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3 protocols using sirt1 sc 15404

1

Quantitative Western Blot Analysis

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Cells (hRPE and HUVECs) were lysed in RIPA buffer (Cell Signaling Technology, Inc., MA, USA) and proteins were separated using 4-15% Tris-HCl polyacrylamide gradient gels (Bio-Rad) at 120 V. The proteins were transferred to polyvinylidene fluoride transfer membrane (Millipore, Billerica, MA). The membranes were blocked (5% milk) and incubated with primary antibodies overnight at 4°C. The membranes were washed and incubated with the relevant horseradish peroxidase (HRP)-conjugated secondary antibodies (Vector Laboratories, Inc. Burlingame, CA) for 1 hour at room temperature. Protein bands were developed by enhanced chemiluminescent (ECL) substrates (Thermo Scientific, Rockford, IL). All the results were calculated by mean pixel density x band area in arbitrary units using Image J software. GAPDH (MAB374, Millipore) was used a loading control. Antibodies detecting HIF-1α (#3716), VEGFR2 (#2479) and Phospho-VEGFR2 (#2478) were from Cell Signaling and SIRT1 (sc-15404) from Santa Cruz.
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2

Western Blot Analysis of Signaling Proteins

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Cells were lysed in RIPA buffer (50 mM Tris-HCl pH 7.4, 150 mM NaCl, 1 mM EDTA, 1% Triton X-100, 1% sodium deoxycholate, 0.1% SDS) supplemented with 1 mM PMSF, 1 μg/ml aprotinin, 1 μg/ml leupeptin. Protein concentration was measured by BCA Protein Assay (Pierce). Total protein (10 μg) was resolved on 10% SDS-PAGE, transferred to PVDF membranes (Immobilon-P, Millipore), and probed with primary antibodies against MTA2 (sc-55566), HDAC1 (sc-7872), SIRT1 (sc-15404) and p53 (sc-126) (Santa Cruz); YY1 (#2185), p21 (#2946), PUMA (#4976), CDK4 (#2906), CDK6 (#3136) and FAS (#8023) (Cell Signaling); MDM4 (mAb 8C6) and MDM2 (mAb 2A10) (EMD Bioscience); or anti-HA (clone 3F10, Roche), followed by incubation with horseradish peroxidase-(HRP) conjugated sheep anti-mouse or anti-rabbit Ig (Amersham). Signals were developed using SuperSignal West Femto (Pierce). Membranes were stripped and reprobed using α-tubulin mouse mAb (B-5-1-2, Sigma) or β-actin (JLA20, Millipore). Immunoblots were quantified by densitometry using VersaDoc MP 4000 (Bio-Rad).
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3

Immunofluorescence Analysis of PGC-1α and SIRT1

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Following treatment with SPD, H9C2 cells were seeded onto glass cover slips in 24-well plates. For detection of PGC-1α and SIRT1, cells were fixed in 4% paraformaldehyde for 15 min, permeabilized with PBS/0.1% Triton X-100, blocked with 3% BSA in PBS, and incubated with PGC-1α (sc-518038) and SIRT1 (sc-15404) antibodies (Santa Cruz Biotechnology, Dallas, TX, USA) overnight at 4 °C. Fluorescent secondary antibodies (ab150113 and ab150075; Abcam, Cambridge, MA, USA) were used for detection according to the manufacturer’s instructions. Immunofluorescence was assessed with a confocal microscope (Carl Zeiss LSM510, Tokyo, Japan). Confocal laser scanning microscopy analysis of PGC-1α and SIRT1 colocalization was performed for H9C2 cells.
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