The largest database of trusted experimental protocols

Leupeptin

Manufactured by Thermo Fisher Scientific
Sourced in United States, United Kingdom

Leupeptin is a protease inhibitor commonly used in laboratory research. It functions by inhibiting the activity of certain proteases, which are enzymes that break down proteins. Leupeptin is often utilized in experiments to prevent protein degradation and maintain the integrity of protein samples.

Automatically generated - may contain errors

40 protocols using leupeptin

1

Brain Tissue Isolation and Protein Extraction

Check if the same lab product or an alternative is used in the 5 most similar protocols
The 6-month old female mice (C57BL/6) were purchased from Jackson Laboratory (Mouse 1–7). The 18-month old female mice (C57BL/6) (Mouse 8–16) were obtained from the NIH National Institute on Aging (NIA) ageing mouse colony. Mice were euthanized by cervical dislocation, and the brains used for these studies were harvested immediately and kept at −20°C until tissue cell lysates were prepared.
Immediately prior to lysis, organs were cut into small pieces with a straight razor and combined with 400 µL of 20mM phosphate buffer (pH 7.4) and 4 µL of 100X protease inhibitor cocktail in Lysing Matrix A tubes (MP Biomedicals, LLC Solon, OH). The 100X protease inhibitor cocktail included pepstatin A (0.2 mM), leupeptin (0.4 mM), E-64 (0.3 nM), bestatin (1 mM), and AEBSF (20 mM) protease (all from ThermoFisher Scientific, Waltham, MA). The resulting mixture was added to a MP Fast-Prep-24 Tissue Homogenizer in which the sample was homogenized for 20 seconds at 4m/s, put on ice for 5 minutes, and homogenized again for 20 seconds at 4m/s. The homogenized sample was centrifuged for 90 minutes at 4°C and 14,000 rcf. The supernatant was removed and kept at −20°C until it was subject to an iTRAQ-SPROX analysis as described below.
+ Open protocol
+ Expand
2

Inducible H4 Neuroglioma Cell Model for Alpha-Synuclein

Check if the same lab product or an alternative is used in the 5 most similar protocols
Inducible human H4 neuroglioma cells expressing WT SNCA under the control of a tetracycline inducible promoter (tet-off) have been previously described [57 (link)]. Cells were maintained in Optimem medium (Thermo Fisher Scientific, 31985070) containing 5% FCS (tet-free; PAN-Biotech, P30-3602), 200 µg/ml geneticin (Thermo Fisher Scientific, 10131035) and hygromycin (Thermo Fisher Scientific, 10687010), 1% Pen/Strep. If not indicated differently, SNCA expression was turned off by the addition of 2 µg/mL doxycycline (Dox; Sigma, D3447) for 72 h. H4 cells were seeded into 6-well plates for western blot at 2 × 105 or 1.2 × 105 (on 12 mm cover glasses) per well for immunostaining. On the following day, 20 µg/mL of rHsCTSD was added to the media. Cells were then incubated for 24, 48 and 72 h before harvesting. The cellular uptake of rHsCTSD and its effects on SNCA were then evaluated by western blot and immunostaining. To test for potential cytotoxicity, rHsCTSD of different concentration (20, 40, 60, 80, 100 µg/mL) were given to cells for 72 h and cell death was measured by LDH (lactate dehydrogenase) assay, ToxiLight assay (LONZA, LT27-066) and cleaved CASP3. Leupeptin (LeuP; Thermo Fisher Scientific, 78435) was given to the cells to inhibit cysteine-cathepsins (e.g., CTSB and CTSL) and was used at 5 µM for 72 h.
+ Open protocol
+ Expand
3

Apoptosis Mechanisms in Cancer Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
In order to investigate the mechanisms of interaction with the apoptotic pathway in cancer cells, the cells were plated in six-well plates at a density of 1×106 cells/wells and then incubated for 48 h. The cells were treated with various concentrations of 7-MH at 30 min, and cell death was induced with H2O2 at 15 min for SH-SY5Y cells. In HepG2, HT29, 4T1, and LNCaP cells, the cells were treated with various concentrations of 7-MH at the indicated time. Whole-cell lysates were prepared with lysis buffer [25 mM HEPES, pH 7.7, 0.3 mM MgCl2, 0.2 mM EDTA, 10% Triton X-100, 20 mM β-glycerophosphate, 1 mM sodium orthovanadate, 1 mM phenylmethylsulfonyl fluoride (PMSF), 1 mM dithiothreitol (DTT), 10 µg/ml aprotinin, and 10 µg/ml leupeptin] (Gibco; Thermo Fisher Scientific, Inc.). The cell lysates were collected from the supernatant after centrifugation at 2,500 × g for 10 min 4°C.
+ Open protocol
+ Expand
4

Protein Expression and Purification

Check if the same lab product or an alternative is used in the 5 most similar protocols
Reagents used for protein expression and purification include: 4-(2-aminoethyl)benzenesulfonyl fluoride (AEBSF, Fisher BioReagents 30827-99-7), phenylmethylsulfonyl fluoride (PMSF, Sigma-Aldrich P7626), Tosyl-L-lysyl-chloromethane hydrochloride (TLCK, Sigma-Aldrich T7254), leupeptin (Thermo Scientific 78435), benzamidine (Sigma-Aldrich B6506), FLAG affinity resin (Sigma-Aldrich A2220), FLAG peptide (Sigma-Aldrich, F3290) and HIS-Select resin (Sigma-Aldrich P6611), and biotin (Sigma-Aldrich B4639).
+ Open protocol
+ Expand
5

Protease Activity Detection Assay

Check if the same lab product or an alternative is used in the 5 most similar protocols
We used either commercially available protease inhibitor peptides or growth of bacterial strains on the protease detection plates. Protease inhibitors were α-2-macroglobulin (7.8 mg/ml in sterile water; Thermo Fisher), aprotinin (0.3 mM in sterile dH20; Thermo Fisher), leupeptin (10 mM in sterile dH20; Thermo Fisher), and bestatin (1 mM in methanol; Thermo Fisher) that were pipeted as 2.0 μl drops onto the surface of the protein containing plates and allowed to be absorbed into the plate and diffuse for 1 hour. The bacterial strains Photorabdus (Xenorhabdus) luminescens strain Hm primary and secondary forms, Escherichia coli B, Citrobacter freundii, Staphylococcus aureus, S. epidermidis and Enterococcus faecalis were allowed to grow two days at 30°C. Following incubation, the bacterial strains were washed off the plate using a gentle stream of water in order to remove the colonies and eliminate their potential for surface inhibition effects on diffusion of the protease and/or dyes.
+ Open protocol
+ Expand
6

Determination of HATL5 and Matriptase Inhibition

Check if the same lab product or an alternative is used in the 5 most similar protocols
The assays were performed in 96-well plates in a total reaction volume of 100 µL using 50 mM Tris-HCl pH 8.0, 150 mM NaCl, 0.01% Tween-20, 0.01% BSA for dilution of all samples. 5 nM purified active recombinant HATL5 or matriptase serine protease domain was incubated at 37°C for 60 min with 100 µm of the synthetic peptide L-1720 Suc-Ala-Ala-Pro-Arg-pNA (Bachem, Bubendorf, Switzerland) in the absence or presence (inhibitor and substrate added concomitantly) of HAI-1 (60 nM) (R&D, Minneapolis, MN), HAI-2 (40 nM) (R&D, Minneapolis, MN), aprotinin (2 µm), leupeptin (20 µm), benzamidine (2 mM), or serpinA1 (60 nM) (all from Thermo Scientific, Waltham, MA). Changes in absorbance at 405 nm were monitored using a Magellan NanoQuant Infinite M200 Pro plate reader (Tecan US, Inc., Morrisville, NC).
+ Open protocol
+ Expand
7

Cell Protein Extraction and Western Blot

Check if the same lab product or an alternative is used in the 5 most similar protocols
Attached and ECM-detached cells were washed once with ice-cold PBS and lysed in RIPA buffer (50 mM Tris (pH 8.0), 150 mM NaCl, 1% Nonidet P-40, 0.5% Sodium deoxycholate, 0.1% SDS) supplemented with 1 mg mL−1 aprotinin, 5 mg mL−1 leupeptin, 20 mg mL−1 phenylmethylsulfonyl fluoride (PMSF) and HALT phosphatase inhibitor mixture (Thermo Fisher Scientific). Lysates were collected after centrifugation for 15 min at 4°C at 14,000 r.p.m. and normalized by BCA assay (Pierce Biotechnology). Normalized lysates underwent SDS-PAGE and transfer/blotting were carried out as described previously.63 (link) The following primary antibodies were used for western blotting: β-actin (Sigma-Aldrich; A1978) (1:10000), Vinculin (Proteintech; 66305-1-Ig) (1:3000), mouse Irg1/Acod1 (Cell Signaling Technology (CST); 17805) (1:1000), human IRG1/ACOD1 (CST; 77510) (1:1000), Tim23 (BD Biosciences; 611222 (1:2000), Tom20 (CST; 42406) (1:1000), Sdhb (Proteintech; 10620-1-AP) (1:10000). Secondary antibodies used were Alexa Fluor Plus 680 and 800 (Thermo Fisher Scientific; A32788, A32808) (1:10000) against mouse and rabbit, respectively, and bands were visualized with the LiCor Odyssey CLx (Licor).
+ Open protocol
+ Expand
8

Western Blot Analysis of Sperm Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
Percoll‐washed sperm cells were sonicated and sperm heads and tails were isolated as described previously.
23 (link) Whole sperm cells, sperm heads and tails were lysed in radio immune preciptation assay buffer (Thermo Scientific) with freshly added protease inhibitors: aprotinin, leupeptin, pepstatin, and PMSF (Thermo Scientific) on ice for 30 min followed by a 15 min spin at 14,000 x g, 4°C. Sperm lysates or CRISP2 precipitates were denatured in 4x sodium dodecyl sulfate (SDS) sample buffer (200 mM Tris‐HCl, pH 6.8, 10% β‐mercapto‐ethanol, 8% SDS, 0.08% bromophenol blue, 40% glycerol) and boiled for 10 min. Samples were loaded onto SDS‐PAGE gels (5% stacking gel, 12% resolving gel) and were blotted onto 0.2 µm nitrocellulose membranes (GE Healthcare) at 100 V for 1 h. After blocking for 3 h at RT in 5% (w/v) BSA in PBS with 0.05% (v/v) Tween‐20 (PBST), membranes were incubated with primary antibodies (Supplementary Table S1) overnight at 4°C. After three washes in PBST for 15 min, membranes were incubated with horse radish peroxidase conjugated secondary antibodies (Table S1) for 1 h at RT. After rinsing four times in PBST for 20 min, membranes were developed using chemiluminescence (enzyme chemilumenescence [ECL]‐detection kit; Supersignal West Pico, Pierce). Migration levels of proteins were visualized using a pre‐stained protein ladder, 10 to 250 kDa (Thermo Scientific).
+ Open protocol
+ Expand
9

Mycelia Protein Extraction Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
Mycelia from GMM agar plates were collected and stored at −80°C prior to protein extraction. For protein extraction, the lysis buffer consisted of 100 mM triethylammonium bicarbonate (TEAB) with 1× Halt protease inhibitor cocktail (100×), with the final concentration of each component being 1 mM AEBSF [4-(2-aminoethyl)benzenesulfonyl fluoride hydrochloride], 800 nM aprotinin, 50 μM bestatin, 15 μM E64, 20 μM leupeptin, and 10 μM pepstatin A (Thermo Scientific, Rockford, IL) and 200 µg/ml phenylmethylsulfonyl fluoride (Sigma-Aldrich, St. Louis, MO). Mycelia were homogenized directly using Precellys 24 homogenizer (Bertin, Rockville, MD) in which each sample was processed inside a 2-ml cryotube with 0.5-mm glass beads three times (at 4°C and 6,500 rpm for 1 min., repeated 3 times with 15-s pauses in between). The lysed fungi were centrifuged at 17,000 × g for 15 min. Protein concentrations in the supernatants were measured by the Bradford assay with albumin for the standard curve (Bio-Rad Laboratories, Inc., Hercules, CA).
+ Open protocol
+ Expand
10

Cell Lysis and Protein Extraction

Check if the same lab product or an alternative is used in the 5 most similar protocols
Reporter-cells were washed briefly with ice-cold DPBS and lysed with 50 µl of lysis buffer per well (50 mM Tris/HCl pH 7.5, 150 mM NaCl, 2 mM EDTA, 0.5% IgePAL, 0.5% Sodium deoxycholate and freshly added 250 µM PMSF, 10 ng Leupeptin, 10 ng Aprotinin, 1 ng Pepstatin A, 10 ng DNase und 1 µl Halt Protease Inhibitor Cocktail; Thermo Fisher Scientific). Cell lysates were collected into a pre-cooled tube and were centrifuged for at least 1 h at ~15,000 × g at 4 °C. The supernatant was collected into two tubes, snap-frozen with liquid nitrogen and stored at −80 °C until needed.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!