The largest database of trusted experimental protocols

70 protocols using bit 9500

1

Culturing Patient-Derived GBM TPCs

Check if the same lab product or an alternative is used in the 5 most similar protocols
Monolayer cultures of patient-derived GMB TPCs were propagated on Matrigel-coated plates in DMEM:F12 Neurobasal Medium (1:1; Gibco), 1% B27 supplement (Gibco), 10% BIT 9500 (StemCell Technologies), 1 mM glutamine, 20 ng/ml EGF (Chemicon), 20 ng/ml bFGF, 5 µg/ml insulin (Sigma), and 5 mM nicotinamide (Sigma). The medium was replaced every other day and the cells were enzymatically dissociated using Accutase prior to splitting. Fibroblasts, iPSCs, and iPSC-derived NPCs were cultured as previously described (Marchetto et al., 2010 (link); Kim et al., 2011 (link)).
+ Open protocol
+ Expand
2

Notch Signaling Pathway Knockdown

Check if the same lab product or an alternative is used in the 5 most similar protocols
The PRRL lentiviral backbone was kindly provided by Hana Raslova (Institut Gustave Roussy, France). Knockdown experiments were performed by using the PRRL-EF1a/EGFP vector with H1 driving hairpin expression. shNotch1 (GGAGCATGTGTAACAT CAACA), shNotch2 (GCAGAGGACTCTTCTGCTAAC) have been described previously (Delaney et al., 2005) . shNotch1 and shNotch2 knockdown vectors reduce Notch1/2 levels by R 80% in UCB CD34 + HPCs (data not shown). UCB CD34 + cells (purity > 90%) were transduced 6-8 hours at a multiplicity of infection of 20-25 in RPMI medium supplemented with 20% BIT 9500 (StemCell Technologies) and SCF (50 ng/ml), FLT3L (50 ng/ml), TPO (20 ng/ml) and IL-3 (10 ng/ml; all from Milteynyi) before injection to irradiated mice.
+ Open protocol
+ Expand
3

Hematopoietic Stem Cell Expansion

Check if the same lab product or an alternative is used in the 5 most similar protocols
Recombinant human interleukin 3 (IL-3), IL-6, IL-9, IL-11, stem cell factor (SCF), and thrombopoietin (TPO) were purchased from PeproTech, Inc. (Cranbury, NJ, USA). BIT 9500 was purchased from Stemcell Tech. (Vancouver, BC, Canada). Anti-CD61 magnetic microbeads and MACS cell-separation tools were purchased from Miltenyi Biotec (Bergisch Gladbach, Germany). Fluorescein isothiocyanate (FITC)-conjugated anti-CD41, phycoerythrin (PE)-conjugated anti-CD42b, allophycocyanin (APC)-conjugated anti-CD34, and IgG antibodies were purchased from BD Biosciences (Franklin Lakes, NJ, USA). Signaling inhibitors, miRNA mimics, and miR-negative control were purchased from Sigma-Aldrich (St. Louis, MO, USA). The miRNA inhibitors were purchased from Thermo Scientific (Figure 4) (Waltham, MA, USA) and Sigma-Aldrich (Figure 6) (St. Louis, MO, USA).
+ Open protocol
+ Expand
4

Lentiviral Transduction of PRDM1-overexpressing T Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
CD3+ T cells were purified from BMMCs by CD3 microbeads (Miltenyi Biotec, 130-097-043) according to manufacturer’s instructions. CD4 conventional T cells (CD4+CD25-) were isolated by negative selection with CD25 microbeads (Miltenyi Biotec, 130-092-983) followed by positive selection with CD4 microbeads (Miltenyi Biotec, 130-045-101). T cells were pre-stimulated with Dynabeads Human T-Activator CD3/CD28 beads (Invitrogen, 11131D) and 100 U/ml rhIL-2 in IMDM medium (Gibco, Invitrogen) containing 10% BIT 9500 (Stemcell Technologies, 09500) for 24 h. The PRDM1-overexpressing lentivirus was purchased from Sangon Biotech (Shanghai, China). After 24 h, the cells were transduced with lentiviruses and added polybrene (Sigma, USA) at a dose of 6 μg/ml, then incubated for another 24 h at 37°C and 5% CO2. The cells were incubated for another 24 h at 37°C and 5% CO2, and fresh medium was changed. GFP+ cells were isolated after a 72 h infection and cultured in IMDM containing 10% BIT 9500 with 100 U/ml rhIL-2 routinely used.
+ Open protocol
+ Expand
5

Culturing LT-HSCs for Colony Formation

Check if the same lab product or an alternative is used in the 5 most similar protocols
LT-HSCs were sorted into 96-well plates (one cell-one well), and then cultured for 14 days in liquid medium supplemented with 10% FBS, 20% BIT 9500 (StemCell Technologies), 2 mM ℒ-glutamine (Life Technologies), 5 × 10−5 M β-ME (Sigma-Aldrich), 10 ng/mL stem cell factor (SCF, Pepro Tech), 10 ng/mL thrombopoietin (TPO, Pepro Tech), 10 ng/mL Interleukin 13 (IL-13, Pepro Tech) and 100 U/mL penicillin/streptomycin. Three classes of colonies were defined under the microscope: large (consisting of more than 10 000 cells); intermediate (1 000-10 000 cells); and small (1-1 000 cells).
+ Open protocol
+ Expand
6

Differentiation of CD36-positive Proerythroblasts

Check if the same lab product or an alternative is used in the 5 most similar protocols
The cell line K562 (ATCC) was cultured in RPMI 1640 medium with GlutaMAXTM (Invitrogen) supplemented with 10% fetal bovine serum at 37°C with 5% CO2 and passaged every 3 days. CD36-positive human proerythroblasts were derived from bone marrow CD34-positive cells, which were purchased from Stem Cell Technologies (70002.1) and cultured in erythroid differentiation condition as previous described (Wong et al., 2008 (link)). Briefly, the CD34-positive cells at 104 cells/ml were grown in the serum-free erythroid expansion medium containing Alpha minimum essential medium (AMEM; Mediatech) and 20% BIT9500 (Stem Cell Technologies) to achieve bovine serum albumin, recombinant human insulin and iron-saturated human transferrin at 10 mg/ml, 10 μg/ml, and 200 μg/ml, respectively. In addition, 900 ng/ml ferrous sulfate (Sigma), 90 ng/ml ferric nitrate (Sigma), 1 μM hydrocortisone (Sigma), 100 ng/ml of recombinant human stem cell factor (SCF; Stem Cell Technologies), 5 ng/ml of recombinant human interleukin-3 (IL-3; R&D Systems), and 3 IU/ml of recombinant human EPO were also included. Fresh medium was added into the culture to maintain cells at 2 × 106 cells/ml. The cells were cultured for 7 days to obtain CD36-positive cells.
+ Open protocol
+ Expand
7

In Vitro Erythroid Progenitor Generation

Check if the same lab product or an alternative is used in the 5 most similar protocols
Erythroid progenitor cells (EPCs) were generated in vitro from peripheral blood mononuclear cells (PBMC), obtained from the leukocyte-enriched buffy coats of anonymous blood donors available for institutional research purposes from the Immunohematology and Transfusion Service, S.Orsola-Malpighi University Hospital, Bologna (authorization 0070755/1980/2014). Availability was granted under conditions complying with Italian privacy law. Neither specific ethics committee approval nor written consent from donors was required for this research project. PBMC, isolated by centrifugation in Ficoll-Paque Plus (GE Healthcare Bio-Sciences AB, Milan, Italy), were cultured in IMDM (Gibco) supplemented with 20% serum substitute BIT 9500 (StemCell Technologies, Monza, Italy), and enriched with erythropoietic growth factors as described [13 (link)]. The cells were maintained at 37 °C in 5% CO2 and used for infection experiments at day 9 ± 1, when permissiveness to B19V infection is maximal. UT7/EpoS1 cells were cultured in IMDM, supplemented with 10% FCS and 2 U/mL rhu erythropoietin, at 37 °C and 5% CO2
+ Open protocol
+ Expand
8

Hematopoietic Progenitor Cell Assay

Check if the same lab product or an alternative is used in the 5 most similar protocols
Sorted EB cells were replated in methyl cellulose containing 10% plasma-derived serum (PDS, Antech; Texas), 5% PFHM II, 1× Glutamax, 1× BIT9500 (STEMCELL Technologies) and MTG (4.5 × 10–4 M), together with kit ligand (1% conditioned medium). Blast colonies were counted 4 days later15 (link).
+ Open protocol
+ Expand
9

Myeloid Differentiation Monitoring Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
To monitor myeloid differentiation, sorted GFP+ CD34+ cells were grown in myeloid differentiation medium X-VIVO supplemented with 20% BIT 9500 (Stem Cell Technologies), SCF 100 ng/ml, FLT3-L 10 ng/ml, IL-3 20 ng/ml, G-CSF 20 ng/ml, GM-CSF 20 ng/ml, and IL-6 20 ng/ml (PeproTech) for 4 days, the expression of the myeloid differentiation marker Mac-1 was measured by flow cytometry.
+ Open protocol
+ Expand
10

Murine Primary Cell Culture Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
Primary MEFs were obtained from 13.5-day embryos of the indicated genotypes based on the protocol from Wicell and cultured in standard DMEM medium containing 10% FBS (Millipore) in our lab. Murine ES cell was purchased from Wicell and iPS cells were reprogramming from MEF cells with four factors (Oct4, Sox2, Klf4, and c-Myc). Murine ES and iPSC cells were cultured in ‘ES culture medium’ composed of Knock-Out DMEM (Invitrogen) supplemented with ES cell qualified FBS (20%, Millipore), mouse LIF (1000 U/ml), non-essential amino acids, L-Glutamine, and β-mercaptoethanol. Bone marrow c-kit+ cells were harvested from femurs of mice, enriched by CD177-streptavidin kit (Miltenyi), and cultured in standard BIT9500 (Stemcell Technologies) containing 10% FBS supplemented with murine SCF, Flt-3, and TPO before transduction.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!