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33 protocols using α sma

1

Immunohistochemical and Immunofluorescence Analysis of Tumor Tissues

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The 4 mm paraffin-embedded tissue sections were subjected to immunohistochemical staining (IHC). IHC staining of subcutaneous graft tumors and human tissues was performed by a reputable commercial entity (Servicebio, China). For immunofluorescence, two formalin-fixed paraffin-embedded (FFPE) tissue blocks (FIGO I and FIGO III tumors) were selected from Zhongda Hospital, Southeast University. Immunofluorescence staining was also conducted by the aforementioned commercial entity. The antibodies used in the immunofluorescence panels included Vimentin (Servicebio, GB121308), FOXP3 (Servicebio, GB112325) and α-SMA (Servicebio, GB13044). Lastly, DAPI was utilized as a counterstain for nuclear labeling. Detailed methods can be found in a previously published work by the same company [3 (link), 16 (link)]. Stained slides underwent analysis using a NanoZoomer S360 slide scanner (Hamamatsu Photonics, France). For tumor area assessment, the IHC staining were quantified using Quant Center software. Staining intensities were classified into weak, moderate, or strong categories. The proportion of cells within each intensity category was calculated, and the IHC score was derived using the formula: IHC score = (percentage of weakly stained cells × 1) + (percentage of moderately stained cells × 2) + (percentage of strongly stained cells × 3).
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2

Immunofluorescence Analysis of Epithelial-Mesenchymal Transition

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HPMCs were seeded in 24-well dishes and treated with different interventions including HG and siRNA. Then cells were fixed with 4% Paraformaldehyde for 20 min, permeabilized in 0.2% Triton X-100 for 15 min, blocked with 5% BSA for 1 h at 37°C and incubated overnight at 4°C with primary antibodies, E-cadherin (Cell signaling technology, 3195T, 1:200) and α-SMA (Servicebio, GB111364, 1:200). Finally, the cells were incubated with the Alexa Fluor 488-conjugated secondary antibody (Invitrogen, CA, United States, 1:200) at 37°C for 1 h. After staining nuclei with DAPI (Beyotime Biotechnology), images were captured by fluorescence microscope (Leica, Germany).
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3

Immunofluorescence Staining of Heart Tissue

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The heart tissues slices were also used for immunofluorescence staining. To prepare the slices, the heart sections were dewaxed and dehydrated, followed by antigen retrieval in boiling EDTA antigen retrieval buffer. Subsequently, the slides were incubated overnight at 4 °C with primary antibodies (α-SMA, Servicebio, Cat. #GB111364; p53, Santa Cruz, c-126; γ-H2AX, Abcam, Cat# ab81299). Afterward, the slides were washed three times with PBS and incubated with secondary antibodies (FITC, EarthOx, Cat. #E031210; Cy3, EarthOx, Cat. #E031610) for 2 h at room temperature. Negative controls were included without the use of primary antibodies. The nuclei were counterstained with DAPI. Imaging was performed using a laser-scanning confocal fluorescence microscope (Nikon, Tokyo, Japan). Four random microscopic fields were selected from each slide to calculate the relative fluorescence intensity, and an average value was determined for each rat.
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4

Immunohistochemical Analysis of Lung Tissue

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Paraffin sections of lung tissue were dewaxed and hydrated before undergoing antigen retrieval. Endogenous tissue peroxidases were eliminated by incubating the sections in 3% H2O2 for 25 min. The sections were then blocked with 10% goat serum for 30 min, followed by incubation with primary antibodies (α-SMA, #GB111364, 1:2000, Servicebio) at 4 °C overnight. The sections were then incubated with secondary antibodies (#GB23303, 1:200, Servicebio) for 1 h at room temperature and counterstained with hematoxylin. These sections were examined using an A1 light microscope (Zeiss, Jena, Germany), and three randomly selected fields of view (×20 magnification) were captured for each section. The thickness of the smooth muscle cell ring was calculated using Image-J software (National Institutes of Health 1.8.0_112).
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5

Protein Expression Profiling in Cultured Cells

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Total proteins were isolated from cultured cells by using a lysis buffer. Then equal amounts of protein lysates were separated by SDS-page gel electrophoresis. After transferring onto a PVDF membrane, protein was incubated with primary antibodies against Fgf21, Sirt1, Troponin I, t-CamKII, Calpian 1, NOX2, NOX4, GAPDH (Abcam), Nrf2, MHC, SOD2, UCP3, p-RyR2, β-Klotho (Abclonal), ox-CamKII (GeneTex), RyR2, FgfR1 (Proteintech), L-type calcium channel α1C-subunit (LCC) (Affinity), α-SMA, Collagen-1A1, CTGF, and Tubulin (Servicebio). Then they were incubated with a secondary antibody conjugated to HRP (1:5,000) for 1 h. Signals of proteins were identified by chemiluminescence and quantified by densitometry.
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6

Western Blot Analysis of Protein Expression

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Total proteins were extracted from lung tissues, primary fibroblasts, and Mlg cells using cold RIPA buffer containing protease and phosphatase inhibitor cocktail (Proteintech, Wuhan, China). The proteins were then separated with 10% SDS-PAGE and transferred to PVDF membranes (Millipore, Bedford, MA, USA). The membranes were blocked in 5% (w/v) non-fat skimmed milk/TBST for 1.5 h. Primary antibodies against α-SMA (1:500, Servicebio), Fibronectin (1:1000, Cell Signaling Technology, Danvers, MA, USA), Collagen-1 (1:1000, Cell Signaling Technology), Grp78 (1:1000, Cell Signaling Technology), CHOP (1:1000, Cell Signaling Technology), p-STAT3 (1:500, Affinity), p-JAK1 (1:1000, Cell Signaling Technology), STAT3 (1:1000, Proteintech), JAK1 (1:1000, Proteintech), VDR (1:1000, Proteintech), β-actin (1:3000, Sigma, St. Louis, MO, USA) and ATF6 (1:500, Affinity, Changzhou, China) were incubated with the membranes overnight at 4 °C. After washing three times with TBST buffer, the membranes were incubated in horseradish peroxidase-labeled secondary antibodies (1:1000, Proteintech) for 1 h at room temperature. The Western blots were subsequently detected using enhanced chemiluminescence (Biosharp, Hefei, China), and the chemiluminescent signals were quantified using Tanon Chemilumenescence Instrument (Tanon, Shanghai, China). The images were analyzed using Fiji software.
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7

Western Blot Analysis of Myocardial Proteins

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Myocardial tissue and cell suspension was lysed by RIPA lysis buffer (MB-030-0050, Multi Sciences Biotech, Hangzhou, China). BCA Protein Assay Kit (23225, Thermo Fisher, USA) was adopted to determine protein concentrations. After equal quantities, total proteins were separated in SDS-PAGE gel (4-20%, ACE Biotechnology, Xiangtan, China), and the bands were transferred onto PVDF membranes (03010040001, Merck, USA). After blocked with 5% skimmed milk and washed with tris-buffered saline containing 0.1% tween-20 (TBST), protein bands were blotted with primary antibodies at 4° C overnight. After washing with TBST, protein bands were blotted with HRP conjugated secondary antibody and monitored using ECL buffer (32209, Thermo Fisher). Quantifications of western blotting were measured with Fusioncapt advance software. Antibody information: Bax (HUABIO, USA, ET1603-34, 1:1000), Bcl2 (HUABIO, ET1702-53, 1:1000), Cleaved-caspase3 (HUABIO, ET1608-64, 1:1000), IL-10 (Servicebio, Wuhan, China, GB11108, 1:1000), TLR4 (Servicebio, GB11519, 1:1000), α-SMA (Servicebio, GB111364, 1:1000), MMP-9 (Abcam, Cambridge, UK, ab76003, 1:1000), Collagen I (Abcam, ab34710, 1:1000), GAPDH (CST, USA, 5174S, 1:1000). HRP-conjugated secondary antibody (HUABIO, HA1001, and HUABIO, HA1006, 1:50000).
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8

Liver Immunohistochemical Analysis

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Immunohistochemical analysis was carried out on 5-μm-thick deparaffinized liver sections incubated overnight at 4 °C with polyclonal antibodies for TGF-β1 (Fine Test, China), CK19 (Zeta Corporation, USA), α-SMA, and vascular endothelial growth factor (VEGF) (Servicebio, China). Sections were treated with secondary antibodies conjugated with horseradish peroxidase and visualized by 2% diaminobenzidine reagent. Then, slides were counterstained with hematoxylin and examined by a light microscope.
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9

Myocardial Infarction and Sympathetic Nervous System

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All rats were sacrificed 30 days after MI, and tissues including the heart, SCG, and brain were dissected quickly and then fixed with 4% paraformaldehyde in preparation for histological staining. To determine the ischemic injury, Masson staining (Servicebio, Wuhan, China) was performed in heart sections. Evaluating the expression of α-SMA (Servicebio, Wuhan, China) can reveal the degree of cardiac fibrosis. Tyrosine hydroxylase (TH, Abcam, Cambridge, Massachusetts) and synaptophysin (SYN, Life Technologies, Grand Island, New York) were used to assess the sympathetic activity (20 (link)). To identify the virus-EGFP positive cells in the SCG, TH expression was detected by immunohistochemical staining. The immunofluorescence of c-Fos (Servicebio, Wuhan, China) was used to evaluate the neuronal activity (21 (link)). The fluorescent dye DAPI (4′,6-diamidino-2-phenylindole) was used to locate the position of the nucleus. All analyses were quantitatively carried out with commercially available software (Image Pro Plus, Media Cybernetics, Inc., Rockville, MD).
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10

In Vivo Compatibility of Auricle Scaffolds

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Similar to previous animal experiments, SD rats (n ​= ​6) were divided into two groups, which were used for the in vivo compatibility study of auricle-shaped scaffolds. HDPE (auricle) and pDA-EFE (auricle) were subcutaneously implanted between the skin and fascia on the backs of the rats. After 28 days, skin biopsies, including the scaffolds, were divided into two parts for histological and immunohistochemical analyses. Tissues were fixed, dehydrated, embedded in paraffin, sectioned, and stained with H&E, CD68, Sirius red, CD31(Servicebio, China), α-SMA (Servicebio, China), and DAPI to evaluate histocompatibility and vascularization.
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