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Pectin from citrus fruit

Manufactured by Merck Group
Sourced in Germany, United States

Pectin from citrus fruit is a natural gelling agent extracted from the peel and pulp of citrus fruits. It is a polysaccharide composed of galacturonic acid units. Pectin can be used as a thickening, gelling, and stabilizing agent in various food and pharmaceutical applications.

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2 protocols using pectin from citrus fruit

1

Pectin Methyl Esterase Activity Assay

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PME activity was assayed as described (Klavons and Bennett, 1986 ) with minor modifications. Fifty milligrams of tomato leaf tissue ground in liquid N2 was incubated for 1h at 4 °C in extraction buffer (20mM Na2HPO4, 20mM citric acid, 1M NaCl, 0.1% (v/v) Tween 20, 0.2% (w/v) PVPP, adjusted to pH 7.0) under shaking. After centrifugation (16 000×g, 30min, 4 °C) the cleared supernatant was desalted by ultracentrifugation (10kDa MWCO, Vivaspin concentrators, Sartorius; Göttingen, Germany) using extraction buffer without PVPP and NaCl, and the protein concentration was determined. PME activity was assayed in a total volume of 300 µl reaction buffer containing 1 µg protein, 100 µg pectin from citrus fruit (≥85% esterified, Sigma-Aldrich; Taufkirchen, Germany), 0.025U alcohol oxidase (from Pichia pastoris, Sigma-Aldrich) in 50mM sodium phosphate buffer pH 7.5. After 30min at 28 °C, the reaction was stopped by the addition of the same volume of 2M ammonium acetate, 19.5mM acetylacetone and 49mM acetic acid and incubated at 68 °C for 15min. The absorbance was read at 420nm against a buffer-only blank to quantify PME activity as nmol methanol µg−1 protein min−1 using a reference curve of 0–175 nmol methanol.
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2

Isolation and Characterization of A. costaricaensis 1805

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A. costaricaensis 1805 was isolated from the decayed citrus peel, identified, and stored in our laboratory. And, it was deposited in China General Microbiological Culture Collection Center (CGMCC), with preservation number CGMCC No.15670. A. costaricaensis was cultured and screened on the potato dextrose agar (PDA) medium and pectin screening basal medium (PSBM) (Phutela et al. 2005) (link), respectively. The minimal medium (MM) or complete medium (CM) used for the RNA-seq strain cultured was prepared as a reference to Gruben, et al. (Gruben et al. 2017) (link).
Pectin from citrus fruit (GalA ≥ 74.0%, Degree of esterification (DE): 6.8%) was purchased from Sigma-Aldrich (USA). Polygalacturonic acid (PGA) (GalA ≥ 85%, MW = 25,000-50,000) were obtained from Aladdin (China). The oligogalacturonides (OGs) standards (DP2-DP10) for product analysis of mutant strains were prepared by our laboratory (Yang et al. 2020) (link).
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