The largest database of trusted experimental protocols

7 protocols using cd11b pe cf594

1

Multiparametric Immunophenotyping of Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
For flow cytometric analysis the following monoclonal antibodies (Ab) were obtained from BD Biosciences (Heidelberg, Germany): CD3/CD19/CD20 APC‐H7, CD11b PE‐CF594, CD14 V450, CD16 APC, CD33 BV711, CD45 AF700, CD56 PE‐Cy5, HLA‐DR V500. For InFlow microscopic analysis, PE‐labeled CD3 mouse mAb (IgG1; BD Biosciences), unconjugated CD33 mouse mAb (IgG1; BD Biosciences) as well as PU.1 rabbit pAb (IgG; Santa Cruz Biotechnology, Dallas, TX) was used. Western blot analysis was performed using the following primary antibodies: PU.1 rabbit pAb (Santa Cruz Biotechnology), STAT3 rabbit pAb (Santa Cruz Biotechnology), histone H4 mouse mAb (IgG2a, Merck Millipore, Darmstadt, Germany), acetyl‐histone H4 rabbit pAb (Millipore). For immunofluorescence analysis tissue sections were stained with CD68 mouse mAb (IgG1; BD) and PU.1 rabbit pAb (IgG; Santa Cruz Biotechnology).
+ Open protocol
+ Expand
2

Flow Cytometry Analysis of γδ T Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Flow cytometry analysis of immunomagnetically isolated γδ T cells was performed to ascertain their purity. Briefly, a fraction of isolated γδ T cells were washed with 1× phosphate-buffered saline (PBS), cold fixed with 1% paraformaldehyde for 15 min at 4°C and stained for cell surface markers using the following conjugated antibodies procured from BD Biosciences: Vδ2 TCR-FITC (clone B6), CD56-APC R-700 (clone NCAM16.2), αβ TCR-PE (clone T10B9.1A-31), CD14-PE (clone M5E2), CD11b PE-CF594 (clone ICRF44), CD19-BV786 (clone SJ25C1), Vδ2 TCR-PE (clone B6), and Vδ1 TCR-PerCP-Vio 700 (clone REA173). The cells were incubated for 30 min at 4°C and washed with FACS buffer. The purity and distribution of Vδ2 and Vδ1 populations in isolated γδ T cells were confirmed by flow cytometry using FACS Aria III flow cytometer (BD Biosciences, USA) and analysis performed using FlowJo software (TreeStar, Ashland, USA). The purity of γδ T cells isolated from peripheral blood of three healthy individuals was 96.4 ± 1.07%. As the distribution of Vδ2 population was higher (88.2 ± 5.92%) in the isolated γδ T cells as compared to Vδ1 (7.03 ± 1.26%), these are henceforth referred to as Vγ9Vδ2 T cells (Supplementary Figure S1).
+ Open protocol
+ Expand
3

Quantification of Neutrophil Subsets

Check if the same lab product or an alternative is used in the 5 most similar protocols
400 μL of cells were pelleted and resuspended in 50 μL of FACS buffer (PBS, 5% FBS) containing FC block (CD16/32, Biolgened, cat. 101301, clone 93, 1:200). To quantify immature and mature neutrophils, the following antibodies were used: CD11b PE-CF594 (BD Biosceinces, cat. 562317, clone M1/70, 1:800), CXCR2 PE-Cy7 (Biolegend, cat. 149315, clone SA044G4, 1:200), SiglecF BV421 (Biolegend, cat. 155509, clone S170071, 1:200). 100,000-500,000 events were captured per sample. All flow data was analyzed using Flowjo V 10.7.1.
+ Open protocol
+ Expand
4

Flow Cytometric Analysis of Murine BMDM

Check if the same lab product or an alternative is used in the 5 most similar protocols
After the harvest of cell-free supernatants at 24 h, BMDM were washed and blocked with Fc block (Fc block CD16/CD32, AH Diagnostics). Then, fixable viability dye (FVD 780, AH Diagnostics) and surface staining (MHCII Alexa Fluor 700, F4/80 PE, CD80 eFluor 450, CD86 PE-Cy7, all AH Diagnostics; and CD11b PE-CF594, BD Biosciences) were performed. In addition, internal expression of iNOS Alexa Fluor 488 (AH Diagnostics) and arginase 1 (Arg1) allophycocyanin (R&D Systems) was determined following fixation with 2% paraformaldehyde and permeabilization with Perm buffer (AH Diagnostics). Flow cytometric analysis was performed on a Gallios flow cytometer, and Kaluza software (Beckman Coulter) was used for analysis (Supplemental Fig. 1B1E).
+ Open protocol
+ Expand
5

Immunophenotyping of Myeloid Cells in Dams

Check if the same lab product or an alternative is used in the 5 most similar protocols
Dams at 10.5 dpc and 18.5 dpc were euthanized and peripheral blood was obtained by cardiac puncture (n = 10 each). Peripheral leukocytes were incubated with the CD16/CD32 monoclonal antibody (mAb) (FcγIII/II receptor; BD Biosciences, San Jose, CA) followed by staining using CD11b-PECF594, Ly6G-APC-Cy7 and F4/80-PE mAbs (BD Biosciences), after which the cell suspensions underwent intracellular staining with either OVA-FITC antibody or rabbit IgG-FITC isotype control. Cells were resuspended in 500 μL of FACS buffer and sorted using a BD FACSAria cell sorter (BD Biosciences) and BD FACSDiva Software Version 6.1.3. The sorted CD11b+Ly6G+OVA+ or CD11b+F4/80+OVA+ cells were then resuspended with 200 μL of FACS buffer. Cytospin slides of sorted cells were prepared using Fisherbrand Superfrost microscope slides (Thermo Fisher Scientific) and a Shandon Cytospin 3 cytocentrifuge (Thermo Fisher Scientific) at 800 rpm for 5 min. After centrifugation, all slides were washed with 1X PBS and the cells were fixed with 4% paraformaldehyde for 20 min. After fixation, the slides were washed with 1X PBS, dried, and mounted using ProLong Diamond Antifade Mountant with DAPI. Images were obtained with an Olympus BX60 fluorescence microscope at 40x magnification with digital zoom.
+ Open protocol
+ Expand
6

Murine Retinal Cell Isolation and Characterization

Check if the same lab product or an alternative is used in the 5 most similar protocols
Mice were perfused transcardially under isoflurane anesthesia with phosphate-buffered saline (PBS) to flush vessels before euthanasia. After euthanasia, eyes were enucleated into ice-cold phosphate-buffered saline (PBS). The corneas, lenses and hyaloid vasculatures were removed and the retinas isolated immediately. To dissociate retinas into single cells, each retina was incubated in 1 ml of papain dissociation solution (Roche Diagnostics GmbH, REF#10108014001, Mannheim, Germany) prepared according to manufacturer’s protocol for 30 min in a 37 °C water bath. Single cell suspensions were washed with FACs buffer on ice and then incubated with primary antibody cocktails for 45 min at 4 °C in the dark. Antibodies used included CD45 Apc-eFluor780 (Invitrogen, Cat#47-0451-82, Waltham, MA, USA), Ly6C Percp/Cy5.5 (Biolegend, Cat#128012, San Diego, CA, USA), Ly6G (BV605 Biolegend, Cat#127639), CD11b PE-CF594 (BD Biosciences, Cat#562287, Franklin Lakes, NJ, USA), CD31 PE (Invitrogen, Cat#2114546) and Fixable viability Dye eFluor506 (Invitrogen, Cat# 65-0866-14). The cells were then washed with FACs buffer, resuspended and analyzed using BD FACSCelesta flow cytometer (BD Biosciences) and FlowJo™ v10.8 Software (BD Life Sciences, Franklin Lakes, NJ, USA). Gating of the different cell populations was performed as previously published [23 (link)].
+ Open protocol
+ Expand
7

Quantifying Immune Cell Populations in BAL

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cell suspension of BAL was centrifuged at 4 °C, 2,900 rpm for 10 min, and cell viability was determined by incubation with fixable viability dye (FVD) eFluor780 (eBiosciences) for 20 min. For subsequent flow cytometry (Gallios; Beckman Coulter), cells were fixed with 4% paraformaldehyde (PFA) and then incubated with Fc block (anti-mouse CD16/CD32; BD Biosciences) on ice for 20 min, followed by surface marker staining with anti-mouse Abs: F4/80 (PE; BD), CD11b (PE-CF594; BD), CD11c (PE-Cy7; eBiosciences), Ly6G (APC; BD), and Ly6C (V450; BD). The data were analyzed using Kaluza 1.2 (Beckman Coulter). The absolute numbers of different cell types were calculated based on the proportion of viable events analyzed by flow cytometry as related to the total number of viable cells per sample.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!