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65 protocols using cobas integra

1

Comprehensive Metabolic and Serological Evaluation

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Venous blood samples were collected in the morning from patients after fasting for at least 8 h and tested for glucose, total cholesterol (TC), triglycerides (TG), low-density lipoprotein (LDL) and high-density lipoprotein (HDL) using the method of Enzymatic Colorimetric, COBAS INTEGRA, supplied by Roche Diagnostics. Glycosylated hemoglobin (HbA1c) was measured using the method of High-Performance Liquid Chromatography, Bio-Rad. Aspartate aminotransferase (AST) and Alanine aminotransferase (ALT) were measured by the quantitative determination of the catalytic enzyme activity, COBAS INTEGRA systems, supplied by Roche Diagnostics. Elevated AST and ALT levels were defined as > 40 U/L for males and >32 U/L for females, and >41 U/L for males and >33 U/L for females, respectively, according to the center's laboratory assay. Serological tests for the hepatitis B surface antigen (HBsAg), hepatitis B surface antibody (HBsAb), and hepatitis C virus (HCV) antibodies were assessed for the study participants.
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2

Quantification of sCD163 and hsCRP

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sCD163 concentrations in cryopreserved plasma samples were quantified by using a commercially available ELISA kit (Quantikine, R&D Systems, Minneapolis, MN, United States of America). All samples were tested in duplicate. hsCRP concentrations in cryopreserved plasma samples were quantified by using the standard immunoturbidometric assay on the COBAS® INTEGRA system (Roche COBAS INTEGRA, Roche Diagnostics, Basel Switzerland).
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3

Assessing Psychosocial Factors in Youth Diabetes

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Medical chart review and parent/youth interview provided data on diabetes variables. Parents completed a survey to gather information on sociodemographic variables. Blood samples from both sites were analyzed centrally at the Joslin clinical laboratory for measurement of HbA1c (ref. range: 20–42 mmol/mol [4–6%], Roche Cobas Integra, Roche Diagnostics, Indianapolis, IN).Youth completed a survey assessing depressive symptoms. Adolescents and parents completed previously validated psychosocial surveys assessing diabetes adherence, diabetes-specific family conflict, youth and parent diabetes burden, and youth quality of life.
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4

HbA1c Measurement and Participant Data

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Hemoglobin A1c (HbA1c) was measured using a laboratory assay standardized to the Diabetes Control and Complications Trial (reference range, 4%-6%, [20–42 mmol ⁄ mol]). Initial A1c assays were performed with the Tosoh (Tosoh Medics, South San Francisco, CA, USA) followed by the Roche Cobas Integra (Indianapolis, IN). All values obtained with the Tosoh were standardized to the Roche assay. Biomedical data were extracted from participants’ medical records including age, sex, diabetes duration, insulin regimen, and frequency of blood glucose monitoring. Measured height and weight were used to calculate youth BMI z-score and parent BMI. Self-report data was used for three parents with missing measured height and weight. Demographic characteristics were assessed by parent self-report.
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5

Cardiometabolic Risk Factors Protocol

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Age, sex, height and weight were abstracted from medical records, and multivitamin use was obtained from self-reports. BMI (kg/m2), calculated from measured height and weight, was transformed to z-scores. Enzyme linked immunosorbent assay was used to measure serum low-density lipoprotein cholesterol (LDL-C) and high-density lipoprotein cholesterol (HDL-C). An assay standardized to the Diabetes Control and Complications Trial (reference range, 4–6%, [20–42 mmol/mol]) was used to assess HbA1c. Initially, Tosoh (Tosoh Medics) was used to conduct HbA1c assays followed by Roche Cobas Integra. Laboratory analysis of results from the two instruments on identical samples indicated no clinically significant bias.
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6

Teen Diabetes Management Characteristics

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Data were collected on the day of regularly scheduled clinical appointments. Teens and parents were interviewed by trained research assistants who collected demographic and diabetes management information. Teens and parents completed the surveys described in Section 2.3. Additional diabetes management information was obtained from electronic medical records. Teens were weighed and measured using an electronic scale and stadiometer, both appropriately calibrated, by trained personnel. Body mass index (BMI) percentiles were calculated using the Centers for Disease Control and Prevention growth charts [19 ]. Teens were categorized by weight status according to BMI percentile: underweight (<5th percentile), normal weight (5th to <85th percentile), overweight (85th to <95th percentile), and obese (≥95th percentile). Blood samples were obtained for measurement of HbA1c (ref. range: 4-6%, Roche Cobas Integra, Roche Diagnostics, Indianapolis, IN).
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7

Fasting Glucose and HbA1c Analysis

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Fasting and 2-h glucose levels were measured in serum by the routine methods used by the hospital laboratory.
Venous blood samples from pregnancy weeks 18–22 and 32–36 were stored at −80 °C. HbA1c is stable at these storage conditions [17 (link), 18 (link)]. HbA1c was analyzed over a 3-week period in October 2014 at our hospital laboratory with an immunological method on a Roche Cobas Integra (Roche Diagnostics, Mannheim, Germany) [19 (link)]. The method was calibrated against the standard from the International Federation of Clinical Chemistry and Laboratory Medicine [20 (link)]. The coefficient of variation for within-laboratory imprecision during the 3-week period was 2.0 % at HbA1c 5.2 % (33 mmol/mol) and 1.4 % at HbA1c 9.6 % (81 mmol/mol) [21 ].
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8

Plasma Metabolic Response to Beverages

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Serial blood draws from an IV catheter were performed before and 15, 30, 45, 60, 90, and 120 minutes after the start of consumption of each beverage. Laboratory samples were immediately submitted for analyses of plasma glucose (Cobas Integra, Roche Diagnostics, Indianapolis, IN). Samples were centrifuged and stored at −80 C for batched analyses of glucagon (RIA, glucagon double antibody, Diagnostics Products Corporation, Los Angeles, CA), insulin (Access Chemluminescent Immunoassay, Beckman Coulter, Fullerton, CA), and metabolic profiling. Metabolite profiling was carried out as previously described [18 (link)]. Absolute quantification of plasma benzoate and hippurate was determined using external calibration curves prepared via serial dilution of sodium benzoate-d5 and N-benzoyl-d5-glycine (C/D/N Isotopes, Pointe-Claire QC) in pooled human plasma (BioreclamationIVT, Westbury NY). Standard curves consisting of eight concentration points for benzoate-d5 and eleven points for N-benzoyl-d5-glycine were analyzed in triplicate.
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9

Routine HbA1c Measurement in Teens

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Each teen provided blood for hemoglobin A1c (HbA1c) assay as part of routine clinical care, measured by the Roche Cobas Integra (Roche Diagnostics, Indianapolis, IN, Ref. range: 4%–6% [20–42 mmol/mol]).
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10

Adolescent-Parent Diabetes Evaluation

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Data were collected through joint adolescent-parent interview, medical record review, and glucose meter/pump downloads. HbA1c assay was performed as part of routine clinical care (Roche Cobas Integra, reference range 4.0–6.0%). Parents provided demographic data. Adolescents and parents completed the following surveys on tablet computers using REDCap software [22 (link)].
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