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35 protocols using pictilisib

1

Investigating Stress Response Signaling Pathways

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The following inhibitors were purchased from Selleck Chemicals, catalogue numbers as follows: GSK2656157 (hearefter referred to as PERKi), S7033; pictilisib (GDC-0941), S1065; AZD8055, S1555; apitolisib (GDC-0980), S2696; selumetinib (AZD6244), S1008; GDC-0879, S1104; RO5126766, S7170; SCH772984, S7101. AKT inhibitor VIII (AKTi VIII) was purchased from Merck Millipore, catalogue number 124018. Concentrations were selected from a dilution series performed to ensure activity. Concentrations used for all experiments are shown in Table 1. Cells were treated with inhibitor 1 h prior to induction of ER-stress.

Inhibitors, major targets and concentrations used in this study.

Table 1
InhibitorMajor target(s)ConcentrationReference
GSK2656157PERK50 and 500 nM[42 (link)]
pictilisib (GDC-0941)PI3K500 nM[43 (link)]
AKT inhibitor VIIIAKT PH domain5 μM[44 (link)]
AZD8055MTOR500 nM[45 (link)]
apitolisib (GDC-0980)PI3K and MTOR500 nM[46 (link)]
selumetinib (AZD6244)MEK150 nM[47 (link)]
GDC-0879BRAF/CRAF50 nM[48 (link)]
RO5126766BRAF/CRAF/MEK50 nM[49 (link)]
SCH772984ERK1/250 nM[50 (link)]
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2

Anticancer Drug Screening Protocol

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5-Fluorouracil, oxaliplatin and irinotecan were obtained from the pharmacy of the University of Campania “Luigi Vanvitelli”. Cetuximab, panitumumab, SYM004, MM151, trastuzumab, pertuzumab and duligotuzumab antibodies were kindly provided by Merck, Amgen, Symphogen, Merrimack Pharmaceuticals, Roche and Genentech, respectively. Refametinib, a selective MEK 1/2 inhibitor was kindly provided by Bayer Italy; Pictilisib, a PI3Kα inhibitor and lapatinib were purchased from Selleckchem.
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3

Endothelial Smad4 and Klf4 Deletion

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Deletion of endothelial Smad4 (Smad4iΔEC) or Klf4 (Klf4iΔEC) was achieved by crossing Smad4fl/fl (Smad4tm2.1Cxd; Jackson laboratory) or Klf4fl/fl (B6.129S6-Klf4tm1Khk-Mutant Mouse Resource and Research Center) with Tx-inducible Cdh5-CreERT2 mice in a C57bl background. To obtain Smad4;Klf4iΔEC double-KO mice, we crossed Smad4iΔEC with Klf4fl/fl mice. Gene deletion was achieved by i.p. injections of 100 μg Tx (Sigma-Aldrich) into Smad4iΔEC, Klf4iΔEC, and Smad4iΔEC;Klf4iΔEC at postnatal days (P0–P2). Tx-injected Cre-negative littermates (fl/fl) were used as controls. The PI3K inhibitor Pictilisib (Selleckchem; 20 mg/kg/day) and CDK4/6 inhibitor Palbociclib (Selleckchem; 70 mg/kg/day) were administered i.p. at P4 and P5.
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4

Small Molecule Inhibitor Acquisition

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All small molecule inhibitors were obtained from Selleck Chemicals (Houston, TX, USA), these inhibitors include: Sorafenib tosylate (#S1040), PI3K inhibitors: LY294002 (#S1105), Buparlisib (#S2247), Pictilisib (#S1065), Alpelisib (#S2814) and Akt inhibitors MK2206 (#S1078), Ipatasertib (#S2808), Afuresertib (#S7521). All chemicals formulated by their suppliers’ recommendations.
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5

Comprehensive Kinase Inhibitor Protocol

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AT9283, AZD4547, AZD6244, BGJ398, crizotinib, pictilisib, ibrutinib, PD173074, ruxolitinib, TAE684, and gandotinib were all purchased from Selleck Chemicals, AUY922, dovitinib, everolimus, gefitinib, mubritinib, saracatinib, sunitinib, and ZSTK474 were from LC Laboratories, CH5424802 was from Active Biochem, SB525334 was from Tocris, and fedratinib was from Axon Medchem. The human gastric cancer cell line SNU-16 was obtained from ATCC and was cultured in RPMI 1640 medium supplemented with 10 % fetal bovine serum according to the manufacturer’s instructions.
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6

Stimulation and Labeling of Immune Cells

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Wild-type B cells, myc-tagged Glut1 B cells, or myc-tagged Glut1 CD8+ T cells were enriched from splenocytes using magnetic bead negative selection kits (Miltenyi Biotec). B cells were stimulated with 20 μg/mL LPS, and polyclonal CD8+ T cells were stimulated with plate-bound anti-CD3/CD28 (1 μg/mL) supplemented with 100 IU/mL interleukin-2 (IL-2) (Adams et al., 2016 (link)). For P14 CD8+ T cells, bulk splenocytes were activated with gp33 peptide (1 μg/mL) as previously described (Lin et al., 2016 (link)). For switched memory B cells, CD23+, IgD−, IgM−, and lineage-negative (CD4, CD8, and Gr1) cells were sorted from bulk splenocytes and then stimulated with LPS (20 μg/mL). Lymphocytes were labeled with CellTrace Violet (CTV) prior to stimulation. Where indicated, cells were treated with the following drugs: idelalisib (GS-1101, Selleckchem, 1 μM), pictilisib (GDC-0941, Selleckchem, 1 μM), LY294002 (Cell Signaling Technology, 2.5–5 μM), and Blebbistatin (Abcam, 20 μM).
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7

Antibody Labeling and Cell Signaling

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All primary antibodies used are listed in Supplementary Table 2. Cy3- and horseradish peroxidase-conjugated secondary antibodies were all from Jackson Immunochemicals (LABNET OY, Helsinki, Finland) and Alexa488-conjugated secondary antibodies were from Invitrogen. TRITC-Phalloidin and 2-(4-amidinophenyl)-1H -indole-6-carboxamidine were purchased from Sigma-Aldrich (Merck, Helsinki, Finland). Hygromycin B and Puromycin were from Thermo Fisher Scientific (Helsinki, Finland). dimethyl sulfoxide was from Sigma-Aldrich. The MEK inhibitor PD98059 was from LC Laboratories (Woburn, MA, USA). The PI (3) K inhibitor Pictilisib was from Selleck Chemicals (SMS Gruppen, Rungsted, Denmark).
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8

Radiosynthesis of [11C]-Pictilisib

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The precursor pictilisib (Figure 2) was purchased from Selleck Chemicals (Houston, TX, USA). Acetonitrile, ethyl alcohol, and dimethyl sulfoxide were purchased from Sigma-Aldrich (St. Louis, MO, USA) or Fisher Scientific (Pittsburgh, PA, USA). The water used refers to ultrapure water. The filters used to sterilize the PET tracer solution were Millex-GP 0.22 µm (Millipore, Inc., Bedford, MA, USA). A reference standard [12C]-pictilisib was synthesized. Radiolabeling of [11C]-pictilisib was performed with a radiosynthesis module (GE TraceLab FXC-Pro®; GE Healthcare, Brussels, Belgium). The reaction was stirred and heated to 65°C for 5 min and then cooled to room temperature quickly using liquid nitrogen. The reaction mixture was purified by semipreparative high-performance liquid chromatography (HPLC) (column: Phenomenex Luna 5 µm C18 (2) 100A; 250 × 10 mm; mobile phase: EtOH/H2O: 43/57; flow rate: 2.8 ml/min; λ = 254 nm). In short, the mixture was diluted with 600 μL of 43% ethanol and then injected into the HPLC loop. The product was passed through a sterile 0.22 µm filter and collected into a sterile vial. Subsequently, the product was analyzed through analytical HPLC (column: Phenomenex Luna 5 µm C18(2) 100A; 250 × 10 mm; mobile phase: EtOH/H2O: 43/57; flow rate: 2.8 ml/min) by coinjecting with standard methyl-pictilisib into the analytical HPLC.
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9

Molecular Inhibitors for Tumor Spheroid Assay

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Trametinib, PD0325901, selumetinib, sorafenib, AZ628, GDC0994, ulixertinib, dactolisib, PI-103, GSK1059615, and pictilisib were purchased from Selleckchem (Houston, TX). Stock solutions of these molecular inhibitors were prepared according to the manufacturer's instructions. Except for dactolisib that was dissolved in dimethylformamide, other compounds were dissolved in dimethyl sulfoxide (DMSO). Stock solutions of the inhibitors were stored in −80 °C. The inhibitors were tested against tumor spheroids according to the protocol we described previously [21] (link), [22] (link).
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10

Stimulation of Rat Pulmonary Artery Smooth Muscle Cells

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Human embryonic kidney (HEK) 293 cells were obtained from American Type Culture Collection (ATCC, Manassas) and maintained in Dulbecco's modified Eagle's medium (DMEM, Invitrogen) supplemented with 10% fetal bovine serum (FBS, Invitrogen). Rat PASMC (RPASMC) was isolated and cultured in DMEM supplemented with 10% FBS as reported previously (Zeng et al. 2015).
RPASMCs were starved for 12 h with DMEM supplemented with 0.2% FBS for 12 h and treated with cytokines and growth factors (ANGII [200 ng/mL], ET‐1 [25 ng/mL], FGF2 [30 ng/mL], IGF1 [30 ng/mL], PDGF‐AA [30 ng/mL], PDGF‐BB [30 ng/mL], TGF‐β [20 ng/mL], VEGF [30 ng/mL], and FBS [10%], R&D) for specific time periods (0 h, 2 h, 4 h, 6 h, 12 h, 24 h). For kinase inhibition studies, before being stimulated with growth factors, starved cells were pretreated with corresponding inhibitors (imatinib [5 μmol/L], U0126 [10 μmol/L], SH‐4‐54 [5 μmol/L], enzastaurin [5 μmol/L], pictilisib [1 μmol/L], Selleck) for 0.5 h.
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