The largest database of trusted experimental protocols

83 protocols using originpro v8

1

Quantitative Analysis of Brain Metabolites

Check if the same lab product or an alternative is used in the 5 most similar protocols
All statistical analyses (t-test and analysis of variance) of the NMR and histological quantifications were performed with Origin Pro v.8. The paired and/or unpaired Student's t-test was used to compare mean values. F-values were calculated and F-values larger than 2.8 (p < 0.05) were considered significant. Kolmogorov-Smirnov normality tests were performed which confirmed that the longitudinal HR-MAS NMR data were normally distributed for a particular age/genotype with a probability ranging from 0.5 to 0.9. A KruskaleWallis 1-way analysis of variance along with rank test was implemented on the NMR data to compare the median of metabolites levels for all group comparisons. This method confirms that samples come from the same population for a particular age, sex, and genotype. Tests for homogeneity of variances between different ages (3, 6, 9, 12, and 18 months) were computed with Origin Pro v. 8. No statistically significant change in variance was observed in particular age for any genotype. Subsequent ManneWhitney tests were used to make pairwise comparisons between different mice groups. Bonferroni correction for multiple comparisons (20 comparison ¼ 4 regions  5 time point) was applied to identify significance of differences among different age groups.
+ Open protocol
+ Expand
2

EAG Response Analysis of Chemical Samples

Check if the same lab product or an alternative is used in the 5 most similar protocols
The EAG data were combined with the digital signal that indicates the opening of the valve and integrated using the software OriginPro v8.1 (OriginLab Corporation, Northampton, USA). Statistical analysis was carried out using R v3.1.2. EAG responses to the 10–0 samples were compared with the response to acetone using Student’s t-test with correction of the significance levels using the Holm-Bonferroni method [16 (link)]. The AI values were compared using a paired t-test in R v3.1.2.
+ Open protocol
+ Expand
3

Evaluating Essential Oils' Metal Chelation and Antioxidant Potential

Check if the same lab product or an alternative is used in the 5 most similar protocols
To evaluate the ability of EOs to chelate transition metals and avoid the generation of free radicals, a ferrous ion chelation assay was used [12 (link)]. The reaction mixture contained 1 mL of 0.125 mM FeSO4 solution and 1 mL of 0.3125 mM ferrozine water solution, as well as 2 mL of serial dilutions of EOs or reference compound dissolved in methanol. The mixtures were kept for 10 min at room temperature (25 °C), and the absorbance was measured at 562 nm. The ability of EOs to chelate metal ions was expressed as the percentage of inhibition and calculated according to Formula (1): %inhibition=AcAtAc100
where At is the absorbance of the sample and Ac is the absorbance of the control sample. The concentration of the tested EOs that reduces 50% of the initial metal ion/free radical concentration, i.e., the EC50 value, was calculated using the dose–response sigmoidal curve, as implemented in OriginPro v8.1 (OriginLab Corporation, Northampton, MA, USA).
+ Open protocol
+ Expand
4

Characterization of GlcNAc-Functionalized Silica Sorbent

Check if the same lab product or an alternative is used in the 5 most similar protocols
All HPLC separations were performed using Waters Alliance 2629 separation module (Milford, MA, USA), connected with an in-line degasser, a quaternary solvent pump, an autosampler, and a thermostated column compartment. A Waters PDA detector (model 2475) was used to record the signals at 254 nm. All the chromatographic separations were carried out by maintaining the column at room temperature. N-Acetylglucosamine functionalized-silica (GlcNAc-silica) slurry was packed in stainless-steel columns using a constant pressure pump from Shandon Southern Products Ltd. (Rincon, Cheshire, UK). Data acquisition was performed using Empower 2 (Build 2154) software (Waters Chromatography), and then the offline chromatographic data were processed using OriginPro v8.5.1 (Origin Lab Corp., Northhampton, MA, USA). Fourier transform infrared (FTIR) analyses were carried out for the characterization of GlcNAc-silica sorbent using attenuated total reflectance mode on a Nicolet IS50 FT-IR instrument from Thermo Scientific Co. (Waltham, MA, USA). Furthermore, the functionalization of silica with surface bound N-acetylglucosamine was assessed via thermogravimetric analysis using a Q-50 thermogravimetric analyzer from TA instruments (New Castle, DE, USA). Approximately 8–10 mg of the samples was heated from 20 °C to 900 °C at a heating rate of 20 °C per min with a 40 mL/min continuous nitrogen gas flow.
+ Open protocol
+ Expand
5

Comparison of Data Analysis Methods

Check if the same lab product or an alternative is used in the 5 most similar protocols
Data were analyzed using one-way ANOVA followed by Dunnett’s test (Origin Pro, v. 8.5.1., MA, USA) and p < 0.05 was chosen to indicate significant difference between data sets.
+ Open protocol
+ Expand
6

Comprehensive Statistical Analysis Methods

Check if the same lab product or an alternative is used in the 5 most similar protocols
All statistical analyses were performed in R version 3.3.1, except electron microscopy data and electrophysiological measurements in EndoC-βH1 cells, which were analyzed using OriginPro v8.5.1. For kinetic data, rates were found to be dependent on substrate concentration, and exponential models were fitted. Enzyme kinetics, electron microscopy, electrophysiological, and cellular assay data were analyzed using two-tailed t-tests where a single independent variable was being tested, and by two-way analysis of covariance (ANCOVA) followed by Tukey’s HSD post-hoc test in cases where two experimental variables were being tested (i.e. glucose level and genotype status or knockdown); Western data were analyzed using paired, two-tailed t-tests to eliminate differences in baseline intensity between experiments.
+ Open protocol
+ Expand
7

Fluorescence Imaging and Statistical Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Images were analyzed using the Image J plugin Time Series Analyzer where ~10-20 regions of interest (ROIs) of ~2 μm corresponding to responding synaptic boutons were selected and the fluorescence was measured over time. All fitting was done with OriginPro v8 as previously described (Balaji and Ryan, 2007 (link)). Statistical analysis was performed with OriginPro v8 and GraphPad Prism v6.0 for Windows. In most experiments, as indicated in the figure legends, the nonparametric Mann-Whitney U test was used to determine the significance of the difference between two unpaired conditions, as we did not assume that the distributions of our two unpaired datasets follow a normal distribution. For paired comparison of responses, the nonparametric Kolmogorov-Smirnov test was used, as we did not assume that the distributions of our two paired datasets follow a normal distribution. P < 0.05 was considered significant and denoted with a single asterisk, whereas P < 0.01, P<0.001 and P < 0.0001 are denoted with two, three, and four asterisks, respectively. The n value, indicated in the figure legends for each experiment, represents the number of cells imaged.
+ Open protocol
+ Expand
8

ATR-FTIR Spectroscopic Analysis Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
ATR-FTIR was performed using Bruker Alpha II FTIR spectrometer (Bruker Optik GmbH, Germany) equipped with a Diamond Crystal ATR accessory. The spectrum of the Diamond crystal was obtained as background. The samples were prepared by adding 20 µL of solution to the ATR crystal. Absorbance spectra were recorded between the range of 4000 and 399 cm-1, at a resolution of 2 cm-1 and 128 average scans. Data acquisition performed with Opus 7.8 software (Bruker Optik GmbH, Germany) and the acquired data further plotted using OriginPro v.8 (OriginLab, Northampton, MA, USA).
+ Open protocol
+ Expand
9

Synaptic Bouton Fluorescence Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Images were analyzed using the Image J plugin Time Series Analyzer V3 where 10-20 regions of interest (ROIs) of ~2 μm corresponding to responding synaptic boutons were selected and the fluorescence was measured over time. All fitting was done with OriginPro v8 as previously described (Balaji and Ryan, 2007 (link)). Statistical analysis was performed with OriginPro v8 and GraphPad Prism v6.0 for PC. In most experiments, the Mann–Whitney U test was used to determine the significance of the difference between two conditions. For paired comparison of responses before and after treatment with dorsomorphin, the Kolmogorov-Smirnov test was used. P < 0.05 was considered significant and denoted with a single asterisk, whereas P < 0.01, P<0.001 and P < 0.0001 are denoted with two, three, and four asterisks, respectively. The n value, indicated in the figure legends for each experiment, represents the number of cells imaged.
+ Open protocol
+ Expand
10

Comparative Analysis of Cellular Response

Check if the same lab product or an alternative is used in the 5 most similar protocols
Data are expressed as mean ± standard deviation (SD). Data were analyzed for statistical significance by two-way ANOVA with a significance level p<0.05 and Tukey-Kramer and Holm-Bonferroni post-test methods for means comparison (Origin Pro v.8 software, OriginLab, USA).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!