The largest database of trusted experimental protocols

16 protocols using ab84593

1

Western Blot Analysis of GATA4 in mESC

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cell lysates were collected from undifferentiated D3G4 mESC lines in RIPA lysis buffer supplemented with protease inhibitors (Roche). Equal amounts of protein were loaded on a 10% polyacrylamide gel and after electrophoresis, were transferred by semi-dry transfer onto a PVDF membrane (Millipore). The membrane was washed in Tris-buffered saline (TBS) (20 mM Tris, 0.5 M NaCl, pH 7.5), blocked for 1 h at room temperature in TBS-T (0.5% [vol/vol] Tween 20 in TBS) supplemented with 10% (vol/vol) nonfat dry milk, and incubated overnight at 4°C with a 1:100 dilution of anti-GATA4 antibody ab84593 (Abcam) in blocking buffer. The following day, the membrane was washed 3 times for 10 min each in TBS-T, incubated with a 1:10,000 dilution of horseradish peroxidase-conjugated anti-mouse secondary antibody (RABHRP1, Sigma) diluted in blocking buffer for 1 h at room temperature, and developed using SuperSignal West Dura Chemiluminescent Substrate (Thermo Scientific).
+ Open protocol
+ Expand
2

Protein Expression Analysis Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
The primary antibodies were rabbit polyclonal to GATA4 (Abcam, US; ab84593), rabbit polyclonal to ETS1 (Abcam, US; ab26096), rabbit polyclonal to Histone H3 (trimethyl K4)-ChIP Grade (Abcam, US; ab8580), mouse anti-human MLL antibody (Santa Cruz Biotechnology, US; sc-374392) and mouse Anti-β-actin antibody (Sigma, Germany; A1978). Corresponding species-specific horseradish-peroxidase (HRP) labelled secondary antibodies (Pierce, US) were used.
+ Open protocol
+ Expand
3

Immunocytochemical Analysis of Pluripotency and Lineage Markers

Check if the same lab product or an alternative is used in the 5 most similar protocols
For immunocytochemistry, cells were fixed with 4% paraformaldehyde for 20 min at 4 °C. After washing with PBS, the cells were treated with 0.3% Triton X-100 in PBS for 10 min and blocked with PBS containing 3% bovine serum albumin (Bovogen, BSAS0.1) for 1 h at 25 °C. The cells were then treated with primary antibodies at the following concentrations: OCT4 (1:500, Santa Cruz Biotechnology, Dallas, TX, USA, SC-5279), NANOG (1:500, Abcam, Cambridge, UK, ab80892), EOMES (1:500, Abcam, ab23345), GATA4 (1:200, Abcam, ab84593), tubulin beta III isoform (TUJ1; 1:500, Millipore, Burlington, MA, USA, MAB1637), smooth muscle actin (SMA; 1:500, Abcam, ab7817), SOX17 (1:500, R&D Systems, AF1924), and CDX2 (1:1250, Abcam, ab76541). The following day, the primary antibodies were removed and the cells washed thrice with PBS for 10 min. Finally, the cells were labeled with fluorescence-conjugated secondary antibodies to detect the primary antibodies at the following concentrations: Alexa Fluor 488 (1:500) and Alexa Fluor 568 (1:500). Lastly, they were treated with DAPI or Hoechst in 0.3% Triton X-100 in PBS for 3 min at room temperature and washed.
+ Open protocol
+ Expand
4

Protein Extraction and Western Blot

Check if the same lab product or an alternative is used in the 5 most similar protocols
To extract proteins, hearts were washed with cold PBS homogenized, and then cocktails of RIPA, protease, and phosphatase inhibitors (ratio 100:1:1) were added. Protein concentrations were standardized before being electrophoresed on 10–12% gels and transferred to a 0.45 m PVDF membrane (Millipore Immobilon®-P; IPVH08100). Membranes were blocked in TBST with 2% BSA, and proteins of interest were blotted with the antibodies listed here: Glut1 (E4S6I) (Rabbit mAb #73015; CD36 (NB400-144) Novus Biologicals; 1:2000); Cleavage Caspase 3 (Asp175) (D3E9); Cell Signaling Technology; #9579 Rabit mAb;1:1000), CD73 (Abcam; Ab175396; 1:1000), anti-GATA4 (Abcam; ab84593; 1:1000), TNAP (ALPL) Rabbit mAb (A0514); PAP (PSAP) Rabbit mAb (A21195); GAPDH (Proteintech; 10494–1-AP; 1:1000) and HRP-conjugated Goat Anti-Rabbit IgG(H + L) (Proteintech; SA00001-2; 1:1000). Enhanced chemiluminescence (Tanon, China) was used to visualize the membranes.
+ Open protocol
+ Expand
5

Immunohistochemical Staining of GATA4

Check if the same lab product or an alternative is used in the 5 most similar protocols
Immunohistochemical staining for GATA4 expression was performed as previously described (13 (link),14 (link)), using a primary antibody against GATA4 (ab84593; 1:100; Abcam). The endothelial layer of the thoracic aorta was sliced into 6–8 µm thick sections. Primary antibodies were detected using a HRP conjugated goat anti-rabbit secondary antibody was from (ab6721; 1:2,000; Abcam). Positive expression was assessed by determining the % of positive GATA4 staining in the entire visual field.
+ Open protocol
+ Expand
6

Signaling Pathways Regulating Endothelin

Check if the same lab product or an alternative is used in the 5 most similar protocols
Endothelin receptor type A (ETRA) antagonist BQ123 and endothelin receptor type B (ETRB) antagonist BQ788 were purchased from Sigma (St. Louis, MO, USA). ET-1 (human, porcine) was purchased from Tocris Bioscience (Minneapolis, MN, USA). The NOX4 inhibitor GLX351322, secreted phospholipase (sPLA2) inhibitor varespladib, cytosolic PLA2α (cPLA2α) inhibitor CAY10650, ROS inhibitor N-Acetyl-D-cysteine (NAC), Src antagonist Src inhibitor 1, extracellular signal-regulated kinase (ERK) antagonist PD98059, and protein kinase B (Akt) antagonist LY294002 were purchased from Med Chem Express (Monmouth Junction, NJ, USA). Anti-NOX4 and anti-GATA4 antibodies were obtained from Abcam (ab133303, ab85163, ab117529, and ab84593, respectively; Cambridge, UK). The anti-Src antibody was from Millipore (04-889; Burlington, MA, USA). Anti-NOX2 antibody was obtained from Bioss (bs-3889R; Beijing, China). Anti-Akt, phospho-Akt (S473), and β-actin antibodies were acquired from Bioworld Technology (BS1008, BS4006, and AP0060, respectively; Nan Jing, China). Anti-ERK1/2, phospho-ERK1/2 (Thr202/Tyr204), cPLA2, and phosho-cPLA2 (Ser505) antibodies were obtained from Affinity (AF0155, AF1015, AF6329, and AF3329, respectively; Chang Zhou, China).
+ Open protocol
+ Expand
7

Protein Expression Analysis in Cardiac Tissue

Check if the same lab product or an alternative is used in the 5 most similar protocols
Apical myocardia harvested from four to six hearts per treatment group were homogenized in a lysis buffer containing phosphatase and proteinase cocktail inhibitor, in a ratio of 100:1:1, respectively. Lysates of normalized concentrations treated with reducing agents were denatured at 100°C for 10 min and separated on SDS-PAGE gels. The transferred protein bands were blocked and immunoblotted overnight in the following primary antibodies: β1AR (ab3442; Abcam), β2AR (ab182136; Abcam), MEF2 (ab64644; Abcam), GRK5 (ab64943; Abcam) GATA4 (ab84593; Abcam), NFAT (ab25916; Abcam), AC5 (PAC-501AP; FabGennix), AC6 (PAC-601AP; FabGennix), AC7 (PAC-701AP; FabGennix), ANP (sc-515701; Santa Cruz Biotechnology), BNP (sc-271185; Santa Cruz Biotechnology), GRK2 (sc-13143; Santa Cruz Biotechnology), pNF-κB (3033T; Cell Signaling Technology), NF-κB (8242T; Cell Signaling Technology), Cleaved Caspase-3 (9661T; Cell Signaling Technology), Collagen Type I (14695-1-AP, Proteintech), Collagen Type III (13548-1-AP, Proteintech), and GAPDH (10494-1-AP; Proteintech). Immunoblots were performed in triplicates and normalized with their respective loading controls.
+ Open protocol
+ Expand
8

Western Blot Analysis of GATA4 in mESC

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cell lysates were collected from undifferentiated D3G4 mESC lines in RIPA lysis buffer supplemented with protease inhibitors (Roche). Equal amounts of protein were loaded on a 10% polyacrylamide gel and after electrophoresis, were transferred by semi-dry transfer onto a PVDF membrane (Millipore). The membrane was washed in Tris-buffered saline (TBS) (20 mM Tris, 0.5 M NaCl, pH 7.5), blocked for 1 h at room temperature in TBS-T (0.5% [vol/vol] Tween 20 in TBS) supplemented with 10% (vol/vol) nonfat dry milk, and incubated overnight at 4°C with a 1:100 dilution of anti-GATA4 antibody ab84593 (Abcam) in blocking buffer. The following day, the membrane was washed 3 times for 10 min each in TBS-T, incubated with a 1:10,000 dilution of horseradish peroxidase-conjugated anti-mouse secondary antibody (RABHRP1, Sigma) diluted in blocking buffer for 1 h at room temperature, and developed using SuperSignal West Dura Chemiluminescent Substrate (Thermo Scientific).
+ Open protocol
+ Expand
9

Histological and Immunohistochemical Analysis of Testis and Epididymis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Tissues were harvested at necropsy and fixed overnight in 4% paraformaldehyde (PFA) in PBS. Subsequently, 5 μm-thick testis and epididymal sections from infected and uninfected mice were processed for histology by H & E staining. For immunohistochemistry, the tissue sections were incubated with mouse primary monoclonal anti-CD45 (610266; BD Biosciences), anti-ETV5 (ab102010; Abcam), and anti-GATA4 (ab84593; Abcam), rabbit polyclonal anti-Lin28a (3978S, Cell Signaling), rat polyclonal anti-TRA98 (ab82527; Abcam), rat polyclonal anti-F4/80 (ab6640; Abcam), or goat polyclonal anti-3β-HSD antibodies (SC-30820, Santa Cruz Biotechnology). After washing, slides were stained with Alexa Fluor 488- or, Alexa Fluor 546-conjugated goat anti-rabbit, goat anti-mouse, or donkey anti-goat (1:1000; A11008, A11081, A11030, or A11056; ThermoFisher Scientific) secondary antibodies for 1 h, and mounted with prolong gold anti-fade mount containing the nuclear counter stain, DAPI (ThermoFisher Scientific). Immunostaining was detected by confocal microscopy (Leica SPE100, Germany).
+ Open protocol
+ Expand
10

Immunophenotyping of Embryonic Stem Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
EBs were digested into single cells by incubating with 0.25% trypsin (Invitrogen) plus 0.25% collagenase II (Invitrogen, 1:1) for 30 min at 37°C. The isolated single cells (1 × 106) were then immunostained with the antibodies listed below in PBS with 0.2% Tween 20. After cell aggregates were removed, single cells were analyzed on the BS LSRII flow cytometer (BD Bioscience) and analyzed using CellQuest software (BD Biosciences). Polyclonal rabbit IgG isotype control (Abcam, ab171870) was included in all experiments. The following antibodies were used: anti-Tbx5 (Abcam, ab101227), anti-GATA4 (Abcam, ab84593), and Alexa Fluor 488 donkey anti-rabbit IgG (H + L) (Invitrogen, A-21206).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!