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3 protocols using trimethoprim

1

Conjugation Experiments with E. coli

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Conjugation experiments were carried out with E. coli NalR as the recipient. The recipients were selected on Luria-Bertani (LB) medium containing streptomycin (25μg/ml), nalidixic acid (50μg/ml), trimethoprim (5μg/ml) and ampicillin (100μg/ml) and the donors were selected on LB containing only streptomycin and trimethoprim (BioMérieux, France). A total of 5 ml of fresh LB broth was inoculated with either recipient or donor bacteria and incubated for 24 h at 37°C. After overnight incubation, cultures were diluted at 1:50 (400μl in 20ml of LBB) and incubated at 37°C with strong agitation for 4 hours until they reached the logarithmic growth phase (OD 600nm = 0.6–0.8). Donor and recipient strains were then mixed at the following ratios 1:1; 1:2; 1:10 and incubated at 37°C for 3 hours. Transconjugants were selected on LB agar plates supplemented with streptomycin (25μg/ml), nalidixic acid (50μg/ml), trimethoprim (5μg/ml) and ampicillin (100μg/ml). PCR was performed on transconjugants to determine whether resistance genes had been transferred.
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2

Antimicrobial Susceptibility Profiling

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MICs were determined by the Etest method according to the manufacturer’s instructions. Antimicrobial agents included aztreonam, ceftazidime, ciprofloxacin, colistin, gentamicin, imipenem, nalidixic acid, tetracycline, tigecycline, tobramycin, and trimethoprim (bioMe’rieux, Marcy-l’_Etoile, France). E. coli ATCC 25922 and Pseudomonas aeruginosa ATCC 27853 were used as quality control strains. Interpretation of antimicrobial susceptibility was based on guidelines of the Clinical Laboratory Standards Institute (CLSI) [49 ].
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3

Characterization and Antibiotic Sensitivity of Bacterial Strains

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Oxi/Ferm Pluri Test® (Liofilchem, Italy) was used. The automatic characterization was then carried out using the VITEK®-2 GN identification cards (bioMérieux, Marcy-l’Étoile, France). The motility of the bacterium was tested in Motility Test Agar (Liofilchem, Italy). Antimicrobial sensitivity was determined using E-test in Müller Hinton agar (Pronadisa® Madrid, Spain) using different antibiotics for each strain. For SAICEU11T strain we used cefepime and sulfamethoxazole and trimethoprim (bioMérieux, Marcy-l’Étoile, France); amoxicillin, amoxicillin-clavulanic acid, cefotaxime, cefpirome ciprofloxacin and nalidixic acid (Liofilchem, Italy). For SAICEU22T strain we used piperacillin and piperacillin with tazobactam, cefepime (bioMérieux, Marcy-l’Étoile, France); ceftazidime, imipenem, imipenem with EDTA, amikacin, gentamicin, and ciprofloxacin (Liofilchem, Italy).
Mercury MBC was performed in Müller Hinton agar (Pronadisa®, Madrid, Spain), supplemented with different concentrations of HgCl2: 400, 350, 200, 175, 150, 100, 87.5, 75, 50, 43.75, and 25 μg mL−1. MBC was determined as the lowest concentration of HgCl2 capable of inhibiting > 99.9% of bacterial growth.
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