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2 protocols using anti prdx4

1

Celastrol Proteomic Profiling Protocol

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Celastrol (purity ≥98%) was purchased from Bethealth People Biomedical Technology (Beijing, China). Cell Counting Kit-8 (CCK-8) was purchased from Dojindo (Japan). N-Acetyl-l-cysteine and deferoxamine mesylate were obtained from AbMole BioScience (USA). Click chemistry reaction and LC–MS/MS reagents include: TAMRA-azide, Biotin-azide and THPTA (ClickChemistryTools, USA); NaVc and CuSO4 (Sigma–Aldrich, USA); high capacity neutravidin agarose beads, TEAB and sequencing grade modified trypsin (Thermo, USA); Oasis HLB Extraction Cartridge (Waters, USA); Pierce™ Quantitative Fluorometric Peptide Assay Kit (Thermo, USA).
Specific primary antibodies anti-PRDX1, anti-PRDX2, anti-PRDX3, anti-PRDX4, anti-PRDX5, anti-PRDX6, anti-HO-1 (Abcam, UK), anti-Vimentin, anti-PPARγ, anti-COL1Al (Proteintech, China) and anti-β-actin (Affinity Biosciences, China) were used.
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2

Comprehensive Protein Extraction and Analysis

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For in vitro experiments, total protein isolation was performed using the RIPA lysis buffer according to the standard techniques. The mitochondria were removed, and the cytoplasmic protein was extracted using the Cell Mitochondria Isolation Kit (Beyotime) according to the manufacturer’s instruction. For in vivo experiments, the xenograft tissue was flash-frozen in liquid nitrogen and carefully ground, and then the tissue was lysed in RIPA lysis buffer.
Western blot analysis was performed as previously described.15 (link) The following primary antibodies were used: anti-IDH2 (1:1000; Proteintech, Chicago, IL, USA), anti-IDH1 antibody (1:1000; Proteintech), anti-GAPDH (1:4000; Proteintech), anti-PRDX1 (1:10000; Abcam, Cambridge, UK), anti-PRDX2 (1:1000; Abcam), anti-PRDX3 (1:10000; Abcam, anti-PRDX4 (1:10,000; Abcam), anti-PRDX5 (1:1000; Abcam), anti-TXN (1:500; Abcam), anti-TXN2 (1:10,000; Abcam), anti-SOD2 (1:1000; Abcam), anti-DRP1 (1:1000; Abcam), anti-OPA1 (1:1000; Abcam), anti-Phospho-AKT (pAKT) (T308) [1:1000; Cell Signaling Technology (CST), Danvers, MA, USA], anti-Bax (1:1000; CST), anti-Bcl-2 (1:1000; CST), anti-cytochrome c (1:1000; CST), anti-cleaved caspase-3 (1:1000; CST), and β-actin (1:2000; Proteintech).
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