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Padtrack cmv

Manufactured by Addgene
Sourced in United States

PAdTrack-CMV is a plasmid vector that contains a cytomegalovirus (CMV) promoter and a green fluorescent protein (GFP) reporter gene. This vector is commonly used for gene expression studies and to monitor transfection efficiency in mammalian cell lines.

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6 protocols using padtrack cmv

1

Adenoviral Overexpression and Knockdown of ESR1 and CREB in Human Muscle Stem Cells

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The overexpression and RNAi for human muscle stem/progenitor cells were performed by adenovirus infection. The cDNA of ESR1 or CREB were cloned into the Sal I-EcoRV site of adenoviral vector pAdTrack-CMV (Addgene, cat#16405) for overexpression experiments. The adeno-backbone plasmid pAdTrack-U6 expressing shRNA (GCATTCTACAGGCCAAATTCA) was constructed and used for ESR1 knockdown experiments. These vectors were first linearized by PmeI and then introduced into BJ5183-AD-1 cells. The recombinant adenoviral plasmids were transfected into 293 cells by Lipofectamine 2000 (Thermo Fisher Scientific, cat#11668019). The recombinant viruses were propagated in 293 cells and purified by CsCl gradient centrifugation for human muscle stem/progenitor cells infection. 1.2 × 106 unit/μL virus was applied to 3 × 105 human muscle stem/progenitor cells. These cells were subjected for various assays 48 h after infection.
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2

Adenoviral Vectors for HDV Packaging

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To generate adenoviral vectors carrying HDV packaging cassettes, PCR was used to amplify the head-to-tail dimeric HDV genomic DNA (HDV2G fragment) from the previously described pCD2G plasmid26 (link)27 (link) and the HBV surface protein-coding sequence (LS fragment) from the HBV48 plasmid28 (link). The HDV2G fragment was cloned into an adenoviral shuttle vector carrying an RFP-expressing cassette (pAd-RFP, Addgene #12520), and the LS fragment was inserted into a GFP-expressing adenoviral shuttle vector (pAdTrackCMV, Addgene #16405). The two fragments are both driven by the CMV promoter. The ligations of DNA fragments into the adenoviral shuttle vectors were performed using the “Gibson Assembly” method29 (link). The adenoviral plasmids (AdRFP-CMV-HDV2G and AdGFP-CMV-LS) were generated by homologous recombination between a PmeI-linearized shuttle vector and the supercoiled backbone vector in BJ5183 bacterial cells as previously described30 (link).
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3

Overexpression of Proteins in SH-SY5Y Cells

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SH-SY5Y cells were cultured and maintained in DMEM media containing 10% fetal bovine serum (FBS). For the overexpression of proteins, the cells were transiently transfected with DNA constructs using Lipofectamine 2000 reagent (11668-027, Invitrogen, Grand Island, NY) according to the manufacturer's protocol. 48 h post-transfection, the cells were harvested for western blot analyses. We chose to use pAdTrack-CMV (Addgene, Cambridge, MA) because it is a vector used for the expression of transgenes when a GFP tracer is desired.
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4

Generation of Recombinant Adenovirus Expressing scFvs

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ScFvs targeting the PEDV N protein were previously generated and described (36 (link)). Briefly, a porcine recombinant scFv library was constructed and four scFvs targeting the PEDV N protein were generated. ScFvs were amplified using upstream primers containing the restriction enzyme SalI (Thermo Fisher Scientific, Waltham, MA, USA) and downstream primers with HindIII (Table 1). PCR thermal cycling conditions were: 95°C for 5 min; 35 cycles of 95°C for 30 s, 62°C for 30 s, and 72°C for 55 s; and 72°C for 5 min. PCR products were purified and cloned into the shuttle vector pAdTrack-CMV (Addgene, Watertown, MA, USA). The linearized recombinant vector pAdTrack-CMV-scFv, digested with the restriction enzyme PmeI, was transformed into BJ5183 competent cells which contained the adenoviral backbone vector pAdEasy-1. Recombinant adenovirus plasmids in BJ5183 cells were selected using streptomycin and kanamycin, and termed pAdEasy-scFv (Addgene). After this, pAdEasy-scFvs were linearized with PacI and transfected into HEK293 cells using TurboFect Transfection Reagent (Thermo Fisher Scientific). Until fluorescence and cytopathic effects appeared, cells were freeze-thawed three times to generate the recombinant adenovirus rAdV-scFv. A recombinant rAdV-wild-type adenovirus was used as a control.
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5

Adenoviral Transduction of Cultured Islets

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Expression of exogenously introduced transgenes in cells of cultured islets was accomplished using adenoviral infection. The vector pAdTrack-CMV (Addgene) was used for subcloning into and for infection and expression of the catalytic subunit of Rab3GAP (Yoshimi Takai, Kobe University), EPI64A (Open Biosystems, Thermo Scientific) or β-Gal (control). The sequence fidelity of all constructs was confirmed by DNA sequencing (University of Michigan DNA Sequencing Core). Islets were infected with viral aliquots sufficient to infect approximately 20% of the surface layer of cells within a slice. Virus was diluted in media and applied directly onto the islets and into the small volume of media resident on the millicell membrane surface. After 12 hours the media was exchanged for fresh culture media. To identify infected cells the pAdTrack contained an independent CMV promoter driving expression of the fluorescent EGFP tracer.
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6

Constructing TRPC7 Overexpression and Knockdown Plasmids

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Mouse TRPC7 cDNA [16 (link)] was kindly provided by Professor Yasuo Mori (Kyoto University). For constructing TRPC7 overexpression plasmid Blue-pAdTrack-CMV-TRPC7, restriction endonuclease sites KpnI and NotI were added to 5′- and 3′- end of mTRPC7 cDNA, respectively, by PCR and the cDNA was ligated into the adenoviral shuttle plasmid Blue-pAdTrack-CMV which was modified from pAdTrack-CMV plasmid (Addgene plasmid # 16405). For constructing Tag-TRPC7 overexpression plasmid Blue-pAdTrack-CMV-TagTRPC7 KpnI site plus 3× Flag was added to the 5′- end, 3× hemagglutinin (HA) plus NotI site was added to the 3′- end of mTRPC7 cDNA, the cDNA was then ligated into Blue-pAdTrack-CMV. For constructing TRPC7 knockdown plasmids pAdTrack-U6-shRNA458 and pAdTrack-U6-shRNA459, two sequences of shRNA, shRNA-458 (targeting mouse TRPC7) and shRNA-459 (targeting rat TRPC7), adopted from Genetic Perturbation Platform were synthesized and ligated into the adenoviral shuttle plasmid pAdTrack-U6 at AgeI and XhoI restriction sites. pAdTrack-U6 was modified from pAdTrack plasmid (Addgene plasmid # 16404). The plasmid pAdTrack-U6-shRNAluc harboring shRNA targeting luciferase (shRNA-luc) was constructed as a negative control [31 (link)]. Targeting sequences of these shRNAs were shRNA-458: 5′-GCCGAATCAAACTCGCCATTA-3′, shRNA-459: 5′-GCCAACATTGAGACTGAATTT-3′, shRNA-luc: 5′-CCTAAGGTTAAGTCGCCCTCG-3′.
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