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8 protocols using 1640 medium

1

Kupffer Cell Modulation in NASH

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Kupffer cells (NASH-associated mouse Kupffer cell lines, BeNa Culture Collection, China, BNCC340733) were cultured in Roswell Park Memorial Institute 1640 medium (Cat No. 350-000-CL, Wisent, Nanjing, China) containing 10% (v/v) fetal bovine serum at 37 °C in an atmosphere of 5% CO2. At 70% confluent growth Kupffer cells were pretreated with 50 μM DHA/AA for 4 h and then treated with 100 ng/mL LPS for 6 or 12 h.
For GPR120 knockdown, specific small interfering RNAs (GPR120 siRNA1, GPR120 siRNA2, and GPR120 siRNA3; GenePharma, Shanghai, China) were transfected into Kupffer cells using jetPRIME® transfection reagent (Polyplus Transfection, Beijing, China). The scramble siRNA was used as a negative control (NC siRNA). The sequences are listed in Supplementary Table S1.
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2

Cell Culture Protocol for Cancer Research

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NCI‐H82, G‐401, MDA‐MB‐453, SW48, 786‐O, CFPAC‐1 cells, and HEK293T were sourced from ATCC, WSU‐DLCL2 cell was from Deutsche Sammlung von Mikroorganismen und Zellkulturen (DSMZ) and SF126 cell was from JCRB Cell Bank. NCI‐H82, G‐401, WSU‐DLCL2, and 786‐O were cultured in 1640 medium (WISENT, 350‐000‐CL) with 10% FBS, 1% Pen/Strep. SW48, SF‐126, and HEK293T were cultured in DMEM medium (WISENT, 319‐005‐CL) with 10% FBS, 1% Pen/Strep. CFPAC‐1 were cultured in IMDM medium (MINGZHOUBIO, MPM150510) with 10% FBS, 1% Pen/Strep. MDA‐MB‐453 was cultured in L‐15 medium (WISENT, 323‐050‐CL) with 10% FBS, 1% Pen/Strep. MDA‐MB‐453 was maintained in 100% air at 37 °C and other cells were in 5% CO2 at 37 °C.
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3

Xenograft Model of Human Gastric Cancer

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The MKN-45 human gastric cancer cell line was obtained from the Shanghai Institute of Cell Biology. MKN-45 cells were cultured in Roswell Park Memorial Institute 1640 medium (Wisent, Nanjing, People’s Republic of China) with 10% fetal bovine serum (Gibco, Carlsbad, CA, USA). Cultures were maintained at 37°C with 5% CO2 in a humidified incubator. Male Balb/c nude athymic mice at 4–6 weeks old were supplied by the Department of Experimental Animals, Yangzhou University. All animal experiments were carried out in accordance with the Guide for the Care and Use of Laboratory Animals approved by Nanjing Drum Tower Hospital Laboratory Animals Welfare & Ethical Committee, People’s Republic of China.
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4

ACC2 Knockdown in FaDu and NP69 Cells

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The FaDu cells and NP69 cells were purchased from American Type Culture Collection. The FaDu cells or NP69 cells were cultured in minimum essential medium Eagle’s (Mod.) or 1,640 medium (Wisent, USA) supplemented with 10% fetal bovine serum (Gibco, USA) and antibiotics (100 KU/L penicillin and 100 mg/L streptomycin) in an incubator at 37 °C with 5% CO2. The FaDu and NP69 cells were transiently transfected with ACC2 siRNA (sense, CCUGCCUACUUUCUUCUAUTT; antisense, AUAGAAGAAAGUAGGCAGGTT) (GenePharma, Shanghai, China) using Lipofectamine 3000 (Invitrogen, Carlsbad, CA, USA) following the manufacturer’s instructions and were cultured for another 48 h before being used in experiments.
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5

Culturing Clear Cell Renal Cancer Lines

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Human clear cell renal cell carcinoma cell lines 786-O and 769-P, and human kidney cell line 293T were purchased from the Cell Bank of the Chinese Academy of Sciences (Shanghai, China). 786-O and 769-P cells were cultured in 1640 medium (Wisent, Nanjing, China). 293T cells were cultured in Dulbecco’s Modified Eagle Medium (DMEM) medium (Wisent, Nanjing, China). The culture medium was supplemented with 1% penicillin/streptomycin (Wisent, Nanjing, China) and 10% fetal bovine serum (FBS) (Wisent, Nanjing, China). Cells were cultured in a 37 °C humidified incubator containing 5% CO2.
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6

KRAS G12C Lung Adenocarcinoma Cell Lines

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Lung adenocarcinoma cell lines harbor KRAS G12C mutations were obtained from American Type Culture Collection. NCI-H23 (H23) and NCI-H358 (H358) cells were cultured in Roswell Park Memorial Institute 1640 medium (WISENT Inc., Nanjing, China) and supplemented with 10% fetal bovine serum (Excell Bio Inc., Taicang, China) and 50 µg/ml penicillin–streptomycin (Invitrogen). All cells used in this study were maintained in a 5% CO2 cell culture incubator at 37 °C. AMG-510 and Cisplatin (Targetmol Co. Ltd., Shanghai, China) were dissolved in dimethyl sulfoxide and H2O, respectively, then stored at -80 °C until use. Untreated cell lines were subdued until cell viability assays for determining the concentration inhibiting 50% of cell viability (IC50).
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7

Kupffer Cell LPS Response via Mtfmt Knockdown

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Kupffer cells (BeNa Culture Collection, Kunshan, China, BNCC340733) were cultured at 37 °C in a 5% CO2 atmosphere in 1640 medium (Wisent, cat. no.: 350-000-CL, Nanjing, China) containing 10% (v/v) fetal bovine serum. During 70% confluent growth, Kupffer cells were treated for 6 or 12 h with 100 ng/mL LPS [48 (link)]. Using jetPRIME® transfection reagent (Polyplus Transfection, Beijing, China), specific small interfering RNAs (Mtfmt siRNA1, Mtfmt siRNA2, and Mtfmt siRNA3; GenePharma, Shanghai, China) were transfected into Kupffer cells to knock down Mtfmt. The scramble siRNA served as a negative control (NC siRNA). The sequences are listed in Supplementary Table S2.
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8

Macrophage-Mediated Lipoprotein Analysis

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Sodium dodecyl sulfate (SDS), ethylenediaminetetraacetic acid (EDTA), and polyethylene glycol (PEG) were purchased from Sigma-Aldrich (Oakville, ON, Canada). Bovine serum albumin (BSA), fetal bovine serum (FBS), Dulbecco’s modified eagle medium (DMEM), Roswell Park Memorial Institute (RPMI) 1640 medium, and penicillin/streptomycin were purchased from Wisent (St-Bruno, QC, Canada). J774 macrophage-like cells were obtained from the American Type Culture Collection (ATCC, Manassas, VA, USA). Bio-Rad Protein Assay kits were obtained from Bio-Rad Laboratories (Mississauga, ON, Canada). Lipoprint® HDL kits were obtained from Quantimetrix (Redondo Beach, CA, USA). Extra virgin olive oil (EVOO) was obtained from Atlas Olive Oils sarl (Casablanca, Morocco).
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