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Pd0325901

Manufactured by Selleck Chemicals
Sourced in United States, Germany, China, United Kingdom, Canada

PD0325901 is a cell-permeable small molecule that selectively inhibits the mitogen-activated protein kinase (MAPK) pathway by targeting MEK1/2. It is commonly used in cell culture research applications.

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235 protocols using pd0325901

1

Maintenance of Human and Mouse ESC Lines

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Human ESC lines H1 (Wi Cell), H9 (Wi Cell) and knockout cell lines were maintained in mTeSR1 (STEMCELL Technologies) on matrigel (Corning)-coated plates. Mouse ESC cell line OG2 with GFP controlled by Oct4 promoter, was kindly provided by Dr. Jiekai Chen. OG2 mESCs and knockout mESCs based on OG2 mESCs were maintained on feeder layers in mESC + 2iL medium (DMEM/ high glucose (Hyclone), 15% FBS (Gibco), NEAA (Gibco, 100×), GlutaMAX (Gibco, 100×), Sodium Pyruvate (Gibco, 100×), 1 μM PD0325901 (Selleck), 3 μM CHIR99021 (Selleck), 1000 units/mL mLIF). OG2 mESCs and knockout mESCs based on OG2 mESCs were maintained on gelatin (Millipore)-coated plate in mouse N2B27 + 2iL medium (50% DMEM/High glucose (Hyclone), 50% Knockout DMEM (Gibco), N2 (Gibco, 200×) + B27 (Gibco, 100×), NEAA (Gibco, 100×), GlutaMAX (Gibco, 100×), Sodium Pyruvate (Gibco, 100×), 1 μM PD0325901 (Selleck), 3 μM CHIR99021 (Selleck), 100 μM β-mercaptoethanol (Gibco), 1000 units mL−1 mLIF). All cell types were maintained at 5% CO2.
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2

Maintaining mESC Pluripotency via Starvation

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mESCs were serum (fetal bovine serum) and glucose starved for 24 h. Cells were cultured only with DMEM (0 g/L D-glucose, Invitrogen) with addition of 10ng/mL mouse LIF (EMD Millipore), 1 mM GSK inhibitor (CHIR99021, Selleckchem) and 1 mM MEK inhibitor (PD0325901, Selleckchem). To reverse starvation-induced effects, starvation media was removed from the culture after 24 h and mESCs were cultured with DMEM (4.5 g/L D-glucose, Invitrogen), supplemented with 20% ESC-qualified fetal bovine serum, 1mM sodium pyruvate, 1mM non-essential amino acids (NEAA), 1mM penicillin/streptomycin (all from Invitrogen), 0.1mM 2- b-mercaptoethanol (Sigma Aldrich), with addition of 10ng/mL mouse LIF (EMD Millipore), 1 mM GSK inhibitor (CHIR99021, Selleckchem) and 1 μM MEK inhibitor (PD0325901, Selleckchem).
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3

Establishment and Characterization of Melanoma Cell Lines

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1205Lu cells (donated by Dr. Meenhard Herlyn, Wistar Institute, Philadelphia, PA in 2005) were cultured in MCDB153 medium containing 2% FBS, 20% Leibovitz L-15 medium, with 5 μg/mL insulin. A375 cells (purchased from ATCC in 2005) were cultured in DMEM with 10% FBS. Cell lines were authenticated by sequencing at the NRAS and BRAF loci, and by STR analysis (completed July 2016). CRT cells were cultured in the same medium as parental cells with the addition of PLX4720 (1 μM) and PD0325901 (35 nM) (15 (link),16 (link)). These levels maintain the same RAF inhibitor to MEK inhibitor ratio as used for in vivo experiments. PLX4720 was provided by Dr. Gideon Bollag (Plexxikon Inc., Berkeley, CA). PD0325901, SCH772984, GSK461364, and BI 6727 were purchased from Selleck Chemicals (Houston, TX).
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4

Cell Viability Assay of Anti-Cancer Drugs

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The effect of PD0325901, trametinib, perifosine (SelleckChem, Houston, TX, USA) or DMF (FUJIFILM Wako) on cell viability was examined using the trypan blue stain exclusion assay as previously described [37 (link),51 (link)]. DLD-1, HT-29, LoVo, Colo-205, LoVo/PR, Colo-205/PR and LoVo/TR cells were seeded onto flat-bottom 96-well plates for 24 h. Next, DLD-1, HT-29, LoVo and Colo-205 cells were treated with various concentrations of PD0325901 or trametinib for 1, 3 or 5 days; combination treatment with PD0325901 or trametinib and perifosine or DMF for 3 days; and LoVo/PR, LoVo/TR and Colo-205/PR cells were treated with various concentrations of PD0325901 or trametinib with or without perifosine for 3 days. A 0.4% trypan blue solution was mixed with the cell cultures and loaded into a hemocytometer. The cell survival rate represented the survival ((unstained cells)/death (stained cells)) rate on each day.
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5

Investigating ERK/MAPK Signaling Modulators

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The reagents used in this study were as follows: MEK inhibitor PD0325901 (S1036) and GSK-3 inhibitor CHIR99021 (S2924) were purchased from Selleckchem (Houston, TX), ERK1/2 inhibitor SCH772984 (HY-50846) from MCE (Monmouth Junction, NJ), MG132 (M8699) from Sigma (St. Louis, MO) and Actinomycin D (HY-17559) from MCE(Monmouth Junction, NJ). The antibodies used in this study were as follows: Erk1/2 (4695), P-ERK1/2 (4370), E2F1 (3742) and SP1 (9389) from Cell Signaling Technology (Danvers, MA); DNMT1 (sc-20701) and DNMT3A (sc-20703) from Santa Cruz Biotechnology (Dallas, TX); UHRF1 (21402-1-AP) from Proteintech (Rosemont, IL); β-actin (M1210-2) from HUABIO (Cambridge, MA) and GAPDH (3B3) from Abmart (Berkeley Heights, NJ).
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6

Inhibition of BRAF and MEK signaling

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Inhibitors were purchased from Selleck Chem: BRAF inhibitor PLX4720 (cat# S1152), and MEK inhibitor PD0325901 (cat#S1036). BRAF inhibitor PLX4032 was purchased from Santa Cruz Biotechnology (cat# sc-364643)
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7

Overexpression of Pluripotency Factors

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Doxcyclin (Dox) and Jak inhibitor (Jaki) were purchased from Merck Millipore (Billierica, MA, USA). CHIR99021 and PD0325901 were purchased from SelleckChem (Houston, TX, USA). The LIF neutralizing antibody (LIFAb) was from R&D Systems. The retro- and lenti-viral vectors including pMXs-Nanog, and FUW- M2rtTA, and the viral packaging plasmids PUMVC, psPAX2 and pCMV-VSV-G (Stewart et al., 1992 (link)) were all obtained from Addgene (Cambridge, MA, USA). FUW-TetO-Esrrb and pMXs-Stat3C were described previously (Tang et al., 2012 (link), 2014 (link)). Nr5a2 cDNA was PCR amplified using primers (forward primer: 5′-AGTTAATTAAGGATCCATGTCTTCTAATTCAGATACTGGGG-3′ and reverse primer: 5′-ACTGTGCTGGCGGCCGCTTATGCTCTTTTGGCATGCAAC-3′) and cloned into linearized pMXs vectors (Cell Biolabs, San Diego, CA, USA) using the In-Fusion kit (Clontech Inc., Mountain View, CA, USA). Lenti- and retro-viruses were prepared with 293T cells according to the protocol from Addgene and filtered with 0.8 μm filters.
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8

Platelet Signaling Pathway Activation

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Rhodocytin was purified from Calloselasma rhodostoma venom as previously described 29. Horm collagen was from Takeda (Munich, Germany). Crosslinked CRP was from R. Farndale (Cambridge University, UK). The anti‐phosphotyrosine mAb 4G10 was from Upstate Biotechnology (TCS Biologicals, Buckingham, UK). Anti‐phospho‐Akt (Thr308), anti‐phospho‐p38 (Thr180/182), anti‐phospho‐Syk (Tyr352), anti‐phospho‐PLCγ2 (Tyr1217) and anti‐phospho‐GSK3α/β (Ser21/9) were from Cell Signaling Technology (New England Biolabs, Hitchin, UK). Anti‐Syk, anti‐phospho‐ERK1/2 (Thr202/Tyr204) and anti‐ERK2 were from Santa Cruz Biotechnology (Heidelberg, Germany). MK2206, CHIR‐99021 and PD0325901 were from Selleck Chemicals (Stratech, Newmarket, UK). PRT‐318 was provided by Portola Pharmaceuticals (San Francisco, CA, USA). All other reagents were from Sigma‐Aldrich (Poole, UK) or from previously named sources 30.
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9

Chondrocyte Differentiation via Icariin and ERK

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The progenitor chondrocytic cell line ATDC5 was purchased from the American Type Culture Collection (Manassas, VA, USA). Primary chondrocytes were obtained from the knee cartilage of 6 newborn (3 days old, 6–9 g) Sprague-Dawley (SD) rats of either sex (3 male and 3 female,). These SD rats were provided by the Experimental Animal Center (Tongji Hospital, Wuhan, China). All animals were maintained in the same housing conditions with free access to food and water (see below ‘Animal experiments’ section). Cells were cultured in Dulbecco's modified Eagle's medium/nutrient mixture F-12 (DMEM/F12) supplemented with 10% (v/v) fetal bovine serum (FBS) and 100 U/ml penicillin/streptomycin. Icariin was purchased from the Cayman Chemical Company (Ann Arbor, MI, USA). The ERK inhibitor, PD0325901, was obtained from Selleckchem (Houston, TX, USA).
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10

Isolating and Authenticating GBM Neurospheres

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The GIC lines were established by isolating neurosphere-forming cells from fresh surgical specimens of human GBM tissue between the years of 2005 through 2008, as described previously (18 (link)). Cells were authenticated by testing short tandem repeats (STR) using the Applied Biosystems AmpFISTR Identifier kit (Foster City, CA). The last authentication testing was done in March 2014. This study was approved by the institutional review board of The University of Texas MD Anderson Cancer Center (Houston, Texas). These GBM neurospheres were cultured in DMEM/F12 medium containing B27 supplement (Invitrogen, Carlsbad, CA), basic fibroblast growth factor, and epidermal growth factor (20 ng/ml each). The PI3K/mTOR dual inhibitor BEZ235 was from Selleck (Houston, Texas), DS-7423 was provided by Daiichi Sankyo Co., Ltd. (Tokyo, Japan), and PD-0325901 was from Selleck (Houston, Texas). For in vitro use, all inhibitors were dissolved in dimethyl sulfoxide (Sigma-Aldrich, St. Louis, MO).
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