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5 protocols using biliverdin

1

Multimodal Live-Cell Imaging Protocol

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Cell images were taken with a Leitz-Wetzlar Type 307 microscope equipped with a 12-bit CCD camera and a Nikon Eclipse Ti2 microscope. Fluorescence channels were merged using ImageJ software. Timelapse imaging was conducted with HeLa cells stably expressing GFP-tagged GalT and HeLa cells stably expressing GFP-tubulin on an Olympus FluoView1000 using a 20x/0.95 NA water objective. Z-stack slices were optimized for the objective at 1.18 mm thickness. For the duration of the imaging, cells were on a 37 °C heat plate and maintained in L-15 media (Thermo Scientific, Waltham, MA) supplemented with 10% fetal bovine serum. Cells transfected with iRFP-tagged plasmids were incubated with 5 μM biliverdin (Cayman Chemical, Ann Arbor, MI) for 30 min prior to imaging.
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2

Biliverdin Extraction from Arthrospira platensis

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Grounded powder of Arthrospira platensis (lot number D1246) was purchased from Abundance (Kfar Rupin, Israel). Biliverdin (CAS registry number 856699-18-8) purity >98% was purchased from Cayman chemical company (Ann Arbor, MI, USA). Sodium phosphate dibasic, sodium phosphate monobasic, sodium citrate dihydrate, and Tris (hydroxymethyl) aminomethane were purchased from Spectrum Chemical (New Brunswick, Canada). Hydrochloric acid, sodium hydroxide, citric acid, methanol absolute CP, ethanol absolute AR, and dichloromethane CP were purchased from Bio-lab (Jerusalem, Israel). Ammonium persulfate was purchased from Sigma Aldrich (St. Louis, MO, USA). HPLC grade acetonitrile was purchased from J.T Baker (Gilwice, Poland). HPLC grade water was purchased from Marcon (Giliwice, Poland).
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3

Modulating Hepatitis A Virus Infection

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The fetal rhesus kidney (FRhK-4) cell is a HAV-permissive cell line derived from the rhesus monkey. Dulbecco’s modified Eagle’s medium (DMEM) containing 4% heat-inactivated fetal bovine serum (FBS, Gibco, Campinas, Brazil) and antibiotic-antimycotic reagent (Gibco, Campinas, Brazil) was used to maintain this cell line under a 5% CO2 atmosphere at 37 °C.
The HAV strain HM-175/18f, clone B (VR-1402) was obtained from the American Type Culture Collection. Ten genomic equivalents (GE) copies of the HAV per cell were used to inoculate FRhK-4. Cells inoculated with the virus were maintained in DMEM supplemented with 4% heat-inactivated FBS and antibiotic–antimycotic reagent.
We purchased hemin, cobalt protoporphyrin IX (CoPP-9), andrographolide, zinc protoporphyrin IX (ZnPP-9), iron (III) chloride (FeCl3), and carbon monoxide-releasing molecule (CORM-3) from Sigma-Aldrich (St. Louis, MO, USA). Biliverdin was purchased from Cayman Chemical (Ann Arbor, MI, USA).
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SARS-CoV-2 Infection of Vero76 Cells

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Vero76 cells were obtained from the Korean Cell Line Bank and maintained in Dulbecco’s modified Eagle’s medium (DMEM) supplemented with 10% heat-inactivated fetal bovine serum (FBS, Gibco) in an atmosphere with 5% CO2 at 37 °C. The S strain of SARS-CoV-2 (NCCP43326) was obtained from the National Culture Collection for Pathogens. Vero76 cells were infected at a 0.001 multiplicity of infection of NCCP43326. The cells inoculated with the virus were maintained in DMEM supplemented with 2% FBS. Hemin, FeCl3, CORM, andrographolide, CoPP-9, and ZnPP-9 were purchased from Sigma-Aldrich, and biliverdin was purchased from Cayman Chemical Company.
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5

Visualizing Receptor Dynamics in Live Cells

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Prior live-cell imaging, 24 h post-transfection, Cos-7 or HUVEC cells grown on 25 mm #1.5H glass coverslips (Thorlabs, CG15XH1) were incubated for at least 30 min in serum-free FluoroBrite DMEM media (Gibco, A1896701) supplemented with 5 μM biliverdin (co-factor for iRFP713; Cayman Chemical, 1925710). Time-lapse TIRF imaging was performed following stimulation with hEGF (100 ng/ml21 (link); Millipore Sigma, E9644-.2MG) for Cos-7 cells, or recombinant hVEGF 165 (50 ng/ml60 (link); Fischer Scientific, 293VE010CF) for HUVECs. Each cell was imaged simultaneously with TIRF 488 and TIRF 647, for 5 min with 200 ms exposure time and 100 ms delay between frames. Three to four cells were imaged per ligand stimulation.
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