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24 protocols using biocoat control insert

1

Ephrin-B2 Modulation of Cell Migration

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CAL27 cells or LY2 were serum starved overnight prior to seeding (2.5× 105 cells/well) in serum-free media into the upper chamber of a 24 well plate insert with 8.0 μM pores (BioCoat Control Inserts, BD). Bottom chamber was filled with appropriate media containing 10% FBS and pre-clustered control-Fc or ephrinB2-Fc (R&D Systems). Cells were incubated in a 37oC cell culture incubator and allowed to migrate for 48 h (CAL27) or 24 h (LY2). To prepare membranes for imaging, un-migrated cells in the upper chamber were removed according to manufacturer’s instructions and migrated cells were stained in 0.1% crystal violet (10% methanol), washed in dH2O, and allowed to dry overnight before membrane was cut and mounted on a microscope slide with immersion oil. An image of the membrane was taken at 4x magnification and number of migrated cells was counted using ImageJ software (NIH). Experiment was repeated 2–3 times. Each condition had three replicates.
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2

Migration and Invasion Assays

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Migration assays have been described previously in detail.6 (link),23 Tca-8113 cells (1×105 cells in 100 μL DMEM supplemented with 1% FBS) were placed in the top chamber of transwell migration chambers (8 μM BioCoat Control Inserts, BD). The lower chamber was filled with 600 μL DMEM containing 10% FBS. Matrigel invasion assays were performed using modified Boyden chambers with polycarbonate Nuclepore membrane. Pre-coated filters (6.5 mm in diameter, 8 μm pore size, Matrigel 100 μg/cm2) were rehydrated with 100 μL medium. Then, 1×105 cells in 100 μL serum-free DMEM supplemented with 1% BSA were placed in the upper part of each chamber, whereas the lower compartments were filled with 600 μL DMEM containing 10% serum. After incubating for 18 hours at 37°C, unmigrated cells or non-invaded cells were removed from the upper surface of the transwell membrane with a cotton swab, and migrated cells on the lower membrane surface were fixed, stained, photographed, and counted under high-power magnification.
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3

Evaluating NPC Cell Migration and Invasion

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Transwell assays were performed to evaluate the migratory and invasive ability of NPC cells. NPC cells were transfected with miR-92a mimics or inhibitor in six-well plates before seeding into the transwell chambers. The cells were resuspended in serum-free medium and were seeded into plates with 8 μm BioCoat control inserts (BD Biosciences, Bedford, MA, USA). Serum-containing medium (20% fetal bovine serum) was used in the lower chamber as the attractant. Regarding the invasion assay, each upper chamber was coated with a mixture of Dulbecco’s Modified Eagle’s Medium and Matrigel (Becton-Dickinson Labware, Bedford, MA, USA) at a ratio of 6:1; 24 hours after cell seeding, NPC cells on the upper surface of the filter were removed with cotton swabs. Then, the migrated or invaded cells in the lower surface were stained with 0.1% crystal violet, and the cell numbers were obtained from ten different fields of the lower surface of the filter. Three independent experiments were performed.
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4

Matrigel-Based Invasion Assay for GBM Cells

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GBM cells were serum-starved for 4 hours before seeding (1 × 105 cells/well) in serum-free media into the upper chamber of a 24-well plate insert with 8.0 μM pores (BioCoat Control Inserts; BD Biosciences, Bedford, MA). Matrigel was prepared in a 1:10 dilution in serum-free media and utilized as the extracellular matrix through which the cancer cells can invade. The matrigel was added to the floor of the insert and allowed to set for 4 hours. The bottom chamber was filled with 10% complete media. The cells were incubated at 37°C and allowed to invade for 24 hours. For stimulation experiments, pre-clustered Fc protein was added to the cells at a final concentration of 2 μg/mL. To prepare the inserts for imaging, noninvading cells in the upper chamber were washed and removed and the cells that invaded through the matrigel were stained with 0.1% crystal violet.20 (link) For experiments involving FAK inhibitor, serum-starved cells (1 × 105 cells/well) were plated in the top-chamber in the absence or presence of 5 μM FAK inhibitor Y15 for 48 hours followed by analysis. Images were taken at either 4× or 10× magnification. The number of cells invading through the matrigel were quantified using the ImageJ software.
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5

Androgen-Induced Cell Migration Assay

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LNCaP cells grown in phenol red-deficient RPMI 1640 medium containing 10% FBS for 72 hrs were dissociated using Accutase (Invitrogen) and counted with a hemocytometer. 75,000 cells were seeded per well in 24-well plates with phenol red-deficient RPMI medium containing 1% charcoal-stripped FBS. The top and bottom of Biocoat control inserts (BD Biosciences, Palo Alto, CA), an 8 μm membrane pore size, were coated with 5 μg/ml of fibronectin in DPBS for 2 hrs at 37°C and subsequently washed with 1 DPBS and dried at 25°C. Cells were seeded into the top chamber, and the bottom chamber was filled with phenol red-deficient RPMI medium containing 1% charcoal-stripped FBS plus androgen (0, 0.1, 1, or 10 nM R1881). Migration was allowed to proceed at 37°C under 5% CO2 for 18–24 hrs. The cells were then fixed with −20°C methanol for 10 min at 25°C, and inserts were stained with 0.5% crystal violet (Sigma) in 25% methanol for 10 min at 25°C. Inserts were washed with ddH2O for 5 mins at 25°C and visualized under a light microscope to count cells. The means and standard deviations for counted cells were calculated, and ANOVA was used to determine statistical significance (*p ≤ 0.05, n = 3) between vehicle (ethanol) and androgen-treated cells.
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6

Cell Migration and Invasion Assay

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To assess cell migration, 4 × 104 cells in 150 μL DMEM with 1% FBS and indicated concentrations of EP (0, 10, 20 and 30 mM) were seeded in the upper chamber of transwell migration chambers (8 μm BioCoat Control Inserts, Becton Dickinson Labware, Bedford, MA, USA). A total of 600 μL DMEM containing 10% FBS was added into the lower chamber. After 24 h, the cells in the upper chamber were fixed by 4% paraformaldehyde for 20 min at room temperature, stained with 1% crystal violet for 15 min, and photographed in three independent 20× fields for each well. Transwell invasion assay was similarly performed with transwell upper chamber pre-coated with Matrigel. All experiments were performed in triplicate.
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7

Transwell Cell Migration and Invasion Assays

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Transwell cell migration assays were performed on 12 well plates with 8-µm BioCoat control inserts (Becton-Dickinson, Franklin Lakes, NJ, USA). In total, 1–2×105 U251 or U87 cells transfected with IF1 or NT shRNA were suspended in 500 µl serum-free DMEM and then seeded in the upper well of a Transwell chamber. DMEM (750 µl) supplemented with 10% FBS was added to the lower well. Subsequent to completion, the membranes were removed, the cells on the side facing the upper well were wiped with a cotton swab, and the adherent cells on the undersurface of the insert were stained using crystal violet. At least six representative images of each well were captured and the number of cells were counted using ImageJ software. The BioCoat Matrigel invasion chamber (Becton Dickinson Labware) was used for Transwell cell invasion assays and the following protocols were the same as the Transwell cell migration assays. The experiments were performed in triplicate (15 (link)).
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8

In Vitro Cell Migration and Invasion Assay

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To assess cell migration in vitro, cells (1.5×105 in 500 μL Dulbecco’s Modified Eagle’s Medium [DMEM] supplemented with 1% fetal bovine serum [FBS]) were seeded in the upper chamber of transwell migration chambers (8 μm BioCoat Control Inserts, Becton Dickinson Labware, Bedford, MA, USA). The lower chamber was filled with 750 μL DMEM supplemented with 20% FBS and indicated concentrations of calycosin (100 and 200 μM, 1/500 of dimethyl sulfoxide [DMSO] set as the vehicle). After 18 hours, the cells in the lower chamber were fixed by methanol, stained with 0.1% crystal violet in methanol, and photographed in three independent 10× fields for each well. Crystal violet was then dissolved with 33% acetic acid, and absorbance was read at 570 nm. Invasiveness assay was similarly performed with matrigel-coated (BD Biosciences, San Jose, CA, USA) transwells. And the drug incubation time was prolonged to 24 hours. All the experiments were performed in triplicate and repeated three times.
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9

Transwell Assay for Cell Migration

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To assess cell migration in vitro, MCF-7 cells (1 × 105 cells in 100 μl DMEM supplemented with 1% FBS) were placed in the top chamber of transwell migration chambers (8 μm BioCoat Control Inserts, Becton Dickinson Labware, Bedford, MA). The lower chamber was filled with 600 μl DMEM supplemented with 10% FBS. After 24 h, unmigrated cells were removed from the upper surface of the transwell membrane with a cotton swab, and migrated cells on the lower membrane surface were fixed, stained, photographed, and counted under high-power magnification.
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10

Transwell Assays for Cell Migration and Invasion

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Transwell cell migration assays were done in 12 well plates with 8-μm BioCoat control inserts (Becton Dickinson Labware, Bedford, MA). 1-2 × 10 5 pMMP-Fibulin-5 or EV transfected U251 or U87 cells that were suspended in 500 μL serum free DMEM were seeded in the upper well and DMEM medium with 10% FBS, as indicated, in the lower well. After completion, membranes were removed, wiped on the side facing the upper well, and stained with crystal violet. At least 6 representative images of each well were taken and cell numbers were counted using ImageJ. BioCoat Matrigel invasion chamber (Becton Dickinson Labware) was used for transwell cell invasion assays and the following protocols were the same as transwell cell migration assays (Li et al., 2014a) .
The experiments were all performed in triplicate for confirmation.
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