon) or a custom-built setup assembled on a commercial Axio Observer D1 microscope stand (Carl Zeiss). The N-STORM microscope was equipped with a CFI Apo TIRF 100 × oil immersion objective (NA 1.49), lasers emitting at 405 nm and 561 nm (Agilent Technologies, Santa Clara, CA) and a built-in Perfect Focus system. Raw single molecule data were taken in a field of view of ∼43 × 43 µm2 (256 × 256 pixels) with an Andor iXon X3 DU 897 EM-CCD camera (Andor Technology, South Windsor, CT) at a frame rate of 28.5–29 frames per second (fps). Under this acquisition condition, diffusing molecules appeared blurred and were rejected from our analysis. The custom-built microscope set up (Huang et al., 2013 (link)) was equipped with a 100 × /1.46-NA oil-immersion objective (alpha Plan-Apochromat 100 × /1.46 oil, Carl Zeiss), lasers emitting at 405 nm (50 mW, CrystaLaser, Reno, Nevada) and 568 nm (Innova 300, ∼400 mW, Coherent, Santa Barbara, CA). Fluorescence was recorded with an ORCA-Flash 4.0 sCMOS camera (Hamamatsu Photonics) at a frame rate of 100 fps and a field of view of 23 × 23 μm2.
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2

Single-Molecule Microscopy of Bacterial Cells

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For photoactivated localization microscopy and single-molecule (ribosome) tracking, cover slips and glass slides were washed in the following manner: sonication in 1 M KOH (15 min), sonication in milliQ H2O (15 min) and sonication in 70% ethanol (15 min) with 3–5 milliQ H2O rinses between wash solution changes. Cleaned glass slides and cover slips were then dried with pressured air. Cells were spotted on an agarose pad made with M9glyCAAT for E. coli or M2G for C. crescentus. Imaging was performed with an objective heat ring set at 30 °C. All images were acquired on an N-STORM microscope (Nikon) equipped with a CFI Apo TIRF 100× oil immersion objective (NA 1.49), lasers (Agilent Technologies) emitting at 405 nm (0–0.5%) and 561 nm (15–100%), and a built-in Perfect Focus system. Raw single-molecule data were taken at a frame rate of 100 to 5 frames per second in a field of view of 128 × 128 pixels with an Andor iXon X3 DU 897 EM-CCD camera (Andor Technology). Exposure time was kept constant at 10 ms for all experiments. Rifampicin treatment was performed by exposing cells to 200 μg/ml (E. coli) or 50 μg/ml (C. crescentus) rifampicin for 2 h in liquid culture before sampling and imaging.
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