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4 protocols using mouse igg1κ pe

1

Multicolor Flow Cytometry of Vascular Precursor Cells

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Adherent cells were harvested using Cell Dissociation Buffer (Invitrogen) or TrypLE (iPS cells) fixed in 4% paraformaldehyde (Tousimis), rinsed 2Χ with PBS, blocked using 0.5% donkey serum (Fitzgerald) and 1% bovine-serum albumin (Sigma) for 1 hour at room temperature (RT), and permeabilized (if needed) with 0.7% Tritron X-100 (MP Biomedicals) in PBS. For Stage 1, cells were stained with either 1:100 Alexa Fluor 647®-conjugated anti-Flk-1 antibody (Biolegend) or 1:50 Flk-1 rabbit polyclonal antibody (Santa Cruz Biotechnology) followed by 1:100 secondary donkey anti-rabbit FITC (Biolegend) or 1:75 anti-human CD309/VEGFR2 PE monoclonal (Biolegend) and BD Biosciences 1:1000 human Fc Block (1:1000) followed by 1:75 mouse IgG1, κ°PE (Biolegend) was used for the isotype control. For Flt-1 expression on mouse VPC, cells were stained with goat IgG anti-Flt-1 (Santa Cruz) or goat IgG (Abcam) for one hour followed by anti-goat FITC (Santa Cruz) at 1:200. Stage 2, cells were stained with CD144 (VE-cadherin) PerCP-efluor710® at 1:200. All cells were counterstained with 1:1000 eFluor 780 Fixable Viability Dye (eBioscience) and analyzed on an LSR II Flow Cytometer System (BD Biosciences).
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2

Multiparameter Flow Cytometry Panel

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The antibodies used for flow cytometry were: mouse IgG2b-FITC, goat IgG-PE, anti-Jagged1-FITC, anti-Dll3-PE (all from R&D System, Minneapolis, MN, USA), mouse IgG2a-PE, mouse IgG1κ-PE, mouse IgG1-Alexa Fluor 488, anti-Notch1-PE, anti-Notch2-PE, anti-Notch3-PE, anti-Notch4-PE, anti-Dll1-PE, anti-Dll4, (all from Biolegend, San Diego, CA, USA) (DAKO). For blast cell identification, we used anti-CD45-VioBlue, anti-CD45-APC-Vio770, anti-CD34-PerCP, and anti-CD117-APC (Miltenyi Biotec, Germany).
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3

Multiparametric Immune Profiling

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We used the following human fluorescent monoclonal antibodies markers: anti‐CD56‐FITC (Bio‐legend), anti‐CD161‐PE (Bio‐legend), anti‐CD56‐BV421 (Bio‐legend), anti‐CD86‐FITC (Bio‐legend), anti‐GranzymeB‐PE/Cyanine7 (Bio‐legend), anti‐perforin‐APC/Cy7(Bio‐legend), anti‐Ki67‐AlexaFluor™700 (Bio‐legend), anti‐FasL‐PerCP/Cy5.5 (Bio‐legend), anti‐HLA‐DR‐FITC (Bio‐legend), anti‐TNF‐α‐PE/Cyanine7 (Bio‐legend), and anti‐IFN‐γ‐APC/Cy7 (Bio‐legend). The isotype control antibodies used in our study were as follows: Mouse IgG 1κ‐FITC (Bio‐legend), Mouse IgG1κ‐PE (Bio‐legend), Mouse IgG2bκ‐BV421 (Bio‐legend), Mouse IgG1κ‐PE/Cyanine7 (Bio‐legend), Mouse IgG2ακ‐Alexa Fluor™700 (Bio‐legend), Mouse IgG1κ‐PerCP/Cy5.5 (Bio‐legend), and Mouse IgG2α κ‐APC/Cy7 (Bio‐legend).
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4

Multiparametric Analysis of Notch Signaling in Leukemia

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The antibodies used for FACS analysis were: mouse IgG2b-FITC, goat IgG-PE, anti-Jagged1-FITC, anti-Dll3-PE (all from R&D System, Minneapolis, MN), mouse IgG2a-PE, mouse IgG1κ-PE, mouse IgG1-Alexa Fluor 488,anti-Notch1-PE, anti-Notch2-PE, anti-Notch3-PE, anti-Notch4-PE, anti-Dll1-PE, anti-Dll4, anti-Bax-Alexa Fluor 488 (all from Biolegend, San Diego, CA) and rabbit anti-Bcl-2-FITC (DAKO). For leukemia cell identification we used anti-CD45-VioBlue, anti-CD45-APC-Vio770, anti-CD34-PerCP and anti-CD117-APC (all from MiltenyiBiotec, Germany). The antibodies employed for western blot analysis anti-Notch2, anti-Notch4 were from Santa Cruz (Biotechnology, Dallas, TX), anti-GAPDH and HRP conjugated secondary antibodies against mouse, rabbit or goat were from Sigma Aldrich. All the other antibodies used for Western blot were from Cell Signalling. Neutralizing antibodies,all used at a final concentration of 5 μg/ml, were: anti-Notch1, anti-Notch3,anti-Jagged1, anti-Jagged2, anti-Dll1 and anti-Dll4 (R&D Systems); anti-Notch-4 (Santa Cruz Biotechnology); anti-Dll3 (CST, Boston, MA). Recombinant human Jagged-1 and Jagged-2 were from R&D System. GSI-IX (DAPT) was purchased from Stemgent (Cambridge, MA) GSI-XII and SAHM1 were from Merck Millipore (Darmstadt, Germany). Cytarabine (Ara-C), Etoposide (Eto) and Idarubicin (Ida) were provided by Pharmacy Unit of the University Hospital of Verona.
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