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3 protocols using slc5a8

1

Glyceryl Tributyrate Dietary Modulation

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Glyceryl Tributyrate was purchased from Sigma-Aldrich (St. Louis, MO). Pair-fed control diet and modified Lieber-DeCarli high-fat diet were purchased from Dyets, Inc. (product number 710260; Bethlehem, PA). All primers for quantitative real-time reverse transcription polymerase chain reaction (qRT-PCR) were synthesized by Integrated DNA Technologies (Coralville, IA). Primary antibodies were purchased from the following companies: Occludin (Hycult Biotech, Plymouth Meeting, PA); GPR109A (Bioss, Woburn, MA); tumor necrosis factor-alpha (TNFα; R&D Systems, Minneapolis, MN); Zonula Occluden-1 (ZO-1) and SLC5A8 (Abcam, Cambridge, MA).
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2

Intestinal Epithelial Cell Protein Analysis

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CD326+ purified IECs were harvested from animals that received syngeneic (BALB/c → BALB/c) or allogeneic (C57BL/6J → BALB/c) BMT. Whole cell lysates were next obtained and protein concentrations determined with Pierce BCA Protein Assay (Thermo Scientific). Equal amounts of protein (20 µg) were separated by SDS-PAGE gel electrophoresis (120V, 1.5h) and subsequently transferred to polyvinylidene difluoride (PVDF) membrane using a Bio-Rad semi-dry transfer cell (Hercules, CA) (20V, 1h). The following antibodies were used to analyze the membranes with dilutions in accordance with the manufacturers specification sheet: α-tubulin (Cell Signaling, clone 11H10), Acetyl histone H4 (Lys5/8/12/16) (EMD Millipore, clone 3HH-4C10), SLC5A8 (abcam), GPR43 (abcam), Occludin (abcam, clone EPR8208), JAM (abcam, clone EP1042Y), and Claudin 5 (abcam). Secondary anti-rabbit antibody conjugated to HRP (Jackson ImmunoResearch, Cat No. 111-035-003) was used to detect primary antibodies, where needed. Densitometric analysis was performed using ImageJ software (National Institutes of Health; Bethesda, MA).
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3

Intestinal Epithelial Cell Protein Analysis

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CD326+ purified IECs were harvested from animals that received syngeneic (BALB/c → BALB/c) or allogeneic (C57BL/6J → BALB/c) BMT. Whole cell lysates were next obtained and protein concentrations determined with Pierce BCA Protein Assay (Thermo Scientific). Equal amounts of protein (20 µg) were separated by SDS-PAGE gel electrophoresis (120V, 1.5h) and subsequently transferred to polyvinylidene difluoride (PVDF) membrane using a Bio-Rad semi-dry transfer cell (Hercules, CA) (20V, 1h). The following antibodies were used to analyze the membranes with dilutions in accordance with the manufacturers specification sheet: α-tubulin (Cell Signaling, clone 11H10), Acetyl histone H4 (Lys5/8/12/16) (EMD Millipore, clone 3HH-4C10), SLC5A8 (abcam), GPR43 (abcam), Occludin (abcam, clone EPR8208), JAM (abcam, clone EP1042Y), and Claudin 5 (abcam). Secondary anti-rabbit antibody conjugated to HRP (Jackson ImmunoResearch, Cat No. 111-035-003) was used to detect primary antibodies, where needed. Densitometric analysis was performed using ImageJ software (National Institutes of Health; Bethesda, MA).
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