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31 protocols using chir99021

1

Differentiation of hiPS Cells into Progenitors

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hiPS cells were seeded onto flasks coated with Matrigel at a density of 0.5–1 × 104 cells per cm2 in primed hiPS cell medium (KSR/FGF2). After 24 h, medium was changed to DMEM/F12-based medium supplemented with ITS (insulin + transferrin + selenium; Sigma-Aldrich) with 1% penicillin and streptomycin (Gibco, ThermoFisher Scientific), 3 µM CHIR99021 (Miltenyi Biotec), 0.5 µM LDN193189 (Tocris Bioscience, Bio-Techne) for 3 days. On days 4–6, the medium was changed to DMEM/F12-based medium supplemented with ITS and 3 µM CHIR99021, 20 ng ml−1 FGF2 (Miltenyi Biotec), 0.5 µM LDN193189. On days 7–8, the medium was changed to DMEM/F12-based medium supplemented with 20 ng ml−1 FGF2, 0.5 µM LDN193189, 2 ng ml−1 IGF1 (Peprotech). On days 9–30, the medium was changed to DMEM/F12-based medium supplemented with 15% knockout serum replacement (Gibco, ThermoFisher Scientific), 1% penicillin and streptomycin, 0.05 mg ml−1 BSA (Sigma-Aldrich), 2 ng ml−1 IGF1.
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2

Differentiation of hiPS Cells into Progenitors

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hiPS cells were seeded onto flasks coated with Matrigel at a density of 0.5–1 × 104 cells per cm2 in primed hiPS cell medium (KSR/FGF2). After 24 h, medium was changed to DMEM/F12-based medium supplemented with ITS (insulin + transferrin + selenium; Sigma-Aldrich) with 1% penicillin and streptomycin (Gibco, ThermoFisher Scientific), 3 µM CHIR99021 (Miltenyi Biotec), 0.5 µM LDN193189 (Tocris Bioscience, Bio-Techne) for 3 days. On days 4–6, the medium was changed to DMEM/F12-based medium supplemented with ITS and 3 µM CHIR99021, 20 ng ml−1 FGF2 (Miltenyi Biotec), 0.5 µM LDN193189. On days 7–8, the medium was changed to DMEM/F12-based medium supplemented with 20 ng ml−1 FGF2, 0.5 µM LDN193189, 2 ng ml−1 IGF1 (Peprotech). On days 9–30, the medium was changed to DMEM/F12-based medium supplemented with 15% knockout serum replacement (Gibco, ThermoFisher Scientific), 1% penicillin and streptomycin, 0.05 mg ml−1 BSA (Sigma-Aldrich), 2 ng ml−1 IGF1.
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3

Expansion of Embryonic Stem Cells with ABCL

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Advanced embryonic stem cells and Bdh2-knockout ASCs were cultured in ABCL culture medium comprised Activin A (20 ng/mL, R & D systems), BMP4 (50 ng/mL, R & D systems), CHIR99021 (3 μM, Miltenyi Biotec) and leukemia inhibitory factor (1000 U ml–1, Millipore) added into basic N2B27 medium including 50% Neurobasal (Gibco), 50% DMEM/F12 (Gibco), 2 mM GlutaMax (Gibco), 1 × non-essential amino acids (NEAA, Gibco), 1 × Penicillin/Streptomycin (Gibco), 0.1 mM β-mercaptoethanol (Gibco), 0.005% (25 mg) BSA (Gibco) supplemented with 0.5 × N2 (Gibco) and 0.5 × B27 (Gibco). ESCs and Bdh2-knockout ESCs were cultured in 2i/L medium consisting of basic N2B27 medium supplemented with PD0325901 (1 μM, Miltenyi Biotec), CHIR99021 (3 μM, Miltenyi Biotec) and leukemia inhibitory factor (1000 U mL–1, Millipore). Green fluorescence indicated that GFP expression of the reporter was under the control of Oct4 promoter and distal enhancer. The colonies could stably passage by Accutase (Life technology) regularly at every 2–3 days. All using plates were coated by fibronectin (1 mg/mL in PBS, Millipore) at least 0.5 h before use.
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4

Maintenance of Mouse Embryonic Stem Cells

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Mouse ESCs were obtained as previously reported
39 (link),
40 (link),
41 (link) and maintained in 2i/L medium (1000 IU/mL LIF [Millipore, ESG1107], 1 μM PD0325901 [Miltenyi Biotec, 130–103‐923] and 3 μM CHIR99021 [Miltenyi Biotec, 130–103‐926] in N2B27 basal medium) on fibronectin‐coated (Millipore, FC010) plates. N2B27 basal medium contained one volume of DMEM/F12 (Gibco, 11,320–033) combined with one volume of neurobasal medium (Gibco, 21,103–049) supplemented with 0.5% N2 supplement (Gibco, 17,502–048), 1% B27 supplement (Gibco, 17,504–044), 2 mM GlutaMAX‐l (Gibco, 35,050–061), 1% MEM NEAA (Gibco, 11,140–050), 1% penicillin/streptomycin (Gibco, 15,140–122), 50 mg/L bovine serum albumin (Gibco, 15,260–037) and 110 μM β‐mercaptoethanol (Sigma, M3148).
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5

Culturing Pluripotent and Neural Stem Cells

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ESCs were grown on gelatin-coated plates in 2i media: 1:1 Neurobasal and DMEM/F12, supplemented with 0.5X N2 (Thermo Scientific, #17502048), 0.5x B27 (Thermo Scientific, #17504044), 0.05% BSA (Thermo Scientific, #15260037), 1mM PD0325901 (Stemcell Technologies, #72182), 3µM CHIR99021 (Miltenyi Biotec, #130-103-926), 2mM Lglutamine, 0.15mM monothioglycerol, 100U/ml LIF). NSCs were grown on laminin-coated (Sigma Aldrich, #L2020) plates in DMEM/F12 medium supplemented with 2mM L-glutamine, 0.5x N2, B27, glucose, BSA, HEPES and 10ng/ml of both mouse EGF (Peprotech, #315-09)
and human FGF-2 (Peprotech, #100-18B). MEFs were cultured in Dulbecco's Modified Eagle's Medium (DMEM) supplemented with 10% fetal bovine serum (FBS).
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6

Efficient MN Differentiation from iPSCs

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iPSCs were maintained on Geltrex (Life Technologies) with Essential 8 Medium media (Life Technologies), and passaged using EDTA (Life Technologies, 0.5mM). All cell cultures were maintained at 37°C and 5% carbon dioxide. MN differentiation was performed using an adapted version of a previously published protocol (Hall et al., 2017). Briefly, iPSCs were first differentiated from neuroepithelium by plating to 100% confluency in chemically defined medium consisting of DMEM/F12 Glutamax, Neurobasal, L- Glutamine, N2 supplement, non-essential amino acids, B27 supplement, β-mercaptoethanol (all from Life Technologies) and insulin (Sigma). Treatment with small molecules from day 0 to day 7 was as follows: 1 μM Dorsomorphin (Millipore), 2 μM SB431542 (Tocris Bioscience), and 3 μM CHIR99021 (Miltenyi Biotec). On day 8, the neuroepithelial layer was enzymatically dissociated using dispase (GIBCO, 1 mg/mL), plated onto laminin coated plates and next patterned for 7 days with 0.5 μM retinoic acid and 1μM Purmorphamine. At day 14, MN precursors were treated with 0.1μM Purmorphamine for a further 4 days before being terminally differentiated in 0.1 μM Compound E (Enzo Life Sciences) to promote cell cycle exit.
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7

Generation of Astrocytes from hiPSCs

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hiPSCs were maintained using standard protocols and were differentiated into astrocytes as described previously, generating highly enriched (>90%) populations of astrocytes (Supplementary Figure S1A) (8 (link),11 (link),48–51 (link)). hiPSCs were maintained on Geltrex (Life Technologies) with serum-free Essential 8 Medium media (Life Technologies), and passaged using EDTA. After neural conversion (7 days in a chemically defined medium containing 1 μM Dorsomorphin (Millipore), 2 μM SB431542 (Tocris Bioscience) and 3.3 μM CHIR99021 (Miltenyi Biotec), neural precursors were patterned for 7 days with 0.5 μM retinoic acid and 1 μM purmorphamine, followed by a 4-day treatment with 0.1 μM purmorphamine. After a propagation phase (60–120 days) with 10 ng/ml FGF-2 (Peprotech), astrocytes were terminally differentiated in presence of BMP4 (10 ng/ml, R&D) and LIF (10 ng/ml, Sigma-Aldrich) for 30 days. Informed consent was obtained from all patients and healthy controls in this study. Experimental protocols were all carried out according to approved regulations and guidelines by UCLH’s National Hospital for Neurology and Neurosurgery and UCL’s Institute of Neurology joint research ethics committee (09/0272).
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8

INS-1E Cell Culture and Treatments

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We seeded 40,000 INS-1E (AddexBio, San Diego, CA, USA) per cm2 (flasks) and cultivated these cells in medium containing RPMI 1640 with glutamine (Life Technologies, Carlsbad, CA, USA), 1 mmol/l sodium pyruvate (Life Technologies), 50 μmol/l β-mercaptoethanol (Life Technologies), 10 mmol/l HEPES (Life Technologies), 10% fetal bovine serum (FBS) (Biochrom, Berlin, Germany), 100 IU/ml penicillin and 100 μg/ml streptomycin (Life Technologies). After 4 days, INS-1E were detached using 0.05% trypsin (Life Technologies), seeded at 100,000 cells per cm2 (24- or 96-well plate) and cultured in the aforementioned medium for another 3 days. Then, cells were fasted for FBS for 4h and treated with 0.1, 1 or 5 μg/ml recombinant Sfrp5 (R&D Systems, Wiesbaden, Germany) for 24h. INS-1E cells were also incubated with 0.2 ng/ml interleukin (IL)-1β (R&D Systems) as positive control for the inhibition of cell viability. Treatment of the cells with 10 μmol/l CHIR99021 (Miltenyi Biotec GmbH, Bergisch Gladbach, Germany) served as positive control of an activated canonical Wnt signalling pathway.
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9

Fibroblast and Induced Pluripotent Stem Cell Media Formulations

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Fibroblast medium: DMEM (ThermoFisher), 10% fetal bovine serum (FBS, Hyclone), 1% non-essential amino acids (ThermoFisher), 1 mM GlutaMAX (ThermoFisher), 1% penicillin-streptomycin (ThermoFisher), 55 μM β-mercaptoethanol (ThermoFisher) and 1 mM sodium pyruvate (ThermoFisher). Naive medium (t2iLGoY)19 (link): 50:50 mixture of DMEM/F12 (ThermoFisher) and neurobasal medium (ThermoFisher), supplemented with 2 mM l-glutamine (ThermoFisher), 0.1 mM β-mercaptoethanol (ThermoFisher), 0.5% N2 supplement (ThermoFisher), 1% B27 supplement (ThermoFisher), 1% penicillin-streptomycin (ThermoFisher), 10 ng ml−1 human leukaemia inhibitory factor (made in-house), 250 μM l-ascorbic acid (Sigma), 10 μg ml−1 recombinant human insulin (Sigma), 1 μM PD0325901 (Miltenyi Biotec), 1 μM CHIR99021 (Miltenyi Biotec), 2.5 μM Gö6983 (Tocris), 10 μM Y-27632 (Abcam). Primed hiPS cell medium (KSR/FGF2): DMEM/F12 (ThermoFisher), 20% knockout serum replacement (KSR) (ThermoFisher), 1 mM GlutaMAX (ThermoFisher), 0.1 mM β-mercaptoethanol (ThermoFisher), 1% non-essential amino acids (ThermoFisher), 50 ng ml−1 recombinant human FGF2 (Miltenyi Biotec), 1% penicillin-streptomycin (ThermoFisher). Primed hiPS cell medium (Essential 8 (E8)): 10 ml of E8 supplement (Gibco) to 500 ml medium basal (Gibco), supplemented with 1% penicillin-streptomycin (Gibco).
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10

Fibroblast and Induced Pluripotent Stem Cell Media Formulations

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Fibroblast medium: DMEM (ThermoFisher), 10% fetal bovine serum (FBS, Hyclone), 1% non-essential amino acids (ThermoFisher), 1 mM GlutaMAX (ThermoFisher), 1% penicillin-streptomycin (ThermoFisher), 55 μM β-mercaptoethanol (ThermoFisher) and 1 mM sodium pyruvate (ThermoFisher). Naive medium (t2iLGoY)19 (link): 50:50 mixture of DMEM/F12 (ThermoFisher) and neurobasal medium (ThermoFisher), supplemented with 2 mM l-glutamine (ThermoFisher), 0.1 mM β-mercaptoethanol (ThermoFisher), 0.5% N2 supplement (ThermoFisher), 1% B27 supplement (ThermoFisher), 1% penicillin-streptomycin (ThermoFisher), 10 ng ml−1 human leukaemia inhibitory factor (made in-house), 250 μM l-ascorbic acid (Sigma), 10 μg ml−1 recombinant human insulin (Sigma), 1 μM PD0325901 (Miltenyi Biotec), 1 μM CHIR99021 (Miltenyi Biotec), 2.5 μM Gö6983 (Tocris), 10 μM Y-27632 (Abcam). Primed hiPS cell medium (KSR/FGF2): DMEM/F12 (ThermoFisher), 20% knockout serum replacement (KSR) (ThermoFisher), 1 mM GlutaMAX (ThermoFisher), 0.1 mM β-mercaptoethanol (ThermoFisher), 1% non-essential amino acids (ThermoFisher), 50 ng ml−1 recombinant human FGF2 (Miltenyi Biotec), 1% penicillin-streptomycin (ThermoFisher). Primed hiPS cell medium (Essential 8 (E8)): 10 ml of E8 supplement (Gibco) to 500 ml medium basal (Gibco), supplemented with 1% penicillin-streptomycin (Gibco).
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