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21 protocols using tyrosine hydroxylase

1

Immunohistochemistry Protocol for Retina Analysis

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The protocol for immunohistochemistry as previously described.47 The retinas were incubated in PBS with 1% Triton X-100 and 0.5% Tween 20 for 1 h at room temperature and in 4% BSA for 1 h at room temperature and then incubated overnight at 4°C with primary antibodies: RBPMS (1:500, Abcam), ChAT (1:100, Abcam), VGlut2 (1:100, Frontier Institute), syntaxin (1:100, Abcam), tyrosine hydroxylase (1:100, Abcam) and Prox1 (1:100, AngioBio) in blocking buffer. Secondary anti-rabbit, mouse, and goat IgG, conjugated with Alexa TM488, TM594, and 633, respectively (1:1,000; Molecular Probes), were applied for 1 h at room temperature. The retinas then were flat mounted, and the sections were mounted on slide glass. The TUNEL assay was performed based on our previous reports.48 (link),49
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2

Adipose Tissue Protein Extraction and Analysis

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eWAT was harvested using the Adipose Protein Extraction Kit (MinuteTM) for protein extraction. Eighty milligrams of adipose tissue was homogenized with 250 ml of extraction buffer. After centrifugation at 2,000 g for 1 min, the tissue was transferred to a filter cartridge with a collection tube and incubated at -20°C for 20 min. After incubation, the tissue was immediately centrifuged at 2000 rpm for 1 min with the cap open. The flow-through contained total proteins from the adipose tissue. Then, 30 mg of total tissue lysate was separated by SDS-PAGE (10% separation gel and 5% concentration gel). Electrophoresis was performed at 70 V for 0.5 h and 110 V for 1 h. The protein bands were transferred to a PVDF membrane using e-Blot (Genscript), and 5% BSA was added for 1 h to block the membrane. The membrane was then made to react with primary antibodies against ATGL (1:1000, Abcam), HSL (1:3000, Abcam), p-HSL (1:1000, Sab), NLRP3 (1:1000, Abcam), Caspase-1 (1:1000, Abcam), IL-1β (1:1000, Abcam), MAOA (1:1000, Abcam), β-actin (1:1000, Abcam), and tyrosine hydroxylase (1:1000, Abcam) at 4°C overnight. Incubation with the corresponding secondary antibodies (diluted to 1:3000, Abcam) was performed at room temperature (18°C -25°C) for 1 h.
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3

Immunohistochemical Analysis of Dorsal Penile Nerves

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The constructed paraffin-embedded tissue blocks were cut in 5-μm-thick sections to perform H&E staining, Masson’s trichrome staining and immunohistochemical staining. Immunohistochemical staining was performed using the Ventana BenchMark XT automated stainer (Ventana, Tucson, AZ). The primary antibodies of neurofilament (1:50, MS-359-S1; Thermo Fisher Scientific, Cheshire, UK), tyrosine hydroxylase (1:100, Abcam, Cambridge, UK), nNOS (1:100, sc648; Santa Cruz Biotechnology, Santa Cruz, CA, USA) and Ki-67 (1:100, Abcam, Cambridge, UK) were performed. A Ventana UltraView DAB detection kit was applied, and the slides were counterstained with hematoxylin, dehydrated, and mounted. The determined criterion for the main and minor branches of the DPNs were the sizes of the nerve branches. In fact, the sizes of the main branches of the DPNs were similar to those of the dorsal artery. Therefore, if the nerve branches were smaller than the dorsal artery at the dorsal side of the penis between the tunica albuginea and the Buck’s fascia, it was determined to a minor branch of the DPNs.
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4

Immunofluorescence Staining of Neural Cells

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In brief, cells of each group were fixed in 4% paraformaldehyde, permeabilized with 0.3% Triton-X100, and blocked in phosphate buffer solution (PBS) containing 5% normal goat serum (Beijing Dingguo Changsheng Biotechnology). Cells were incubated with monoclonal antibodies overnight with 4°C. Antibody dilutions were as follows: β III tubulin, 1:200 (Tuj1; Abcam, Cambridge, UK); tyrosine hydroxylase, 1:200 (TH, Abcam, Cambridge, UK); Nestin, 1:200 (Abcam, Cambridge, UK); Neun, 1:200 (Abcam, Cambridge, UK); LXR α receptor, 1:200 (Abcam, Cambridge, UK); LXR β receptor, 1:200 (Gene Tex, Irvine, CA, USA). After extensive washing three times in PBS, suitable secondary antibodies anti-mouse IgG-Alexa Fluor 488, anti-rabbit IgG-Alexa Fluor 488, anti-mouse IgG-Cy3, and anti-rabbit IgG-Alexa Fluor 594 were diluted at 1:200 in PBS, and then suitable secondary antibodies were added and incubated in darkness for 1 h at room temperature. Nuclear stain 4,6-diamidino-2-phenylindole (DAPI; Beyotime Biotechnology, Shanghai, China) was then used for nuclear staining.
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5

Inguinal WAT Protein Extraction and Analysis

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Inguinal white adipose tissue was harvested using the Adipose Protein Extraction Kit (MinuteTM) for protein extraction. 80 μg of adipose tissue was homogenized with 300 μl extraction buffer. After centrifuging at 2,000 rpm for 1 min, the tissue was transferred to a filter cartridge with a collection tube and incubated at −20°C for 15–20 min. After incubation, it was immediately centrifuged at 2000 rpm for 1–2 min with cap open. The flow-through contained total proteins from adipose tissue. Then, 20 μg of total tissue lysate was separated by SDS-PAGE (10% of separation gel and 5% of concentration gel). The electrophoresis contained 80 V for 0.5 h and 120 V for 1 h. The protein bands were transferred to a PVDF membrane using Trans-Blot (Bio-Rad), and 5% BSA was added for 2 h for blocking the membrane. The membrane was then reacted with primary antibodies against: UCP1 (1:1000, Abcam), norepinephrine transporter (1:1000, Abcam), β-actin (1:1000, Abcam), β3 adrenergic receptor (1:1000, Abcam), and tyrosine hydroxylase (1:1000, Abcam) under 4°C overnight. Incubation with the corresponding secondary antibodies (diluted to 1:3000, Abcam) was performed at room temperature for 1 h.
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6

Parkinson's Disease Rat Model Establishment

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TSG (purity > 99%) was obtained from the National Institute for the Control of Pharmaceutical and Biological Products (Beijing, China). 6-OHDA was bought from Sigma-Aldrich (St. Louis, MO, USA). Anti-CR3 complement receptor (OX-42) and tyrosine hydroxylase (TH) antibodies were bought from Abcam Inc. (Cambridge, MA, USA). Biotinylated secondary antibodies were from Vector Laboratories (Burlingame, CA, USA). Enzyme-linked immunosorbent assay (ELISA) kits were from R&D Systems (Minneapolis, MN, USA). Griess reagent was obtained from Beyotime Biotechnology (Shanghai, China). Mitogen-activated protein kinase (MAPK) pathway antibodies were the products of Cell Signaling Technology (Beverly, MA, USA).
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7

Quantitative Protein Profiling in Cells

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Protein extractions were performed as previously described28 (link),29 (link). Primary antibodies p-ERK (Thr202/Tyr204, Cell Signaling, #4370S; 1:1000 dilution), ERK1/2 (C-9, Santa Cruz Biotechnology, SC-514302; 1:200 dilution), tyrosine hydroxylase (Abcam, ab75875; 1:1000 dilution), adiponectin (rabbit polyclonal, home-made), Connexin43 (Santa Cruz Biotechnology, SC-6560-R) and α-tubulin (DM1A, Cell Signaling, #3873S) were used. Protein abundance was detected using one of the following secondary antibodies: goat anti-mouse IRDye 680RD (LI-COR Biosciences, 926-68070), goat anti-rabbit IRDye 800CW (LI-COR Biosciences, 925-32211) at 1:10,000 dilutions. Antibody decorated membranes were then visualized on a LI-COR Odyssey infrared scanner (LI-COR Biosciences). The scanned data were analyzed using Odyssey Version 3.0 software (LI-COR Biosciences).
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8

Neuronal Cell Death Screening Assay

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Hela, Hek293T, SK-N-SH, SK-SH5Y, and THP-1 were obtained from the Korean Cell Line Bank (KCLB, Seoul, South Korea). Cells were grown in RPMI-1640, and supplemented with 10% fetal bovine serum (FBS) and 1% penicillin–streptomycin (HyClone, PA, USA). Rotenone was obtained from Sigma-Aldrich (MO, USA). 1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine (MPTP) Hydrochloride was purchased from TCI chemicals (M2690, Tokyo, Japan) and dissolved in saline (0.9% NaCl, 3.75 mg/ml aliquots prepared fresh before injection). The chemicals used for neuronal cell death screening were: TNF-α (210-TA, Sigma-Aldrich, MO, USA), cycloheximide (66-81-9, MO, USA), actinomycin D (11805017, Thermo Fisher, MA, USA), cisplatin (D3371, TCI Chemical, Tokyo, Japan), paclitaxel (P1632, TCI Chemical, Tokyo, Japan), 5-fluorouracil (F0151, TCI Chemical, Tokyo, Japan), 6-hydroxydopamine hydrochloride (H4381, Sigma-Aldrich, MO, USA). The primary antibodies used were α-tubulin (sc-5286, Santa Cruz, TX, USA), Bax (2772 s, CST, MA, USA), tyrosine hydroxylase (ab6211, abcam, Cambridge, England), cleaved caspase-8 (9496 s, CST, MA, USA), cleaved caspase-9 (7237 s, CST, MA, USA), and p53 (sc-53394, Santa Cruz, TX, USA).
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9

Immunofluorescent Characterization of NSCs and NACs

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For identification NSCs and NACs, the cells were fixed with 4% paraformaldehyde (Sigma) for 20 minutes and washed in PBS (three times). After incubation with Hcl and washing with buffer borate, we used blocking solution (10% goat serum (Invitrogen) and 0.3% Triton X-100 (Sigma) in PBS for 30 min. Then primary antibodies were used overnight at 4°C and polyclonal antibody anti-goat rabbit Conjugated with FITC was used as a secondary antibody. The antibodies were polyclonal anti-Sox2 antibody(anti-Sox2) (Abcam) and polyclonal anti-Nestin antibody (Abcam) [5] . The differentiated cells were incubated overnight at 4 ° C with a primary anti-TH polyclonal antibody (Tyrosine hydroxylase) (Abcam) [6, 18, (link)19] . Finally, the samples were washed with PBS and examined under a fluorescent microscope.
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10

Immunocytochemistry of Neural Markers

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In brief, cells of each group were xed in 4% paraformaldehyde and permeabilized with 0.3% Triton-X100 and blocked in phosphate buffer solution (PBS) containing 5% normal goat serum (Beijing Dingguo Changsheng Biotechnology, China). Cells were incubated with monoclonal antibodies overnight with 4℃. Antibodies' dilutions were as follows: β III tubulin, 1:200 (Tuj1; Abcam, Cambridge, UK); Tyrosine hydroxylase, 1:200 (TH, Abcam, Cambridge, UK); Nestin, 1:200 (Abcam, Cambridge, UK); Neun, 1:200 (Abcam, Cambridge, UK); LXR α receptor, 1:200 (Abcam, Cambridge, UK); LXR β receptor, 1:200 (Gene Tex, USA). After extensive washing for 3 times in PBS, suitable secondary antibodies anti-mouse IgG-Alexa Fluor 488, anti-rabbit IgG-Alexa Fluor 488, anti-mouse IgG-Cy3, anti-rabbit IgG-Alexa Fluor 594 were diluted at 1:200 in PBS, and then suitable secondary antibodies were added and incubated in darkness for 1h at room temperature. Then nuclear stain 4, 6-diamidino-2-phenylindole (DAPI; Beyotime Biotechnology, Shanghai, China) was used for nuclear staining.
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