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Micromass lct premier

Manufactured by Waters Corporation
Sourced in United States

The Micromass LCT Premier is a high-performance liquid chromatography-mass spectrometry (LC-MS) system designed for accurate mass analysis and identification of compounds. It features a time-of-flight (TOF) mass analyzer and can perform both positive and negative ion detection.

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6 protocols using micromass lct premier

1

Solid-Phase Peptide Synthesis and Purification

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Peptides were synthesized in our laboratory by standard solid-phase peptide synthesis in N-methyl-2-pyrrolidone using Syro I and Syro II synthesizers. Amino acids and resins were used as purchased from Nova Biochem. Peptides were purified by reversed-phase HPLC using a Waters HPLC system equipped with a preparative Waters X-bridge C18 column. The mobile phase consisted of water/acetonitrile mixtures containing 0.1% TFA. Peptide purity and composition were confirmed by LC-MS using a mass spectrometer (Micromass LCT Premier; Waters) equipped with a 2795 separation module (Alliance HT) and photodiode array detector (2996; Waters Chromatography). LC-MS samples were run over a Kinetex C18 column (Phenomenex) in a water/acetonitrile gradient. Analysis was performed using MassLynx 4.1 software (Waters Chromatography). Peptides were purified twice if necessary.
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2

Analytical Characterization of Organic Compounds

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Optical rotations were recorded on a Bellingham and Stanley ADP440+ polarimeter (Bellingham + Stanley Ltd., Longfield Road, Tunbridge Wells, Kent TN2 3EY, UK). NMR spectra were obtained on Bruker AVANCE III (Bruker Corporation, Billerica, MA, USA) spectrometers (400 or 500 MHz for 1H and 100 or 125 MHz for 13C), using a 5 mm BBOZ probe. The spectra were referenced to residual solvent peaks, δH 3.31 and δC 49.03 for CD3OD. Mass spectra were recorded on a TOF Waters Micromass LCT Premier mass spectrometer (Waters Corporation, 34 Maple street, Milford, CT, USA) using ESI-ionization in negative or positive modes in MS-grade acetonitrile and methanol solutions. For thin-layer chromatographic analyses, pre-coated TLC silica gel 60 F254 (Merck) plates were used. Column chromatography was performed on Merck silica gel (230–400) mesh, and gel filtration chromatography was performed using Sephadex LH-20 (Fluka). Spots on TLC plates were observed under UV light at 254 and 365 nm, and visualised by spraying with p-anisaldehyde/H2SO4 spray reagent (0.5 mL of p-anisaldehyde, 10 mL of glacial acetic acid, 4 mL of concentrated H2SO4 acid and 85 mL of MeOH), followed by heating at 100 °C for 5 min.
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3

ESI-TOF Mass Spectra Analysis

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Electrospray ionization-time-of-flight (ESI-TOF) mass spectra were recorded on a Waters Micromass LCT premier. The samples (40 µM) were prepared in 20 mM NH4OAc buffer (pH 7.0) and annealed just before the measurements (from 85 to 4 °C, −1.0 °C/min).
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4

NMR Characterization of Chemical Compounds

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All reagents were purchased
from Aldrich and used without further purification. 1H
and 13C NMR spectra were recorded with a Bruker Advance
III (400 MHz) spectrometer with tetramethylsilane as an internal standard.
All chemical shifts (δ) are reported in ppm and coupling constants
(J), in Hz. All chemical shifts are reported relative
to tetramethylsilane and d-solvent peaks, respectively. High-resolution
mass spectrometry (HRMS) analysis was performed on a Waters Micromass
LCT Premier (TOF mass analyzer).
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5

Direct Infusion nESI-MS Protein Analysis

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All direct infusion mass spectra were collected on a Waters Micromass LCT Premier equipped with a Z-Spray nESI source. Borosilicate nESI needles were pulled to approximately 3–8 μm tip i.d. on a Sutter Instruments P-97 micropipette puller and gold coated using a Quorum Technologies SC7620 sputter coater as previously described.11 (link) Each acquisition was performed with the emitter tip approximately 6 mm away from the sample cone. To each solution, unless otherwise noted, 0.2% ammonium hydroxide was added to promote analyte deprotonation. Sample flow rates were estimated to be 20–50 nl/min for direct infusion experiments.11 (link) Each protein was examined at 10 μM. Peptide and small molecule concentration in their respective solutions were 5 μM. Spray voltage was applied at – (1.25–1.35) kV and remained constant for each experiment performed. The source region was heated to 65°C for all experiments.
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6

Mass Spectrometric Analysis of Protein Samples

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For LC-MS a Waters Micromass LCT Premier™ time-of-flight mass spectrometer and electrospray ionization were used. Waters MassLynx™ version 4.1 was used for data analysis (see Section 3 of the Supplementary data). The resulting combined positive ion series was deconvoluted using a maximum entropy algorithm (Figure S3). The observed masses were verified by comparison with the predicted masses obtained using the ExPasy ProtParam tool (Table S3).
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