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4 protocols using ab70311

1

Immunohistochemical Analysis of UBR5 Expression

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Tumor and adjacent normal tissues in cohort 2 were used for immunohistochemistry (IHC) analysis. A standard protocol using anti-UBR5 antibody (ab70311; Abcam, Cambridge, MA, USA) was used to detect UBR5 expression. Sections were counterstained with hematoxylin, and immunoreactivity was scored using the H-score system by two investigators on the basis of the proportion of positively stained cells. Patients with ≥ 50% positive cells were graded as highly expressive, whereas those with < 50% positive cells were classified as lowly expressive.
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2

Immunoblotting Analysis of Protein Expression

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Whole protein was extracted using radioimmunoprecipitation assay lysis buffer (Beyotime) and quantified using the bicinchoninic acid Protein Assay Kit (Beyotime). Briefly, a 20 μg protein aliquot was loaded into 10% sodium dodecyl sulfate polyacrylamide gel electrophoresis for separation, followed by electroblotting on a polyvinylidene fluoride membrane (Merck Millipore, Burlington, MA, USA), blocking using 5% fat-free milk, and overnight incubation with the following primary antibodies: anti-UBR5 (ab70311; Abcam), anti-AXIN1 (ab55906; Abcam), anti-β-catenin (ab32572; Abcam), anti-Survivin (ab76424; Abcam), anti-C-myc (ab39688; Abcam), anti-lactate dehydrogenase A (LDHA, ab101562; Abcam), anti-pyruvate kinase isozymes M2 (PKM2, ab137852; Abcam), anti-H3 (ab1791; Abcam), and anti-GAPDH antibody (60004-1-1G; ProteinTech, Rosemont, IL, USA). They were washed thrice with Tris-buffered saline with Tween 20 and incubated with horseradish peroxidase-conjugated secondary antibodies (A0208, A0216; Beyotime). Finally, the blot was imaged using the Enhanced Chemiluminescence Detection Kit (Pierce Biotechnology), and the band intensity was measured using Image-Pro Plus 6.0 software, with GAPDH as the loading control.
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3

Immunoprecipitation and Western Blotting

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Cells were lysed with radioimmunoprecipitation assay (RIPA) buffer and incubated with anti‐USP14 (ab70311; Abcam), anti‐EGFR (ab52894; Abcam), or normal IgG (sc‐2027; Santa Cruz Biotechnology, Inc.) antibodies and then incubated with protein A/G PLUS‐Agarose beads (sc‐2003; Santa Cruz Biotechnology, Inc.) for 2 h at 4°C. The immune complex was washed thrice with lysis buffer. Proteins were then detected with standard Western blot analysis using anti‐USP14 (ab175810; Abcam), anti‐EGFR (ab32077; Abcam), and anti‐ubiquitin (ab7780; Abcam) antibodies.
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4

Generation of Stable Cell Line Expressing T7 Polymerase

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BSR-T7/5 cells stably expressing the T7 phage RNA polymerase were generated by Buchholz et al. [90 (link)], and were a kind gift from Prof. Xiufan Liu (Key Laboratory of Animal Infectious Diseases, Yangzhou University, China). The parental NDV (rSS1GFP) and the mutant NDV (rSS1GFP-M/NLSm) carrying M/NLS mutation were generated in our previous study [10 (link)], which were plaque purified three times in chicken embryonic fibroblasts and propagated once in specific pathogen-free (SPF) embryonated chicken eggs. The rabbit polyclonal antibodies against NDV M protein and NP protein was prepared in our laboratory. The rabbit polyclonal antibodies against ENY2 (DF12979), BRD2 (DF12857), RPL18 (DF3700), RPL34 (DF3708), PSMD3 (DF3645), RAB12 (DF12459), TRAF6 (AF5376), NF-κB p65 (AF5006), phospho-NF-κB p65 (Ser536) (AF2006), GAPDH (AF7021), GFP (T0006), HA (T0050) and IL-2 (AF5105) were purchased from Affinity Biosciences (USA). The rabbit polyclonal antibodies against POP1 (ab254978), SWD2 (ab220240), UBR5 (ab70311), STX5 (ab217130), and rabbit monoclonal antibody against phospho-TIFA (Thr9) (ab214815) were purchased from Abcam (USA). The rabbit polyclonal antibody against TIFA (61358S) was purchased from Cell Signaling Technology (USA).
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