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7 protocols using cd51 pe

1

Induction of Pyroptosis and IBD in Mice

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Lipopolysaccharides (LPS) (E. coli O111:B4) and nigericin (14K05-MM) used to induce pyroptosis were purchased from Invitrogen. Dextran sodium sulfate (DSS) (#118K7374V) used to induce inflammatory bowel disease (IBD) mouse model were obtained from Sigma-aldrich. Anti-mouse antibodies like NLRP3 (#AG-20B-0014, Adipogen), Caspase1-p20 (#AG-20B-0042, Adipogen), IL-1β (#12426, Cell Signaling Technology), GSDMDC1 (#sc-393656, Santa Cruz Biotechnology), alpha Tubulin (#66031-1-1 g, Proteintech), HRP goat anti-mouse IgG antibody (#EK010, Zhuangzhibio), and HRP goat anti-rabbit IgG antibody (#EK020, Zhuangzhibio) were used for immunoblot analysis. The anti-mouse antibodies used for flow cytometry analysis were as follows: APC-CD105 (#MJ7/18, Biolegend), APC-CD90 (#OX-7, BD), PE-CD44 (#IM7, BD, USA), PE-CD51 (#RMV-7, eBioscience), APC-CD3 (#17A2, Biolegend), APC-CD45R/B220 (#RA3-6B2, Biolegend), FITC-CD14 (#Sa14-2, Biolegend), FITC-CD11c (#117306, Biolegend), APC-CD11b (#101212, Biolegend) and APC-Gr1 (#17–5931, eBioscience). The IL-1β Enzyme-Linked Immunosorbent Assay (ELISA) kit was purchased from R&D Systems (#P16807).
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2

Immunoblot and Immunofluorescence Analysis of NLRP3 Inflammasome

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LPS (E. coli O111:B4) and nigericin (14K05-MM) were from Invitrogen. DSS (#118K7374V) were from Sigma-aldrich. Anti-mouse antibodies used for immunoblot analysis were: IL-1β (#12426, Cell Signaling Technologies), NLRP3 (#AG-20B-0014, Adipogen), Caspase-1 p20 (#AG-20B-0042, Adipogen), alpha Tubulin (#66031-1-1g, Proteintech), Caspase-11 p20 (#AG-20B-0061, Adipogen). Anti-mouse antibodies used for immunofluorescent staining analysis were: GSDMDC1 (#sc-393656, Santa Cruz Biotechnology), FITC Goat Anti-Mouse IgG Antibody (L146A, Gene Copoeia), AF647TM Goat Anti-Mouse IgG Antibody (L125A, Gene Copoeia). Anti-mouse antibodies used for flow analysis were: APC-CD45 (#30-F11, Biolegend), APC-Ter119 (#17-5921, eBioscience), PE-CD44 (#IM7, BD, USA), PE-CD51 (#RMV-7, eBioscience), APC-CD90 (#OX-7, BD), APC-CD105 (#MJ7/18, Biolegend), PE-CD146 (#P1H12, eBioscience), PE-CD166 (#105902, R&D), FITC-Sca-1 (#122505, Biolegend), APC-CD3 (#17A2, Biolegend), FITC-CD11c (#117306, Biolegend), APC-CD11b (#101212, Biolegend), APC-Gr1 (#17-5931, eBioscience), FITC-F4/80 (#123108, Biolegend), APC-CD19 (#17-5921, eBioscience), and FITC-CD14 (#Sa14-2, Biolegend).
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3

Antibody Panel for Mouse Cell Analysis

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The following antibodies were used for flow cytometry: Anti-CD150-PE (TC15–12F12.2; 115904), anti-CD117-PE/Cy7 (2B8; 105814), anti-CD45.2-PE (104; 109807), anti-CD48-Alexa Fluor 647 (HM48–1; 103416) were purchased from BioLegend (San Diego, CA). anti-CD45-APC-eFluor 780 (30-F11; 47–0451-82), anti-Ter119-APC-eFluor 780 (TER-119; 47–5921-82), Streptavidin APC-eFluor 780 (47–4317-82), anti-CD31-PE/Cy7 (MEC13.3; 25–0311-82), anti-CD45.1-FITC (A20; 11–0453-85), anti-B220-APC-eFluor 780 (RA3–6B2; 47–0452-82), anti-CD4-PE/Cy7 (GK1.5; 25–0041-82), anti-CD8a-PE/Cy7 (53–6.7; 25–0081-85), CD51-PE (RMV-7; 13–0512-85), anti-PDGFRα (CD140a)-APC (APA5; 17–1401-81), anti-Ly6A/E(Sca-1)-FITC (D7; 11–5981-82), Anti-CD45-PerCp-Cyanine5.5 (30-F11; 45–0451-82), anti-CD11b (Mac-1)-PE (M1/70; 12–0112-83) were purchased from eBioscience (Thermo Fisher). Anti-lineage panel cocktail (TER-119, RB6–8C5, RA3–6B2, M1/70, 145–2C11 at 1:50 dilution) was from BD Biosciences (559971). Unless otherwise specified, all antibodies were used at a 1:100 dilution. All antibodies were anti-mouse and their specificity was validated in previous studies performed in our laboratory3 (link),8 (link),12 (link),27 (link)–29 (link).
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4

Antibody Panel for Mouse Cell Analysis

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The following antibodies were used for flow cytometry: Anti-CD150-PE (TC15–12F12.2; 115904), anti-CD117-PE/Cy7 (2B8; 105814), anti-CD45.2-PE (104; 109807), anti-CD48-Alexa Fluor 647 (HM48–1; 103416) were purchased from BioLegend (San Diego, CA). anti-CD45-APC-eFluor 780 (30-F11; 47–0451-82), anti-Ter119-APC-eFluor 780 (TER-119; 47–5921-82), Streptavidin APC-eFluor 780 (47–4317-82), anti-CD31-PE/Cy7 (MEC13.3; 25–0311-82), anti-CD45.1-FITC (A20; 11–0453-85), anti-B220-APC-eFluor 780 (RA3–6B2; 47–0452-82), anti-CD4-PE/Cy7 (GK1.5; 25–0041-82), anti-CD8a-PE/Cy7 (53–6.7; 25–0081-85), CD51-PE (RMV-7; 13–0512-85), anti-PDGFRα (CD140a)-APC (APA5; 17–1401-81), anti-Ly6A/E(Sca-1)-FITC (D7; 11–5981-82), Anti-CD45-PerCp-Cyanine5.5 (30-F11; 45–0451-82), anti-CD11b (Mac-1)-PE (M1/70; 12–0112-83) were purchased from eBioscience (Thermo Fisher). Anti-lineage panel cocktail (TER-119, RB6–8C5, RA3–6B2, M1/70, 145–2C11 at 1:50 dilution) was from BD Biosciences (559971). Unless otherwise specified, all antibodies were used at a 1:100 dilution. All antibodies were anti-mouse and their specificity was validated in previous studies performed in our laboratory3 (link),8 (link),12 (link),27 (link)–29 (link).
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5

Phenotyping Murine and Human Leukemic Cells

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Murine leukemic cells were analyzed by flow cytometry using the following antibodies: CD45.1-APC (BD PharMingen, USA), Lineage cocktail (StemCell Technologies Inc, Canada), Sca-1-PECy7 and c-kit-PE (BD PharMingen). For human leukemic cells, CD45-APC, CD34-BV421, CD90-FITC (BD PharMingen) antibodies were used. For MSC, anti-CD106 (VCAM-1)-biotin, CD51-PE (eBioscience, CA, USA.), CD140a (PDGFRa)-APC, Sca- 1-PE-Cy7 (BD PharMingen) were used.
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6

Multiparametric Flow Cytometry Analysis of Musculoskeletal Cell Types

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Single cell suspensions were stained with fluorochrome-conjugated monoclonal antibodies and a 2.4G2 blocking antibody in the dark for 30 min on ice. Samples were run on a FACSAria III (BD Biosciences), and analyzed using FlowJo (Tree Star Inc). Maintenance of YFP expression during intranuclear staining was performed as previously described28 (link). The antibodies listed below were used for flow cytometry: CD4-eF450 (Clone: GK1.5, eBioscience), CD29-APC-eF780 (Clone: BioHMb1-1, Invitrogen), CD45-BV570 (Clone: 30-f11, Biolegend), CD49f-PerCP-eF710 (Clone: BioGoH3, Invitrogen), CD51-PE (Clone: RMV-7, eBioscience), CD105-APC (Clone: MJ7/18, eBioscience), CD105-eF450 (Clone: MJ7/18, eBioscience), CD200-PerCP-eF710 (Clone: OX90, ebioscience), CD202b-AF647 (Clone: TEK, Biolegend), Lineage (CD3, B220, CD11b, GR-1, TER11-9)-PerCP-Cy5.5 (BD Biosciences), TER119-SuperBright645 (Clone: TER119, Invitrogen), Thy1.2 (CD90.2)-AF700 (Clone: 30-H12, Biolegend), and 6C3-Pe-Cy7 (Clone: 6C3, Biolegend). The following cellular subsets were sorted on the FACSAria III (BD Biosciences): splenic T cells (CD45+TCRβ+), splenic B cells (CD45+CD19+B220+), end bone chondrocytes (CD45Lin), end bone lymphocytes (CD45+Lin+), wrist chondrocytes (CD45Lin), wrist lymphocytes (CD45+Lin+).
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7

Comprehensive Flow Cytometry Analysis

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Single cell suspensions were stained with fluorochrome-conjugated monoclonal antibodies and a 2.4G2 blocking antibody in the dark for 30 minutes on ice. Samples were run on a FACSAria III (BD Biosciences), and analyzed using FlowJo (Tree Star Inc). Maintenance of YFP expression during intranuclear staining was performed as previously described 28 (link) . The antibodies listed below were used for flow cytometry: CD4-eF450 (Clone: GK1.5, eBioscience), CD29-APC-eF780 (Clone: BioHMb1-1, Invitrogen), CD45-BV570 (Clone: 30-f11, Biolegend), CD49f-PerCP-eF710 (Clone: BioGoH3, Invitrogen), CD51-PE (Clone: RMV-7, eBioscience), CD105-APC (Clone: MJ7/18, eBioscience), CD105-eF450 (Clone: MJ7/18, eBioscience), CD200-PerCP-eF710 (Clone: OX90, ebioscience), CD202b-AF647 (Clone: TEK, Biolegend), Lineage (CD3, B220, CD11b, GR-1, CDC11c, TER11-9) -PerCP-Cy5.5 (BD Biosciences), TER119-SuperBright645 (Clone: TER119, Invitrogen), Thy1.2 (CD90.2)-AF700 (Clone: 30-H12, Biolegend), and 6C3-Pe-Cy7 (Clone: 6C3, Biolegend).
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