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8 protocols using d f medium

1

Cell Line Cultivation Protocols

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The following cell lines were used in this study: HEK293T (a human embryonic kidney cell line stably expressing the SV40 large T antigen; RIKEN BioResource Center, Tsukuba, Japan), MCF-10A (a non-tumorigenic human breast epithelial cell line; ATCC, Rockville, MD), MCF-7 (a human breast cancer cell line; ATCC), SK-BR-3 (a human breast cancer cell line; ATCC), YMB-1-E (a human breast cancer cell line; JCRB Cell Bank, Tokyo), and MDA-MB-231 (a human breast cancer cell line; ATCC). MCF-10A cells were cultured in DMEM/Ham's F-12 (D/F) medium (Thermo Fisher Scientific, Waltham, MA) supplemented with 100 ng/ml cholera toxin, 20 ng/ml epidermal growth factor (EGF), 0.01 mg/ml insulin, 500 ng/ml hydrocortisone and 5% FBS (Intergen, Purchase, NY). HEK293T, MCF-7, SK-BR-3, YMB-1-E and MDA-MB-231 cells were all cultivated in D/F medium (Thermo Fisher Scientific) supplemented with 10% FBS (Intergen).
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2

Culturing Invasive Melanoma Cell Lines

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B16-BL6 cells (a highly invasive variant of the mouse malignant melanoma B16 cell line; a kind gift from Dr. Isaiah J. Fidler of the MD Anderson Cancer Center, Houston, TX, USA) were cultured in D/F medium (Thermo Fisher Scientific, Waltham, MA, USA) supplemented with 10% FBS in a humidified incubator. A375 cells (a human malignant melanoma cell line; ATCC, Rockville, MD, USA) were also used in this study. A375 cells were cultured with RPMI medium (Thermo Fisher Scientific) supplemented with 10% FBS. All cultures were checked for mycoplasma by using both a mycoplasma detection kit (Thermo Fisher Scientific) and Hoechst 33,342 staining at regular intervals.
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Cell Culture of Transformed Human Cell Lines

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The cell lines used were as follows: HEK293T (a human embryonic kidney cell line stably expressing the SV40 large T antigen; RIKEN BioResource Center, Tsukuba, Japan) and A549 (a human lung adenocarcinoma cell line with KRAS-mutant [G12S]; ATCC, Rockville, MD). These cells were all cultivated in D/F medium (ThermoFisher Scientific, Waltham, MA) supplemented with 10% fetal bovine serum (FBS).
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4

Characterizing Cell Lines for Research

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HEK293T cells (embryonic kidney cells stably expressing the SV40 large T antigen) and PK-8 cells (pancreatic carcinoma cells) were obtained from RIKEN BioResource Center (Tsukuba, Japan). A-431 cells (epidermoid carcinoma cells) and pancreatic cancer cell lines (PL45, AsPC-1, PANC-1, and BxPC-3) were obtained from ATCC (Rockville, MD, USA). Wild-type (WT) and RAGE−/− mouse embryonic fibroblasts (MEFs) were provided by Professor Yasuhiko Yamamoto (Kanazawa University, Kanazawa, Japan). MyD88−/− mouse fibroblasts were isolated from the resected lung of an MyD88−/− mouse (Oriental BioService, Kyoto, Japan). To stabilize the cell phenotype and avoid cellular senescence, the prepared primary mouse fibroblasts (WT, RAGE−/−, and MyD88−/−) were all immortalized in an autonomous manner through repeated passaging in cell culture. These human and mouse cells were all cultivated in D/F medium (Thermo Fisher Scientific, Waltham, MA, USA) supplemented with 10% FBS.
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5

Diverse Cell Lines for Biomedical Research

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HEK293T cells (embryonic kidney cells stably expressing the SV40 large T antigen) and PK-8 cells (pancreatic carcinoma cells) were obtained from RIKEN BioResource Center (Tsukuba, Japan). Another human pancreatic cancer cell line, PANC-1, was obtained from ATCC (Manassas, VA, USA). Normal human OUMS-24 fibroblasts were established by Dr. Masayoshi Namba20 (link). Wild-type (WT) and RAGE−/− mouse embryonic fibroblasts (MEFs) were provided by Professor Yasuhiko Yamamoto (Kanazawa University, Kanazawa, Japan). To stabilize the cell phenotype and avoid cellular senescence, the prepared primary mouse fibroblasts (WT and RAGE−/−) were all immortalized in an autonomous manner through repeated passaging in cell culture21 . These human and mouse cells were all cultivated in D/F medium (Thermo Fisher Scientific, Waltham, MA, USA) supplemented with 10% FBS.
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6

Cultivation of Highly Invasive B16-BL6 Melanoma Cells

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B16-BL6 cells (a highly invasive variant of the mouse malignant melanoma B16 cell line; kind gift from Dr. Isaiah J. Fidler, M. D. Anderson Cancer Center, Houston, TX) were cultivated in D/F medium (Thermo Fisher Scientific, Waltham, MA) supplemented with 10% FBS in a humidified incubator. B16-BL6 cell culture was checked for mycoplasma by using a mycoplasma detection kit (Thermo Fisher Scientific) and Hoechst 33342 staining at regular intervals of time.
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7

Cultivation of Common Cell Lines

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The following human cell lines were used: HEK293 (embryonic kidney cell line; ATCC, Rockville, MD), MCF7 (mammary gland adenocarcinoma cell line; ATCC), PC-3 (prostate adenocarcinoma cell line; ATCC), HeLa (cervix adenocarcinoma cell line; ATCC), HepG2 (hepatocellular carcinoma cell line; ATCC), and KPK-1 (renal clear cell carcinoma cell line; Clonetics, San Diego, California). These cell lines were cultivated in D/F medium (Invitrogen, Carlsbad, CA) supplemented with 10 % FBS.
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8

Melanoma Cell Lines and Inhibitors

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The following two human melanoma cell lines established from the same patient were used: WM-115 (derived from the primary tumor; ATCC, Rockville, MD, USA) and WM-266-4 (derived from a metastatic site; ATCC). These cell lines were cultivated in D/F medium (Invitrogen, Carlsbad, CA, USA) supplemented with 10% fetal bovine serum (FBS; Intergen, Purchase, NY, USA). Talniflumate, a novel and specific inhibitor of GCNT37 (link), and cycloheximide, an inhibitor of protein translation, were purchased from commercial sources, Tokyo Chemical Industry (Tokyo, Japan) and Sigma-Aldrich (St. Louis, MO, USA), respectively.
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