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24 protocols using dea nonoate

1

Characterizing Nitric Oxide Binding in CDO Samples

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The protein samples were treated with EDTA to remove trace metals. They were anaerobically reconstituted and dialyzed with ferrous ammonium sulfate to ensure full iron occupancy. Then, they were incubated with L-cysteine and nitric oxide (•NO), a spin probe of the FeII-center and a structural analogue of the molecular oxygen. The •NO-releasing agent DEA-NONOate (Cayman Chemical Co.) was dissolved into water in the glove box, and the •NO-bound CDO samples were formed by anaerobically soaking the ES-complex with certain volume of DEA-NONOate in the presence of 20 mM L-ascorbic acid for 1 h. The samples were transferred to quartz EPR tubes and slowly frozen in liquid nitrogen. EPR spectra were recorded on a Bruker E560 X-band spectrometer equipped with a cryogen-free 4 K temperature system with an SHQE high-Q resonator at 100 kHz modulation frequency, 0.8 mW microwave power, 0.6 mT modulation amplitude at 20 – 50 K, and an average of four scans for each spectrum.
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2

Preparation and Redox Modulation of NosP Complexes

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NosP complexes are prepared in an anaerobic chamber (COY). Samples were incubated with 10 mM potassium ferricyanide for 10 min to oxidize the heme and then desalted by PD-10 gel filtration (GE) to remove ferricyanide. A 600 mM dithionite solution was prepared anaerobically by dissolving 52 mg of solid dithionite (stored in a desiccator) in 500 uL of oxygen-free tris buffered saline (20 mM Tris, pH 7.5, 100 mM NaCl). The protein was then incubated with 60 mM sodium dithionite for 45 min followed by desalting to remove dithionite. The protein was then exposed to either excess nitric oxide (NO) donor DEA-NONOate (Cayman Chemical) which has a 1/2 life of 16 min at 25°C and desalted to remove DEA and excess DEA-NONOate or was exposed to excess carbon monoxide (CO) gas continually passed through the headspace of a gas-tight reactivial. For CN complexes, ferric protein was incubated in 10 mM potassium cyanide for 40 min. At each stage of preparation, a small amount of sample was saved for UV-Vis spectroscopic analysis (CARY).
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3

Fluorescent Probes and Cell Reagents

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All solvents were of analytical grade and used after appropriate distillation or purification. Other reagents were commercial chemicals and used as received. All aqueous solutions were prepared with Millipore water. 6-Carboxyfluorescein and 2-[2-(6-chloro-hexyloxy)-ethoxy]-ethylammonium hydrochloride were synthesized in accordance to the literature [15 (link), 19 ]. DAF-2DA was prepared in accordance to the literature with minor modifications [10 (link)]. Dimethyl sulfoxide, 4’,6diamidino-2-phenylindole (DAPI), Lipopolysaccharides (LPS), Nω-Nitro-L-arginine methyl ester hydrochloride (L-NAME), xanthine and xanthine oxidase were obtained from Sigma. Recombinant Murine interferon-γ (IFN-γ) was obtained from Peprotech. MitoTracker Red FM was from Invitrogen. DEA NONOate and MAHMA NONOate were purchased from Cayman Chemical Co. Dulbecco’s phosphate-buffered saline (PBS) powder was from Hyclone. Dulbecco’s modified Eagle’s medium (DMEM) and fetal bovine serum (FBS) were from Gibco.
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4

Sildenafil Enhances cGMP Signaling

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Confluent RASMCs were cultured in 12-well dishes and pretreated with 10 µM sildenafil (Sigma-Aldrich) for 45 minutes and then stimulated with the NO donor, diethylammonium (Z)-1-(N,N-diethylamino)diazen-1-ium-1,2-diolate (DEA NONOate; Cayman), for 15 minutes. Baseline measurements were performed after 45-minute treatment with 10 μM sildenafil. Cell samples were lysed in 125 µl of ice-cold 1× cell lysis buffer (Cell Signaling) supplemented with protease and phosphatase inhibitors (Sigma-Aldrich). cGMP production was determined via enzyme-linked immunosorbent assay (ELISA; Cell Signaling). Ten microliters of sample (approximately 5–10 µg of protein) was added to each well and diluted with additional lysis buffer, and exact protein concentration of each sample was quantified using a standard BCA protein assay kit (Thermo Fisher). ELISAs were performed hereafter according to the manufacturer’s protocol.
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5

Vasodilator and Antioxidant Compounds

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L-NIL (hydrochloride) and DEANONOate were purchased from Cayman Chemical (Ann. Harbor, MI). PTIO, SNAP, and Dithiothreitol were from Sigma-Aldrich (St. Louis, MO). Vemurafenib (PLX4032/RG7204) from Selleckchem (Houston, TX). All chemicals were prepared freshly from powdered stock on the day of each experiment. All cell culture reagents were from Invitrogen.
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6

Heme-Nitric Oxide Sensor Activation

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Purified H-NOX was incubated with 20 mM potassium ferricyanide at room temperature for 20 min to generate oxidized Fe(III)-heme. The protein was desalted using a PD-10 column equilibrated in 50 mM HEPES (pH 7.5) and 200 mM NaCl to remove excess potassium ferricyanide. The Fe(III)-H-NOX was exposed to an anaerobic environment using a COY Anaerobic Chamber (Coy Laboratory Products) to deoxygenate the protein. Oxygen-free Fe(III)-H-NOX was treated with 60 mM sodium dithionite (Na2S2O4) at room temperature for 20 min to generate Fe(II) bound heme protein. The protein was again desalted as previously described, but under anaerobic conditions. NO-bound Fe(II)-H-NOX was formed by incubating the protein with the NO donor diethylammonium (Z)-1-(N,N-diethylamino)diazen-1-ium-1,2-diolate (DEA-NONOate, Cayman Chemicals) dissolved in 10 mM sodium hydroxide and followed by desalting. Carbon monoxide(CO)-bound Fe(II)-H-NOX was generated by bubbling CO gas into the protein for 15 min in an airtight vial. Electronic absorption spectra of all complexes were measured on a Cary 100 UV-Vis spectrophotometer equipped with a constant temperature bath set to 25°C.
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7

Generating H-NOX Protein Bound Forms

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Glycerol free H-NOX storage buffer was bubbled with CO or O2 gas (Praxair) for 20 minutes and cycled into the anaerobic glovebag. To generate the CO and O2 bound forms of the protein, ferrous unligated Cs H-NOX protein was diluted approximately 20-fold in either CO or O2 equilibrated buffer, respectively. The protein was concentrated using a 5000 kDa membrane spin concentrator and then re-diluted with the CO or O2 equilibrated buffer, respectively. The NO bound form was generated similarly except the protein was dissolved in a buffer containing DEA-NONOate (Cayman Chemical) to produce NO in situ. UV-Vis spectroscopy confirmed the CO, NO, or O2 bound forms of the protein.
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8

Endothelial Dysfunction Mechanistic Study

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Apocynin was purchased from SAFC (Saint. Louis, MO, USA). 8-Bromoguanosine 3′,5′-cyclic monophosphate, bradykinin, calcium ionophore (A23187), N (G)-nitro-L- arginine methyl ester (L-NAME), ODQ, tetrahydrobiopterin, siRNA against eNOS and N-TER Nanoparticle siRNA Transfection system, and anti-α-tubulin antibody were obtained from Sigma (Saint Louis, MO, USA). Anti-Shc/p66 (pSer36) antibody was purchased from Calbiochem (Darmstadt, Germany). DETA NONOate, DEA NONOate, and KT5823 were purchased from Cayman (Michigan, USA). Oxidized LDL and LDL are bought from Biomedical Technologies (Stoughton, MA, USA). Anti-Shc antibody was purchased from Cell Signaling (Danvers, MA, USA). Anti-eNOS antibody was bought from B&D transduction laboratories (NJ, USA). Anti-rabbit and Anti-mouse second antibodies were bought from GE healthcare (Buckinghamshire, UK).
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9

Vascular Reactivity Assays Using Myograph

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The following compounds were used for myograph studies and purchased from Sigma-Aldrich (St. Louis, MO, USA): (R)-(−)-phenylephrine hydrochloride (PE), acetylcholine chloride (ACh), adenosine 5′ diphosphate sodium salt (ADP), potassium phosphate monobasic, potassium chloride, D-(+)-glucose, magnesium sulfate heptahydrate, sodium chloride, calcium chloride dehydrate, α,ß-methylene adenosine 5′-triphosphate (α,ß-MetATP), guanethidine, Nω-Nitro-L-arginine methyl ester hydrochloride (L-NAME). DEA NONOate and NF449 were purchased from Cayman Chemicals (Ann Arbor, MI, USA), and MRS2500, 2-methylthioadenosine diphosphate trisodium salt (2-MeSADP), and tetrodotoxin citrate from Tocris (Bristol, United Kingdom). All compounds were dissolved in distilled water with the exception of atropine and DEA NONOate which were dissolved in 100% ethanol and further diluted using distilled water.
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10

Nitric Oxide Effect on Red Blood Cell Deformability

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To test the effects of NO on RBC deformability, whole blood from 4 healthy volunteers was incubated with NO donors and agents that could affect nitric oxide synthase, and their deformability was measured via osmotic gradient ektacytometry. Whole blood was drawn from healthy volunteers into vacutubes with sodium heparin (BD, 367871). One milliliter samples were incubated for one hour at room temperature with 10 μM SNP (MP Biomedicals, 152061), 10 μM DEA-NONOate (Cayman, 82100), 1 mM L-NAME (Cayman, 80210) or 3 mM L-arginine (Sigma, A5006) as these concentrations of these compounds were previously shown to have significant effects on RBC deformability19 (link). After one hour the samples were placed on ice and scanned in the ektacytometer.
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