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Af886

Manufactured by R&D Systems
Sourced in Germany

AF886 is a laboratory equipment product from R&D Systems. It is designed for specific applications, but a detailed description cannot be provided while maintaining an unbiased and factual approach. The core function of this product is not available.

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5 protocols using af886

1

Survivin Immunofluorescence Analysis of Tumor Sections

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Survivin immunofluorescence analysis was performed on frozen tumor sections. Tumor sections were fixed with 4% of paraformaldehyde for 20 min at room temperature. After washing twice with PBS, slides were immersed in 0.5 % of H2O2/PBS solution at room temperature for 10 min to block the endogenous peroxidase activity. The slides were rinsed in PBS solution with two changes, 5 min each, and then, incubated in 1% of Triton X-100 solution for 10 min. Enzymatic activity and non-specific binding sites were blocked by incubating the slides in 10% of FBS for 1 hour at room temperature in a humidified chamber. Subsequently, replicate sections were incubated at 4°C overnight with a primary rabbit anti-survivin antibody (AF886; R&D System) at the final concentration of 10 µg/ml. Thorough rinsing was followed by the incubation with the red-fluorescent dye-labeled anti-rabbit IgG (10 µg/ml; T6391; Life Technologies) for 1 hour. Negative controls for each tissue section were performed leaving out the primary antibody. Finally, the nuclei were stained with Hoechst 33342 (5 µM) for 15 min at room temperature and the stained sections were observed and photographed using a Nikon Eclipse E400 microscope and a Spot Advanced software (Spot Imaging). To quantify the survivin protein levels from the images, the cell fluorescent intensity was measured with ImageJ.
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2

Immunohistochemical Analysis of COX-2 and Survivin

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IHQ was performed as previously described [11 (link)]. Anti-COX-2 (Cell signaling Technology #12282; 1:600, Danvers, CO, USA) or anti-survivin antibodies (R&D Systems #AF886; 1:500, Minneapolis, MS, USA) were incubated at 4 °C overnight. For each slide, a negative control incubated only with 2% phosphate buffered saline-bovine serum albumin (PBS-BSA) without the primary antibody was included. Five to ten microphotographs were obtained with each sample. Immunostaining was semi-quantified by integrated optical density (IOD) analysis of positive cells using the program Image-ProPlus 6.2 (Media Cybernetics, Rockville, MD, USA).
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3

Protein Expression Analysis by Western Blotting

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Whole cell lysates were further processed by SDS-Page followed by Western blotting, as previously described [15 (link)]. Immunodetection with primary antibodies against human Survivin (AF886, R&D Systems, Wiesbaden-Nordenstadt, Germany), Bcl-2 (610539, BD Transduction Laboratories) Beclin1 (ab114071), Map1lc3b (ab51520) and Sqstm1 (ab96706) (AbCam), DRAM1 (PRS4035 Sigma-Aldrich Saint Louis MO USA), ATF4 (ab50546, AbCam) and β-actin (A5441) (Sigma-Aldrich) was performed. Bound secondary HRP-conjugated anti-mouse (A9917) and anti-rabbit (A0545) antibodies (Sigma-Aldrich) were detected by incubating the immunoblots with Super Signal West Pico Chemiluminescent Substrate (#34077, Pierce, Thermo Fisher Scientific, Darmstadt Germany). The luminescent reactivity was then measured using Fusion image capture and further quantified with Bio1D analysis system (PEQLAB Biotechnologie GmbH). The blotted nitrocellulose membranes (Amersham Protran Premium 0.2 μm NC Cat. N. 10600009 Ge Healthcare Life Science, Freiburg Germany) were up to four times stripped with Stripping Buffer (Restore Plus Western Blot Stripping Buffer Cat. N. 46430 Thermo Scientific) as suggested by the company and reprobed in order to detect other proteins. At last, anti-β-actin was used to control equal loading and protein quality.
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4

Immunoblotting Analysis of Cell Signaling

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Total cells lysates were prepared and analyzed by immunoblotting as described previously [40 (link)]. Membranes were incubated with primary antibodies including polyclonal anti-Survivin (AF886, R&D Systems), monoclonal anti c-myc (R950–25, Invitrogen), monoclonal rabbit anti-p21waf/cip (#2947, Cell Signaling), polyclonal goat anti-p53 (AF1355, R&D Systems), monoclonal rabbit anti-p53 S15 (ab1431, Abcam), monoclonal mouse anti-actin (A2228, Sigma), monoclonal rabbit anti-ATM S1981 (#2152–1, Epitomics), polyclonal rabbit anti-ATM (PC116, Merck, Darmstadt, Germany), monoclonal rabbit anti-CHK2 T68 (#2661, Cell Signaling), polyclonal rabbit anti-Cyclin D1 (sc-753, Santa Cruz), polyclonal rabbit anti-Cyclin E (sc-247, Santa Cruz), and monoclonal mouse anti-γH2AX (05–636, Millipore). Bound antibodies were detected using appropriate secondary antibodies conjugated with HRP (Dako, Hamburg, Germany) as described previously [40 (link)].
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5

Protein Expression Analysis Protocols

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The primary antibody to survivin (AF886; R&D Systems, Wiesbaden, Germany) was used at a dilution of 1:400, to grp-78 (ab21685; Abcam, Cambridge, UK) at a dilution of 1:200, to calnexin (ab75801; Abcam) at a dilution of 1:1500 and to p-SMAD2/3 (SC-11769; Santa Cruz) at a dilution of 1:5000. As a loading control tubulin, vinculin or amido black staining were used. The antibodies to tubulin or vinculin (both Sigma-Aldrich, Munich, Germany) were used at dilutions of 1:10000 (tubulin) or 1:5000 (vinculin).
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