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Mini gradient polyacrylamide gels

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Mini gradient polyacrylamide gels are laboratory equipment used for electrophoresis separation of biomolecules such as proteins and nucleic acids. They feature a linear gradient of polyacrylamide concentrations across the gel, enabling simultaneous separation of molecules with a wide range of molecular weights.

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3 protocols using mini gradient polyacrylamide gels

1

Western Blot Analysis of Signaling Proteins

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Whole cell lysates were prepared using boiling lysis buffer (1% SDS, 10 mM Tris.HCl, pH 74.). Protein concentrations were determined using BCA reagent (Thermo Scientific, Rockford, IL) and equal amounts of proteins were separated onto Criterion or mini gradient polyacrylamide gels (Bio-Rad, Hercules, CA) and transferred to PVDF membranes (Bio-Rad). The following primary antibodies were used: rabbit antibodies for phospho-S6 (Ser235/236), phospho-S6K(T389 ) and total S6K - were from Cell Signaling Biotechnology. Mouse anti-S6 antibody was from Cell Signaling Biotechnology. Anti-β-actin-HRP antibody was from Sigma-Aldrich (St. Louis, MO); mouse antibody for p53 (Ab-6) was from Oncogene Research products (La Jolla, CA). Secondary anti-rabbit and anti-mouse HRP-conjugated antibodies were from Cell Signaling Biotechnology as previously described [20 (link)] , [21 (link)] .
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2

Western Blot Analysis of Phospho-proteins

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Immunoblotting was performed as described previously.31 (link) In brief, whole-cell lysates were prepared using boiling lysis buffer (1% SDS, 10 mM Tris·HCl, pH 7.4). Equal amounts of proteins were separated using Criterion or mini gradient polyacrylamide gels (Bio-Rad, Hercules, CA, USA) and transferred to PVDF membranes. The following rabbit antibodies for: phospho-S6 (S235/236), phospho-S6 (S240/244), phospho ERK½, phospho-Thr 389 p70S6K, phospho-AKT (S473) and phospho-AKT (T308), phospho-IRS1 (S1101), phospho-IRS1(S636/639), IRS1 and mouse anti-S6 antibody were from Cell Signaling Biotechnology (Danvers, MA, USA). Rabbit anti-actin and mouse monoclonal anti-GAPDH antibodies were from Sigma-Aldrich and Invitrogen (Camarillo, CA, USA), respectively. Secondary anti-rabbit and anti-mouse HRP-conjugated antibodies were from Cell Signaling Biotechnology.
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3

Western Blot Analysis of Signaling Pathways

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Whole cell lysates were prepared using boiling lysis buffer (1% SDS, 10 mM Tris.HCl, pH 74.). Equal amounts of proteins were separated using Criterion or mini gradient polyacrylamide gels (Bio-Rad, Hercules, CA) and transferred to PVDF membranes. The following rabbit antibodies for: phospho-S6 (Ser235/236 and S240/244), phospho-AKT (T308), phospho ERK ½, AKT, phospho-4EBP1(T37/46) and phospho-S6K(T421/S424)- were from Cell Signaling Biotechnology (Danvers, MA). Mouse anti-phospho-Thr 389 -S6K and anti-S6 antibody were from Cell Signaling Biotechnology. Rabbit anti-actin antibody was from Sigma-Aldrich (St. Louis, MO); mouse antibodies for p21 and cyclin D1 were from from BD Biosciences (San Jose, CA) and Santa Cruz Biotechnology (Paso Robles, CA), respectively. Secondary anti-rabbit and anti-mouse HRP-conjugated antibodies were from Cell Signaling Biotechnology.
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