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7 protocols using horseradish peroxidase conjugated secondary antibody sc 2004

1

Quantifying Smad Signaling in MEPM Cells

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Total cellar protein extraction from different treated MEPM cells using 5 × sodium dodecyl sulfate-lysis buffer supplemented with protease inhibitors (M250; Amresco, Ohio). Protein concentration was determined using a standard BSA protein assay (DingGuo, Beijing, China). Then 40 μg of proteins were fractionated on 12% sodium dodecyl sulfate–polyacrylamide gel electrophoresis and transferred to nitrocellulose membranes. After blocking with 5% nonfat milk, the membranes were immunoblotted with the primary antibodies: Smad2 (ab71109; Abcam, Massachusetts), p-Smad2 (sc101801; Santa Cruz, California), Smad3 (BM3559; Boster Biotech, Wuhan, China), p-Smad3 (GD-CZ5616 R, Santa Cruz, California), Smad4 (PB0446; Boster Biotech, Wuhan, China), and Smad7 (sc-365846; Santa Cruz, California). -Actin was probed as a loading control. Then membranes were washed and incubated with horseradish peroxidase–conjugated secondary antibody (sc-2004 or sc-2005; Santa Cruz, California). Western blot analysis was performed using the Odyssey Infrared Imaging System (Li-Cor, Lincoln, Nebraska).
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2

Quantifying Bone-Related Protein Expression

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Protein expression of the target genes was examined by Western blot. Total protein in the cell lysates was determined using the BCA Protein Assay Kit (Thermo Fisher Scientific) as per the manufacturer's instructions. Equal amounts of protein were subjected to sodium dodecyl sulphate-polyacrylamide gel electrophoresis (SDS-PAGE). The proteins were transferred to nitrocellulose membranes and then incubated with anti-Runx2 (M-70, Santa Cruz Biotechnology Inc., Dallas, TX, USA; 1:500 dilution), anti-OC (FL-95, Santa Cruz; 1:500 dilution), anti-BSP (H-157, Santa Cruz; 1:500 dilution), or anti-β-actin (N-21, Santa Cruz; 1:500 dilution) antibody. The membranes were subsequently incubated with horseradish peroxidase-conjugated secondary antibody (Sc-2004, Santa Cruz; 1:40,000 dilution). Immunoreactive proteins were detected using a SuperSignal West Pico Chemiluminescent Substrate blotting kit (Thermo Fisher Scientific). Immunoreactive bands were visualized using chemiluminescence (Syngene GeneGnome, Synoptics Ltd., Cambridge, UK). The relative values of the protein bands were normalized to the internal control β-actin bands (n = 3, for each group).
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3

Investigating SLPI-mediated Cellular Pathways

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rhSLPI was purchased from Sino Biological, Inc. (Beijing, China). Medium 200 (M-200-500), Low Serum Growth Supplement kit (S003K-LSGS) and trypsin-EDTA were purchased from Thermo Fisher Scientific, Inc. (Gibco; Waltham, MA, USA). The LDH liquid-UV assay kit was obtained from Human (Wiesbaden, Germany), and MTT was purchased from Ameresco, Inc. (Solon, OH, USA). Antibodies against total p38 (sc-728), phosphorylated-p38 (sc-17852-R), total Akt (sc-8312), phosphorylated-Akt (sc-293125), Bax (sc-6236), Bcl-2 (sc-783), and cleaved caspase 3 (sc-56053), β-actin (sc-130301), and the horseradish peroxidase-conjugated secondary antibody (sc-2004) were purchased from Santa Cruz Biotechnology, Inc. (Dallas, TX, USA). Other chemicals were purchased from Sigma-Aldrich (Merck KGaA, Darmstadt, Germany).
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4

Quantification of HIF-1α by Western Blot

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Following 24-hours of culture, cells were lysed in Sodium Dodecyl Sulfate (SDS) buffer and protein was quantified using a Bicinchoninic Acid assay (Thermo Fisher Scientific). Lysates were run on polyacrylmide gels (Biorad) and transferred using the Trans-Blot Turbo Transfer System (Biorad). HIF-1α and housekeeping protein β-Actin were bound by primary antibodies (h-206; Santa Cruz and ab8227; Abcam). Signal detection produced between a horseradish peroxidase-conjugated secondary antibody (sc-2004; Santa Cruz) and the Chemiluminescent ECL substrate (Biorad) were detected on a Chemidoc Touch imaging platform (Biorad). HIF-1α and protein levels were generated by densitometric analysis with ImageJ and normalised to that of β-Actin.
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5

Protein Expression Analysis with Western Blot

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Proteins were extracted from cells and tissues, and the concentration was quantified by BCA kits. Typical SDS (10%)-polyacrylamide gels was utilized to purify the proteins (∼30 μg) extracted from every group. Afterward, the purified proteins were transferred to a polyvinylidene difluoride (PVDF) membrane. Placed the membrane into a Petri dish containing 5% milk for 1 h to block non-specific sites. Discarded the milk and rinse the membranes and dish three times with PBS, then added the PBS containing primary antibodies into the dish. After overnight incubation, rinse the membrane and dish again three times with PBS, then added horseradish peroxidase-conjugated secondary antibody (sc 2004, Santa Cruz Biotechnology) and incubated for 1 h. The antibody-reactive bands were detected with ECL reagent (Millipore, Billerica, MA, USA). GAPDH (ab8245, Abcam) regarded as a control. Primary antibodies showed as below: anti-FOXQ1 (MA5-17078, ThermoFisher), anti-Twist1 (ab50887, Abcam), anti-E-cadherin (ab76319, Abcam), anti-N-cadherin (ab76011, Abcam), anti-Vimentin (ab92547, Abcam), and anti-USP21 (17856-1-AP, ThermoFisher).
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6

Western Blot Analysis of Protein Expression

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Proteins were isolated and the concentration was quantified. Subsequently, an equivalent quantity of proteins underwent purification using 10% SDS-polyacrylamide gels and was then transferred to a polyvinylidene difluoride (PVDF) membrane. To prevent non-specific binding, the membrane was subjected to a 1 h incubation with 5% skim milk. The next step involved an overnight incubation at 4 °C with primary antibodies, followed by treatment for 1 h with horseradish peroxidase-conjugated secondary antibody (sc-2004, Santa Cruz Biotechnology). The antibody-reactive bands were detected with ECL reagent (Millipore, Billerica, MA, USA). β-actin (ab8226, Abcam) was used as an internal control. The following primary antibodies were used: anti-proliferating cell nuclear antigen (PCNA; ab92552, Abcam), anti-Bax (ab32503, Abcam), anti-Bcl-2 (ab182858, Abcam), anti-IL6R (ab271042, Abcam), anti-YTHDF2 (ab220163, Abcam), and anti-FOXO3 (ab23683, Abcam).
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7

Quantifying HIF-1α Expression

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Following 24‐hours of culture, cells were lysed in sodium dodecyl sulfate (SDS) buffer and protein was quantified using a Bicinchoninic Acid assay (Thermo Fisher Scientific). Lysates were run on polyacrylmide gels (Biorad, UK) and transferred using the Trans‐Blot Turbo Transfer System (Biorad). HIF1α and housekeeping protein β‐Actin were bound by primary antibodies (H‐206; Santa Cruz Biotechnology and ab8227; Abcam, UK). Signal detection produced between a horseradish peroxidase‐conjugated secondary antibody (sc‐2004; Santa Cruz) and the Chemiluminescent ECL substrate (Biorad) were detected on a Chemidoc Touch imaging platform (Biorad). HIF1α and protein levels were generated by densitometric analysis with ImageJ and normalized to that of β‐Actin.
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