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21 protocols using dm16000b

1

Immunofluorescent Staining of Circulating Cells

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The captured cells, released from the chip onto the filter membrane, were fixed with 4% paraformaldehyde, permeabilized with 0.1% triton X-100 in 1x PBS, and blocked with bovine serum albumin (Millipore, Bedford, MA). Subsequently, cells were stained with rabbit anti-human cytokeratin 20 (CK20; Abcam, Cambridge, UK) and rat anti-human CD45 (Abcam) overnight at 4°C and followed by PBS wash. After PBS washing, cells were incubated with the FITC conjugated goat anti-rat IgG antibody (Abcam) and the Alexa Fluor® 568 anti-rabbit IgG antibody (Life Technologies) for 1h at room temp, the excess antibodies were then removed by PBS washing and photographed by fluorescence microscope (Leica DM16000B). For immunostaining of fibroblast cells, α-smooth muscle actin (α-SMA, DAKO, Denmark) and fibroblast growth factor receptor (FGFR, Abcam) were used as fibroblast markers.
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2

Immunofluorescence Staining of Cells

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After K1 cells and TPC-1 cells were treated, cells were fixed in 4%paraformaldehyde for 15 min at room temperature. The fixed cells were blocked for1 h with 5% normal goat serum in PBS and incubated with a diluted solution of the primary antibody (1:100, ab71333, Abcam, MA, United States) at 4°C overnight. Cells were then washed in PBS for 3 times and incubated for 1 h with secondary biotin-labeled goat anti-rabbit antibody to immunoglobulin G (1:1,000, ab6721, Abcam, MA, United States). Nuclei were counterstained with 4’, 6-diamidino-2-phenylindole (DAPI) (Beyotime Biotechnology, Shanghai, China). Preparations were then observed with a fluorescent microscope (Leica DM16000B, Germany) and images were record.
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3

Immunofluorescent Staining of Cell Lines

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BCPAP and TPC-1 cells were fixed in 4% paraformaldehyde for 15 min at room temperature. The fixed cells were blocked with 5% normal goat serum for 1 h and were incubated with a diluted solution of the primary antibody (1:100, ab71333, Abcam, MA, U.S.A.) at 4°C overnight. Cells were then washed in PBS for three times and incubated for 1 h with secondary biotin-labeled goat anti-rabbit antibody to immunoglobulin G (1:1000, ab6721, Abcam, MA, U.S.A.). Nuclei were counterstained with DAPI (Beyotime Biotechnology, Shanghai, China). Preparations were then observed with a fluorescent microscope (Leica DM16000B, Germany) and images were recorded.
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4

Live Imaging of Gonad Development

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Live imaging was performed as previously described (Anllo et al., 2019 (link); Ong et al., 2019 (link)). Images were acquired with a Leica DM16000 B spinning disk confocal with a 63 ×1.2 N.A. water immersion objective, using an EMCCD camera (Andor iXon 3 897E or Hamamatsu photonics, model C9100-13) controlled by Metamorph software. Z stacks were taken at 5-minute intervals, with 36 1 um z-slices through the gonad.
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5

Extended Imaging of Testis Samples

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Extended time-lapse imaging was performed as previously described [21 (link)]. Briefly, testes were dissected in Ringers solution and transferred to the coverslip bottom of an imaging dish (Matek). After removing the Ringers, testes were covered in imaging media (15% FBS, 0.5× penicillin/streptomycin, 0.2 mg/mL insulin in Schneider’s insect media). Testes were imaged for up to 20hrs on either a Leica DM16000 B inverted spinning disk confocal using a 63×/1.2 NA lens or an Olympus IX71 inverted spinning disk confocal using a 60×/1.2 NA lens, and one micron step size (38-43micron stacks). Unless otherwise indicated, images were acquired every 30 minutes. The full 4D data set was used for analysis. Projections of 3-5 Z planes were used for figure panels. Any samples appearing physically damaged were removed from the dish prior to imaging. Experiments were repeated on at least three separate days and a minimum of 10 testes were analyzed for each genotype.
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6

Viability Assessment of Microcarrier-Attached Cells

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The viability of cells attached to the microcarriers after 24 h of culture was determined by incubating the cellularized microcarriers with 10% (v/v) Presto Blue Cell Viability Reagent (Invitrogen, United Kingdom) in 2 ml proliferation medium in a 6-well plate. After incubating for 2 h at 37°C, 100 μl of the supernatant was transferred into black-walled 96-well plates (Corning, United Kingdom) and the fluorescence intensity was measured at 560 nm (exc) and 620 nm (em).
Live-Dead staining (Thermo Fisher Scientific, United Kingdom) was used to qualitatively assess cell viability on the PLGA TIPS microcarriers after 21 days incubation. Samples were imaged immediately using an inverted fluorescence microscope (Leica DM16000B).
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7

Immunofluorescence Analysis of NF-κB Pathway

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The cells were first grown on an 8-well slide; then, they were incubated with the NucBlue® Live Cell Stain reagent (Invitrogen) for 20 min, fixed with 4% paraformaldehyde for 15 min, and incubated with 0.1% Triton 100 for 20 min. After being blocked with 2% BSA in PBS for 20 min, the cells were incubated with the following primary antibodies overnight at 4 °C: NF-κB antibodies (1:100, ab32536, Abcam), TNF-α antibodies (1:100, ab6671, Abcam), TAK1 antibodies (1:1000, ab109526, Abcam), TAB1 antibodies (1:200, ab227210, Abcam), and p-IκBα (B-9) antibodies (1:100, sc-8404, Santa Cruz Biotechnology). The cells were then washed with PBS, incubated with the corresponding secondary antibodies for 1 hour, and visualized using a fluorescent microscope (DM16000B, Leica, Heerbrugg, Switzerland). The tissues were cut into 8-μm-thick sections. After dewaxing, dehydration, and antigen retrieval, the sections were blocked using 5% serum, incubated with the primary antibodies overnight at 4 °C as mentioned above, and then incubated with biotin-labeled secondary antibodies for 1 h at room temperature.
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8

Assessing SiO2 NP Cytotoxicity in R28 Cells

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R28 cells were seeded in 96-well plates at a density of 1 × 104 cells/well and cultured overnight in a CO2 incubator. The cells were exposed to SiO2 NPs at different concentrations (5–80 µg/mL) for 12 and 24 h. The changes in cell morphology were examined using a phase-contrast microscope (Leica DM16000B, Heidelberg, Germany).
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9

Evaluating Cytotoxicity of Clay Nanoparticles

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HCEC-B4G12 cells were collected and plated in 96-well plates at a density of 1 × 104 cells/well and cultured overnight in a CO2 incubator. Next, the cells were exposed to Na-Mt, H-Na-Mt, C-H-Na-Mt, Ca-Mt, and MMt having different concentrations (1.56–100 μg/mL) for 24 and 48 h. As recently described [30 (link)], the ATP levels were measured by using the CellTiter-Lumi™ Plus Luminescent Cell Viability Assay (Beyotime, Beijing, China), while the LDH Release Assay (Beyotime, Beijing, China) was used to assess the membrane integrity of HCEC B4G12 cells, with cell viability examined by applying the Cell Titer 96 Aqueous One Solution Cell Proliferation Assay (Promega Corporation, Madison, WI, USA). Luminescence and absorbance were respectively recorded in a microplate reader (SpectraMax ID3, Molecular Devices, USA). Finally, morphological changes of HCEC-B4G12 cells were also examined under a phase-contrast microscope (Leica DM16000B, Germany).
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10

Multifluorescent Imaging with Leica Microscope

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All images were acquired using a Leica TCS SP5 laser scanning microscope (Leica, DM16000 B, Wetzlar) and Leica Application Suite Advanced Fluorescence Software (LAS, AF 2.6). Multifluorescent images were obtained using the sequential scan mode. z stacks were made of each section, and crosstalk of fluorophores was eliminated automatically by the software. Images were further analyzed using ImageJ (National Institutes of Health).
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