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Triisopropylsilane tis

Manufactured by Merck Group
Sourced in United States, Germany

Triisopropylsilane (TIS) is a commonly used silylating agent in organic synthesis and chemical laboratories. It serves as a protecting group for alcohols, phenols, and other hydroxyl-containing functional groups. TIS is a colorless, volatile liquid with a mild odor.

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14 protocols using triisopropylsilane tis

1

Solid-Phase Synthesis of Amidated Peptides

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The above amidated peptides were synthesized via solid-phase peptide synthesis on a CEM Discover Microwave Peptide Synthesizer (Matthews, NC) using the Fmoc-protection strategy on Rink Amide-ChemMatrix resin (0.5 mmol/g). For coupling reactions, amino acids (5 eq) were activated with N,N′-diisopropylcarbodiimide (DIC, 5 eq, Oakwood Chemical)/Oxyma (5 eq, Oakwood Chemical) and heated to 90 °C for 2 min while bubbling with nitrogen gas in N,N-dimethylformamide (DMF, Oakwood Chemical). Fmoc deprotection was carried out with 20% piperidine (Sigma-Aldrich) in DMF supplemented with 0.1 M 1-hydroxybenzotriazole hydrate (HOBt, Oakwood Chemical) at 90 °C for 1 min while bubbling with nitrogen gas. The H3 Cleavage from the resin was performed with 92.5% TFA, 2.5% triisopropylsilane (TIS, Sigma-Aldrich), 2.5% 1,2-ethanedithiol (EDT, Sigma-Aldrich), and 2.5% H2O for 2 h at 25 °C. The crude peptide was then precipitated by the addition of a 10-fold volume of cold ether and centrifuged at 4000 RCF for 10 min at 4 °C. The pellet was resuspended in Solvent A and purified via preparative RP-HPLC using a linear gradient from 0 to 30% Solvent B over 30 min. Fractions were analyzed on analytical RP-HPLC and ESI-MS and those containing pure product ( > 95%) were pooled, lyophilized, and stored at –80 °C.
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2

Peptide Synthesis and Cytotoxicity Evaluation

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N-fluorenyl-9-methoxycarbonyl (Fmoc)-protected L-amino acids, piperdine Rink-Amide resin (100-200 mesh, loading: 0.51 mmol g-1), diisopropylethylamine (DiEA) and o-benzotriazole-N,N,N',N- tetramethyluroniumhexafluorophosphate (HBTU) were provided by GL Biochem Ltd. (Shanghai, China). HAuCl4, Diisopropylethylamine (DIEA), dimethylformamide (DMF), trifluoroacetic acid (TFA) and piperdine were obtained by Shanghai Reagent Chemical Co. (China). Triisopropylsilane (TIS) was purchased from Sigma-Aldrich (USA). MTT, Dulbecco's modified Eagle's medium (DMEM), trypsin, fetal bovine serum (FBS), Penicillin-streptomycin were provided by GIBCO Invitrogen Corp. All other reagents were used without further purification.
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3

Solid-Phase Peptide Synthesis Protocol

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N-Fluorenylmethoxycarbonyl (Fmoc)-protected amino-acids, and NovaSyn-TGR resin (loading 0.18 mM/g, 0.33 mM scale synthesis)” resin were purchased by Merck (Darmstadt, Germany); N,N-diisopropyl-ethylamine (DIEA), N,N-dimethylformamide (DMF, peptide synthesis grade), piperidine, dimethylformammide (DMF), N-hydroxybenzotriazole (HOBt), 2-(1-H-benzotriazole-1-yl)-1,1,3,3-tetramethyluronium tetrafluoroborate (TBTU), triisopropylsilane (TIS), and trifluoroacetic acid (TFA), were purchased from Sigma-Aldrich (Munich, Germany). Peptide solution was prepared dissolving lyophilized peptide in water. Ultrapure Milli-Q water (resistivity > 18 MΩ·cm−1) was used for all experiments.
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4

Solid-Phase Peptide Synthesis Protocol

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All Fmoc-protected amino acids, N,N′-diisopropylcarbodiimide (DIC) and oxyma
(ethyl cyanohydroxyiminoacetate), were purchased from Iris Biotech
GmbH (Marktredwitz, Germany). Dichloromethane (DCM), piperidine, triisopropylsilane
(TIS), and trifluoroacetic acid (TFA) were purchased from Sigma-Aldrich
(Milano, Italy). Tentagel S RAM resin was purchased from Rapp Polymere
(Tuebingen, Germany). Acetonitrile and peptide synthesis-grade N,N-dimethylformamide were purchased from Carlo Erba (Milano,
Italy).
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5

Synthesis and Characterization of Glycopeptides

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Amino acids and amide resin were purchased from Novabiochem. 2-(7-Aza-1H-benzotriazole-1-yl)-1,1,3,3-tetramethyluronium hexafluorophosphate (HATU), 1-hydroxy-7-azabenzotriazole (HOAt), N,N-diisopropylethylamine (DIEA), dimethylformamide, trifluoroacetic acid (TFA), diethyl ether, and methanol were purchased from Fisher Scientific. Piperidine, 1,8-Diazabicyclo[5.4.0] undec-7-ene, triisopropylsilane (TIS), and sodium methoxide were purchased from Sigma-Aldrich. Peptides GQ11 (N(GlcNAc)SGSGQQKFQFQFEQQ) and NQ11 (NSGSGQQKFQFQFEQQ) were synthesized following standard Fmoc solid phase peptide synthesis protocols and purified by RP-HPLC as previously reported19 . Peptide molecular weight was assessed using matrix-assisted laser desorption/ionization-time of flight (MALDI-TOF) in a Bruker Microflex LRF system and α-cyano-4-hydroxycinnamic acid as the matrix.
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6

Synthesis and Purification of Peptide Derivatives

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Acetonitrile (ACN), 2-chlorotrityl chloride resin (0.8 mmol g–1, Bachem dichloromethane (DCM) (Chem-supply), hydrazine monohydrate 64–65% (Sigma-Aldrich), methanol (Scharlau), N,N′-diisopropylethylamine (DIEA) (Sigma-Aldrich), Fmoc-amino acids (Merck), l-3,5-dihydroxyphenylglycine (Dpg) (Sigma Aldrich), (1-cyano-2-ethoxy-2-oxoethylidenaminooxy)dimethylamino-morpholino-carbenium hexafluorophosphate (COMU) (Merck), formic acid (FA), triethylamine (TEA) (Sigma-Aldrich), 2,6-lutidine (Sigma-Aldrich), 1,8-diazabicyclo[5.4.0]-undec-7-ene (DBU) (Sigma-Aldrich), N,N-dimethylformamide (DMF) (Ajax Finechem), trifluoroacetic acid (TFA) (Sigma-Aldrich), triisopropylsilane (TIS) (Sigma-Aldrich), urea (Sigma-Aldrich), NaH2PO4 (Sigma-Aldrich), NaNO2 (Sigma-Aldrich), coenzyme A (Affymetrix).
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7

Peptide Synthesis Reagents Protocol

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2-(1H-Benzotriazol-1-yl)-1,1,3,3-tetramethyluronium hexafluorophosphate (HBTU) was obtained from Peptides International (Louisville, Kentucky). 1-[Bis (dimethylamino)methylene]-1H-1,2,3-triazolo [4,5-b] pyridinium 3-oxid hexafluorophosphate (HATU) and N,N-diisopropylethylamine (DIEA) were obtained from Applied Biosystems (Foster City, California). Piperidine was from Spectrum (Gardena, California). N,N-Dimethylformamide (DMF), methylene chloride (DCM), methanol, diethyl ether, and trifluoroacetic acid (TFA) were from Thermo Fisher Scientific (Pittsburg, Pennsylvania). Triisopropylsilane (TIS) and 1,2-Ethanedithiol (EDT) were from Sigma-Aldrich (Saint Louis, Missouri). HPLC-grade acetonitrile (ACN), amino acids, and TentaGel resin (NovaSyn TGR) were from EMD Millipore (Billerica, Massachusetts). Side chain protecting groups were: Arg (Pbf), Asn (Trt), Asp (OtBu), Cys (Trt), Gln (Trt), Glu (OtBu), His (Trt), Lys (Boc), Ser (tBu), Thr (tBu), Trp (Boc), and Tyr (tBu).
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8

Lipid Probes for Oxidative Stress

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PC, PE, and PI were obtained from Avanti Polar Lipids, Inc. (Alabaster, AL, USA). 9-Fluorenylmethoxycarbonyl (Fmoc) amino acids and Oxyma pure were obtained from CEM Co. (Matthews, NC, USA). SM, Ch, ergosterol, trifluoroacetic acid (TFA), triisopropylsilane (TIS), diisopropylcarbodiimide (DIC), and phenol were purchased from Sigma-Aldrich Co. (St. Louis, MO, USA). DCFH-DA, MitoSOX Red, and SYTOX Green were obtained from Molecular Probes Inc. (Eugene, OR, USA). FNR675 N-hydroxysuccinimide ester was purchased from BioActs (Incheon, Korea). All other reagents were of analytical grade.
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9

Peptide Synthesis and ELISA Reagents

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Alkaline phosphatase (AP)-conjugated goat-anti-human IgG, streptavidin, AP substrate tablets (para-nitrophenylphosphate (pNPP)), Tris, Tween, sodium chloride, sodium carbonate, ethanolamine, MgCl2, D-Biotin, hexafluorophosphate azabenzotriazole tetramethyl uranium (HATU), milliQ water, trifluoroacetic acid (TFA), triisopropylsilane (TIS), and N,N-diisopropylethylamine (DIPEA) were from Sigma Aldrich (St. Louis, MO, USA). Synthetic EBNA1 and EBNA2 peptides were purchased from Schäfer-N (Lyngby, Denmark) (Table 1), and were generated on TentaGel resin using standard Fmoc-based solid-phase peptide synthesis (SPPS) [54 (link)]. The peptides were synthesized as peptide acids. EBNA3 peptides were synthesized by microwave-assisted SPPS [55 (link),56 (link)]. Wang resin, Oxyma Pure, and DIC was from Iris Biotech AG (Marktredwitz, Germany). Fmoc-L-amino acids were from Novabiochem (Darmstadt, Germany). Acetonitril was from Carlo Erba (Milano, Italia).
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10

Peptide Synthesis and Antimicrobial Evaluation

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All of the reagents for the
synthesis of the peptides were obtained from commercial sources and
used without further purification. Fmoc amino acid coupling reagents
[N,N′-diisopropylcarbodiimide
(DIC) and ethyl cyanohydroxyiminoacetate (oxyma)] were purchased from
Calibochem/Novabiochem AG (Laufelfinger, Switzerland). Trifluoroacetic
acid (TFA), piperidine, and triisopropylsilane (TIS) were purchased
from SigmaAldrich. Solvents for peptide synthesis, purification, and
analysis, including N,N-dimethylformamide
(DMF), dichloromethane (DCM), diethyl ether, and acetonitrile (ACN),
were obtained from Bio-Lab Ltd. The rink amide resin (0.57 mmol/g)
was purchased from Iris Biotech Gmbh, and the manufacturer’s
reported loading was used to calculate the yields of the final product.
Colistin and CV (C3886) were purchased from Sigma-Aldrich (Rehovot,
Israel). Sterile 96-well U-bottom (BN36010096D) and flat bottom (BND003CSL)
polystyrene plates were purchased from Bar-Naor (Ramat Gan, Israel).
Basal Medium 2 (BM2) and Luria-Bertani (LB) medium were provided by
the Weizmann Bacteriology Unit. Experiments were performed in at least
three biological repeats with technical repeats.
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