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6 protocols using hrp goat anti rabbit igg antibody

1

Western Blot Antibody Validation Protocol

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The following antibodies were used for western blotting: ATXN2 mAb (1: 4000) (BD Biosciences Inc., 611378), 5TF1–1C2 mAb (1:3000) (Millipore Inc., MAB1574), RGS8 rabbit polyclonal Ab (1:5000) (Novus Biologicals, NBP2–20153), PCP-2 antibody (F-3) (1: 3000) (Santa Cruz Inc., sc-137064), β-Actin mAb HRP conjugated (1:10,000) (Sigma Inc., A3854). Anti-PCP4 antibody (1: 5000) (Abcam, ab197377), Homer-3 antibody (E-6) (1: 2000) (Santa Cruz Inc., sc-376155), CEP76 antibody (1: 5000) (Novus biologicals, NBP1–28749), Anti-FAM107B antibody (1: 5000) (Abcam, ab175148). The secondary antibodies were goat anti-mouse IgG-HRP antibody (1:5000) (Sigma Inc., A2304) and goat anti-rabbit IgG-HRP antibody (1:5000) (Vector laboratories, PI-1000). Anti-ASO antibody (Ionis Pharmaceuticals) and appropriate secondary antibody used for IHC are described in the previous paragraph.
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2

Western Blot Antibody Validation Protocol

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The following antibodies were used for western blotting: ATXN2 mAb (1: 4000) (BD Biosciences Inc., 611378), 5TF1–1C2 mAb (1:3000) (Millipore Inc., MAB1574), RGS8 rabbit polyclonal Ab (1:5000) (Novus Biologicals, NBP2–20153), PCP-2 antibody (F-3) (1: 3000) (Santa Cruz Inc., sc-137064), β-Actin mAb HRP conjugated (1:10,000) (Sigma Inc., A3854). Anti-PCP4 antibody (1: 5000) (Abcam, ab197377), Homer-3 antibody (E-6) (1: 2000) (Santa Cruz Inc., sc-376155), CEP76 antibody (1: 5000) (Novus biologicals, NBP1–28749), Anti-FAM107B antibody (1: 5000) (Abcam, ab175148). The secondary antibodies were goat anti-mouse IgG-HRP antibody (1:5000) (Sigma Inc., A2304) and goat anti-rabbit IgG-HRP antibody (1:5000) (Vector laboratories, PI-1000). Anti-ASO antibody (Ionis Pharmaceuticals) and appropriate secondary antibody used for IHC are described in the previous paragraph.
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3

Western Blot Analysis of DNA Damage Signaling

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Western blots were performed based on standard protocols on
whole-cell protein lysates. Membranes were washed three times and proteins
were imaged with Clarity™ Western ECL substrate (#170-5060) from
Bio-Rad on FluorChem M system. Antibodies used were anti-ATRX (sc-15408) and
anti-ATR (sc-51573) from Santa Cruz biotechnology; anti-ATRX (A301-045A)
from Bethyl laboratories LLC; anti-Vinculin (#700062) from Invitrogen;
anti-CHK1 (#2360), anti-pCHK1 Ser345 (#2348), anti-CHK2 pT68 (#2661),
anti-Phospho-Histone H2A.X Ser139 (#2577), and anti-mouse IgG, HRP-linked
Antibody (#7076) from Cell Signaling Technology; anti-ATM pS1981 (ab81292)
from Abcam; and HRP Goat Anti-Rabbit IgG Antibody (P1-1000) from Vector
Laboratories.
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4

Western Blot and Immunofluorescence Assay Protocol

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For Western blots, the
following primary antibodies were diluted in BSA (5%) in 1× PBS
buffer: monoclonal ANTI-FLAG M2 antibody produced in mouse (1:1000,
F1804, Merck); anti-β-actin antibody, mouse monoclonal (1:2000,
A1978, Merck). HRP goat antirabbit IgG antibody (peroxidase) (1:3000,
PI-1000, Vectorlabs), and peroxidase antimouse IgG (H+L) (affinity
purified) (1:3000, PI-2000, Vectorlabs) were used as secondary antibodies.
For IF assays, the following primary antibodies were diluted in
blocking buffer (FBS 3% in 1× PBS): the 5-hydroxymethylcytosine
(5hmC) antibody (pAb) (1:500, Active Motif cat#: 39769)
and monoclonal ANTI-FLAG M2 antibody produced in mouse (1:500, F1804,
Merck). Goat antimouse Alexa Fluor 568 (1:500, A-11031, Invitrogen)
and Goat antirabbit Alexa Fluor 647 (1:500, A-21236, Invitrogen) were
used as secondary antibodies.
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5

Immunoblotting of TBEV Proteins

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Isolation of proteins was performed from the samples used for RNA isolation using RNA Blue according to the manufacturer’s instructions. The resulting protein isolates were separated on 12 % polyacrylamide gels and subsequent immunoblotting detection was performed as described previously [56] . The following antibodies were used: guinea-pig polyclonal serum against TBEV capsid protein (C) (produced in-house), anti-GAPDH antibody [EPR16891] (Abcam; #ab181602), HRP goat anti-guinea pig (Novex; #A18769), HRP goat anti-rabbit IgG antibody (Vector Laboratories; #PI-1000). Sample inputs were standardised by equal protein amounts loaded into each well (10 µg).
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6

Western Blot Analysis of Drosophila Phospho-p70 S6 Kinase

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Protein extracts were prepared from flies homogenized in 0.5 ml of PBS containing 1.5% Triton X-100 and Complete mini EDTA-free Protease Inhibitor Cocktail (Sigma, Missouri, USA). 50μg of protein was mixed with 4X SDS PAGE loading buffer and denatured at 95ºC. Protein mixtures were loaded in Bio-Rad precast gels (Bio-Rad, California, USA) and run at 130 V. Separated proteins were transferred to a nitrocellulose membrane at 30V. Membranes were blocked in 5% BSA in PBS-Tween 1X. Antibodies used were anti-phospho-Drosophila p70 S6 Kinase (Thr398) (Cell Signalling, Massachusetts, USA), anti-p70 S6 kinase alpha (C-18) (Santa Cruz, USA), anti-beta Tubulin [EPR16774] (Abcam, Cambridge, UK), HRP goat anti-rabbit IgG antibody (Vector Laboratories, Peterborough, UK). ImageJ was used for quantification of protein band intensities.
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